Guide to the Human Genome
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Name: PIH1D2 Sequence: fasta or formatted (288aa) NCBI GI: 130499472
Description:

PIH1 domain containing 2 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {315aa} PIH1 domain containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         13           2
 C cysteine            2.1          6           1
 D aspartate           5.2         15           2
 E glutamate           8.3         24           2
 F phenylalanine       2.8          8           1
 G glycine             3.5         10           1
 H histidine           2.4          7           1
 I isoleucine          7.3         21           1
 K lysine              9.0         26           2
 L leucine            11.5         33           3
 M methionine          3.1          9           1
 N asparagine          2.4          7           1
 P proline             5.9         17           1
 Q glutamine           8.0         23           3
 R arginine            2.8          8           2
 S serine              7.3         21           2
 T threonine           6.6         19           2
 V valine              4.9         14           1
 W tryptophan          0.7          2           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PIH1 domain containing 2 isoform 2 
PIH1D2                0.940   PIH1 domain containing 2 isoform 1 
PIH1D1                0.040   NOP17 
SDPR                  0.015   serum deprivation response protein 
ATF7IP                0.009   activating transcription factor 7 interacting protei...
GBF1                  0.009   golgi-specific brefeldin A resistant guanine nucleoti...
CCDC21                0.009   coiled-coil domain containing 21 
SHROOM2               0.007   apical protein of Xenopus-like 
MYO9A                 0.005   myosin IXA 
CENPF                 0.005   centromere protein F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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