Guide to the Human Genome
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Name: PIH1D2 Sequence: fasta or formatted (315aa) NCBI GI: 20270333
Description:

PIH1 domain containing 2 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {288aa} PIH1 domain containing 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         12           2
 C cysteine            1.9          6           1
 D aspartate           5.4         17           2
 E glutamate           8.3         26           2
 F phenylalanine       2.5          8           1
 G glycine             2.9          9           1
 H histidine           2.5          8           1
 I isoleucine          8.3         26           2
 K lysine              9.2         29           2
 L leucine            12.1         38           3
 M methionine          3.5         11           1
 N asparagine          2.5          8           1
 P proline             5.7         18           1
 Q glutamine           7.0         22           3
 R arginine            2.9          9           2
 S serine              7.0         22           2
 T threonine           7.0         22           2
 V valine              5.1         16           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PIH1 domain containing 2 isoform 1 
PIH1D2                0.860   PIH1 domain containing 2 isoform 2 
PIH1D1                0.043   NOP17 
C14orf104             0.040   kintoun isoform 2 
C14orf104             0.040   kintoun isoform 1 
SDPR                  0.015   serum deprivation response protein 
MYH15                 0.010   myosin, heavy polypeptide 15 
CXorf41               0.010   hypothetical protein LOC139212 
ATF7IP                0.008   activating transcription factor 7 interacting protei...
GBF1                  0.008   golgi-specific brefeldin A resistant guanine nucleoti...
CCDC21                0.008   coiled-coil domain containing 21 
SHROOM2               0.007   apical protein of Xenopus-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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