Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ME3 Sequence: fasta or formatted (604aa) NCBI GI: 62420882
Description:

mitochondrial malic enzyme 3

Referenced in:

TCA Cycle

Other entries for this name:
alt mRNA [604aa] mitochondrial malic enzyme 3
alt mRNA [604aa] mitochondrial malic enzyme 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         52           2
 C cysteine            1.8         11           1
 D aspartate           5.0         30           2
 E glutamate           5.5         33           2
 F phenylalanine       4.1         25           1
 G glycine             8.1         49           2
 H histidine           2.8         17           1
 I isoleucine          6.0         36           2
 K lysine              5.5         33           2
 L leucine            10.4         63           2
 M methionine          2.5         15           1
 N asparagine          3.8         23           2
 P proline             5.8         35           2
 Q glutamine           3.8         23           2
 R arginine            5.5         33           2
 S serine              4.0         24           1
 T threonine           5.5         33           1
 V valine              6.8         41           3
 W tryptophan          0.8          5           1
 Y tyrosine            3.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial malic enzyme 3 
ME3                   1.000   mitochondrial malic enzyme 3 
ME3                   1.000   mitochondrial malic enzyme 3 
ME1                   0.688   cytosolic malic enzyme 1 
ME2                   0.526   malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo...
CDCA7L                0.007   cell division cycle associated 7-like isoform 3 [Ho...
CDCA7L                0.007   cell division cycle associated 7-like isoform 2 [Ho...
CDCA7L                0.007   cell division cycle associated 7-like isoform 1 [Hom...
LOC100293274          0.005   PREDICTED: similar to hCG1994130 
LOC100290882          0.005   PREDICTED: hypothetical protein XP_002347835 
LOC100288781          0.005   PREDICTED: hypothetical protein XP_002343613 
MED12L                0.004   mediator of RNA polymerase II transcription, subunit...
GGN                   0.004   gametogenetin 
ATP6V0D1              0.004   ATPase, H+ transporting, lysosomal, V0 subunit d1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press