Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 4504879

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504879 killer cell lectin-like receptor subfamily B, member
1 [Homo sapiens]
         (225 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504879 killer cell lectin-like receptor subfamily B, member ...   461   e-130
gi|7705574 killer cell lectin-like receptor subfamily F, member ...   100   1e-21
gi|47717096 killer cell lectin-like receptor subfamily G, member...    76   2e-14
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ...    72   4e-13
gi|194018501 C-type lectin domain family 12, member B isoform 1 ...    69   2e-12
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ...    68   7e-12
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ...    67   9e-12
gi|167614498 killer cell lectin-like receptor subfamily D, membe...    64   1e-10
gi|4504889 killer cell lectin-like receptor subfamily D, member ...    64   1e-10
gi|10281669 C-type lectin, superfamily member 5 [Homo sapiens]         64   1e-10
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...    62   4e-10
gi|7669499 killer cell lectin-like receptor subfamily D, member ...    60   1e-09
gi|4505501 oxidized low density lipoprotein (lectin-like) recept...    60   2e-09
gi|47717094 killer cell lectin-like receptor subfamily C, member...    60   2e-09
gi|4504881 killer cell lectin-like receptor subfamily C, member ...    60   2e-09
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi...    59   3e-09
gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens]         59   4e-09
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...    58   7e-09
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]     57   2e-08
gi|153252029 C-type lectin domain family 1, member B isoform a [...    55   5e-08
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   54   8e-08
gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]       54   8e-08
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    54   1e-07
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    54   1e-07
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    54   1e-07
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    54   1e-07
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    54   1e-07
gi|18641360 collectin sub-family member 12 [Homo sapiens]              54   1e-07
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]    54   1e-07
gi|153252048 C-type lectin domain family 1, member B isoform b [...    53   2e-07

>gi|4504879 killer cell lectin-like receptor subfamily B, member 1
           [Homo sapiens]
          Length = 225

 Score =  461 bits (1186), Expect = e-130
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGLSV 60
           MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGLSV
Sbjct: 1   MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGLSV 60

Query: 61  SVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLA 120
           SVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLA
Sbjct: 61  SVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLA 120

Query: 121 DCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEI 180
           DCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEI
Sbjct: 121 DCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEI 180

Query: 181 RGDAKENSCISISQTSVYSEYCSTEIRWICQKELTPVRNKVYPDS 225
           RGDAKENSCISISQTSVYSEYCSTEIRWICQKELTPVRNKVYPDS
Sbjct: 181 RGDAKENSCISISQTSVYSEYCSTEIRWICQKELTPVRNKVYPDS 225


>gi|7705574 killer cell lectin-like receptor subfamily F, member 1
           [Homo sapiens]
          Length = 231

 Score =  100 bits (249), Expect = 1e-21
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)

Query: 1   MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCA--GIILLVLVVTGL 58
           M  +  Y  LN+ +     + +     +D      W++  L +S    GI+ L L+   L
Sbjct: 1   MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLIL 60

Query: 59  SVSVTSLI--QKSSIEKCSV--DIQQSRNKTTERPGLLN--------------CPIYWQQ 100
            VS   L+  QK S    +   D    +     R  + N              C   W +
Sbjct: 61  LVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLK 120

Query: 101 LREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSL 160
            + KC  FS+ +  W++S   C  ++S LL+I D+ E+   Q  +R    + WIGLNF+ 
Sbjct: 121 YQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYV-WIGLNFTS 179

Query: 161 SEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQ 211
            +  W W++GS ++S    I+G AKENSC +I ++ ++SE CS+  +WICQ
Sbjct: 180 LKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWICQ 230


>gi|47717096 killer cell lectin-like receptor subfamily G, member 1
           [Homo sapiens]
          Length = 189

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 38/218 (17%)

Query: 1   MDQQAIYAELNLPT------DSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLV 54
           M    IY+ L LPT      D GP+  S SS P   C           L    + LL  V
Sbjct: 1   MTDSVIYSMLELPTATQAQNDYGPQQKSSSSRPSCSC-----------LVAIALGLLTAV 49

Query: 55  VTGLSVSVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNP 114
           +  + +    L Q S+   C+                 +CP  W +    C  FS     
Sbjct: 50  LLSVLLYQWILCQGSNYSTCA--------------SCPSCPDRWMKYGNHCYYFSVEEKD 95

Query: 115 WNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLN 174
           WN+SL  C  ++S LL+I D  E+   Q  + +     WIGL    +   W+W +GS LN
Sbjct: 96  WNSSLEFCLARDSHLLVITDNQEMSLLQVFLSE--AFCWIGLR---NNSGWRWEDGSPLN 150

Query: 175 SNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQK 212
            +   I  ++   +C +I++  + +  C   + W+C+K
Sbjct: 151 FS--RISSNSFVQTCGAINKNGLQASSCEVPLHWVCKK 186


>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
           [Homo sapiens]
          Length = 247

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 27/234 (11%)

Query: 7   YAELNLPTDSGPESSSPSSLPRDVCQGSP-WHQFALKLSCAGIILLVL-VVTGLSVSVTS 64
           Y +L+  + S    +  S   +  C  SP W   A+ L    +++LV+ VV G      S
Sbjct: 15  YTQLHFDSQSNTRIAVVSE--KGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIWRS 72

Query: 65  LIQKSSIE----------------KCSVDIQQSRNKTTERPGLLN--CPIYWQQLREKCL 106
               +++E                + S++   +  K  +  G+L+  CP  W    + C 
Sbjct: 73  NSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCY 132

Query: 107 LFSHTVNPWNNSLADCSTKESSLLLIRDKDEL-IHTQNLIRDKAILFWIGLNFSLSEKNW 165
           LFS ++N W+ S   C    S+LL I   +EL    + +       FWIGL+   +E  W
Sbjct: 133 LFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPW 192

Query: 166 KWINGSFLNSNDLEIRGDAKEN----SCISISQTSVYSEYCSTEIRWICQKELT 215
            W +GS  +SN  +IR  A +     +C+ I  + +Y + CS     IC+K+ +
Sbjct: 193 LWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFS 246


>gi|194018501 C-type lectin domain family 12, member B isoform 1
           [Homo sapiens]
          Length = 276

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 94  CPIYWQQLREKCLLFS-HTVNPWNNSLADCSTKESSLLLIRDKDE--LIHTQNLIRDKAI 150
           CP  WQ  +  C  F+ +    W NS  DC  K S+L+ I   +E   + +Q L+     
Sbjct: 143 CPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFS-- 200

Query: 151 LFWIGLNFSLSEKNWKWINGS-----FLNSNDLEIRGDAKENSCISISQTSVYSEYCSTE 205
            FW+GL++  S ++W W +GS       ++ +L+    +K   C    + ++Y   CS E
Sbjct: 201 FFWLGLSWDSSGRSWFWEDGSVPSPSLFSTKELDQINGSK--GCAYFQKGNIYISRCSAE 258

Query: 206 IRWICQKELTPVRNK 220
           I WIC+K   PV+ +
Sbjct: 259 IFWICEKTAAPVKTE 273


>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
           [Homo sapiens]
          Length = 201

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)

Query: 7   YAELNLPTDSGPESSSPSSLPRDVCQGSP-WHQFALKLSCAGIILLVLVVTGLSVSVTSL 65
           Y +L+  + S    +  S   +  C  SP W   A+ L   GI+ LV++V  + +    +
Sbjct: 15  YTQLHFDSQSNTRIAVVSE--KGSCAASPPWRLIAVIL---GILCLVILVIAVVLGTMGV 69

Query: 66  IQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLADCSTK 125
           +                           CP  W    + C LFS ++N W+ S   C   
Sbjct: 70  LSSP------------------------CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQL 105

Query: 126 ESSLLLIRDKDEL-IHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEIRGDA 184
            S+LL I   +EL    + +       FWIGL+   +E  W W +GS  +SN  +IR  A
Sbjct: 106 GSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTA 165

Query: 185 KEN----SCISISQTSVYSEYCSTEIRWICQKELT 215
            +     +C+ I  + +Y + CS     IC+K+ +
Sbjct: 166 TQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFS 200


>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
           [Homo sapiens]
          Length = 168

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDEL-IHTQNLIRDKAILF 152
           CP  W    + C LFS ++N W+ S   C    S+LL I   +EL    + +       F
Sbjct: 41  CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 100

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKEN----SCISISQTSVYSEYCSTEIRW 208
           WIGL+   +E  W W +GS  +SN  +IR  A +     +C+ I  + +Y + CS     
Sbjct: 101 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYS 160

Query: 209 ICQKELT 215
           IC+K+ +
Sbjct: 161 ICEKKFS 167


>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 18/174 (10%)

Query: 47  GIILLVLVVTGLSVSVTSLIQKSSIEKC-----SVDIQQSRNKTTERPGLLNCPIYWQQL 101
           GII L L+ T L + + +   K SIE       ++++Q+  +         +C   W   
Sbjct: 17  GIICLSLMAT-LGILLKNSFTKLSIEPAFTPGPNIELQKDSD-------CCSCQEKWVGY 68

Query: 102 REKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLS 161
           R  C   S     WN S   C++++SSLL +++ DEL    + +      +WIGL++S  
Sbjct: 69  RCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL----DFMSSSQQFYWIGLSYSEE 124

Query: 162 EKNWKWINGSFLNSNDLEIRGDAKENSCISISQT-SVYSEYCSTEIRWICQKEL 214
              W W NGS L+             +CI+ +   +   E C  + R+IC+++L
Sbjct: 125 HTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQL 178


>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 18/174 (10%)

Query: 47  GIILLVLVVTGLSVSVTSLIQKSSIEKC-----SVDIQQSRNKTTERPGLLNCPIYWQQL 101
           GII L L+ T L + + +   K SIE       ++++Q+  +         +C   W   
Sbjct: 17  GIICLSLMAT-LGILLKNSFTKLSIEPAFTPGPNIELQKDSD-------CCSCQEKWVGY 68

Query: 102 REKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLS 161
           R  C   S     WN S   C++++SSLL +++ DEL    + +      +WIGL++S  
Sbjct: 69  RCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL----DFMSSSQQFYWIGLSYSEE 124

Query: 162 EKNWKWINGSFLNSNDLEIRGDAKENSCISISQT-SVYSEYCSTEIRWICQKEL 214
              W W NGS L+             +CI+ +   +   E C  + R+IC+++L
Sbjct: 125 HTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQL 178


>gi|10281669 C-type lectin, superfamily member 5 [Homo sapiens]
          Length = 188

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 6/120 (5%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFW 153
           CP  W+  + +C   S + + WN S   C  K S+L ++   ++L   Q++    A  ++
Sbjct: 71  CPKDWEFYQARCFFLSTSESSWNESRDFCKGKGSTLAIVNTPEKLKFLQDI--TDAEKYF 128

Query: 154 IGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVY-SEYCSTEIRWICQK 212
           IGL +   EK W+WIN S  N N   +    +  +C +I  T  + +  C    R IC+K
Sbjct: 129 IGLIYHREEKRWRWINNSVFNGN---VTNQNQNFNCATIGLTKTFDAASCDISYRRICEK 185


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 15/217 (6%)

Query: 17  GPESSSPSSLPRDVCQGSPWHQFALKLSCAGIIL--------LVLVVTGLSVSVTSLIQK 68
           GP S  PSSL ++  +    +Q   +L  A   L        +   +T L  +V  L +K
Sbjct: 49  GPVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEK 108

Query: 69  SSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESS 128
           S +++   ++  +R K        +CP  W   +  C   S++   W++S+  C    + 
Sbjct: 109 SKLQEIYQEL--TRLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQ 166

Query: 129 LLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS 188
           L++I+  +E    Q          W+GL+    E  W+W++GS L+ +        + N+
Sbjct: 167 LVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN 226

Query: 189 -----CISISQTSVYSEYCSTEIRWICQKELTPVRNK 220
                C   S +      C  +  WIC+K     R++
Sbjct: 227 SGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRDE 263


>gi|7669499 killer cell lectin-like receptor subfamily D, member 1
           isoform 2 [Homo sapiens]
          Length = 148

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +C   W   R  C   S     WN S   C++++SSLL +++ DEL    + +      +
Sbjct: 29  SCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL----DFMSSSQQFY 84

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENSCISISQT-SVYSEYCSTEIRWICQ 211
           WIGL++S     W W NGS L+             +CI+ +   +   E C  + R+IC+
Sbjct: 85  WIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICK 144

Query: 212 KEL 214
           ++L
Sbjct: 145 QQL 147


>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
           1 [Homo sapiens]
          Length = 273

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 4/124 (3%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFW 153
           CP  W    E C LFS     W  S   C + ++ LL I    +L   Q  I   +  FW
Sbjct: 144 CPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPFW 203

Query: 154 IGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKE----NSCISISQTSVYSEYCSTEIRWI 209
           +GL+       W W +GS L  +   +RG   +     +C  I + +VY+E C      I
Sbjct: 204 MGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILAAFSI 263

Query: 210 CQKE 213
           CQK+
Sbjct: 264 CQKK 267


>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
           isoform NKG2-A [Homo sapiens]
          Length = 233

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 20/216 (9%)

Query: 2   DQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGLSVS 61
           +Q+  YAELNL   S     +  +     C+  P     L +   GII L+L+ + +++ 
Sbjct: 35  EQEITYAELNLQKASQDFQGNDKTYH---CKDLPSAPEKLIVGILGIICLILMASVVTIV 91

Query: 62  V--TSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSL 119
           V  ++LIQ+ +    +   Q++R+         +CP  W      C         W  SL
Sbjct: 92  VIPSTLIQRHNNSSLNTRTQKARHCG-------HCPEEWITYSNSCYYIGKERRTWEESL 144

Query: 120 ADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLE 179
             C++K SSLL I D +E +   ++I   +   WIG+  + S   W  +NG        E
Sbjct: 145 LACTSKNSSLLSI-DNEEEMKFLSIISPSS---WIGVFRNSSHHPWVTMNGLAFKH---E 197

Query: 180 IR-GDAKENSCISISQTSVYSEYCSTEIRWICQKEL 214
           I+  D  E +C  +    + S  C + I + C+ +L
Sbjct: 198 IKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL 233


>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
           isoform NKG2-A [Homo sapiens]
          Length = 233

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 20/216 (9%)

Query: 2   DQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGLSVS 61
           +Q+  YAELNL   S     +  +     C+  P     L +   GII L+L+ + +++ 
Sbjct: 35  EQEITYAELNLQKASQDFQGNDKTYH---CKDLPSAPEKLIVGILGIICLILMASVVTIV 91

Query: 62  V--TSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSL 119
           V  ++LIQ+ +    +   Q++R+         +CP  W      C         W  SL
Sbjct: 92  VIPSTLIQRHNNSSLNTRTQKARHCG-------HCPEEWITYSNSCYYIGKERRTWEESL 144

Query: 120 ADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLE 179
             C++K SSLL I D +E +   ++I   +   WIG+  + S   W  +NG        E
Sbjct: 145 LACTSKNSSLLSI-DNEEEMKFLSIISPSS---WIGVFRNSSHHPWVTMNGLAFKH---E 197

Query: 180 IR-GDAKENSCISISQTSVYSEYCSTEIRWICQKEL 214
           I+  D  E +C  +    + S  C + I + C+ +L
Sbjct: 198 IKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL 233


>gi|169234653 NKG2-D type II integral membrane protein [Homo
           sapiens]
          Length = 216

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFW 153
           CP  W   +  C  F      W  S A C ++ +SLL +  K++    Q+L++      W
Sbjct: 99  CPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKED----QDLLKLVKSYHW 154

Query: 154 IGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQK 212
           +GL    +  +W+W +GS L+ N L I    K +  +  S    Y E CST   +IC +
Sbjct: 155 MGLVHIPTNGSWQWEDGSILSPNLLTIIEMQKGDCALYASSFKGYIENCSTPNTYICMQ 213


>gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens]
          Length = 149

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 11/123 (8%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAIL-- 151
           CP  W   + KC  FS     WN+S  +CST+ + L +I + +E+    N +R       
Sbjct: 35  CPYDWIGFQNKCYYFSKEEGDWNSSKYNCSTQHADLTIIDNIEEM----NFLRRYKCSSD 90

Query: 152 FWIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQ 211
            WIGL  +   +  +W++G+   +    +RG      C  +S     +  C TE +WIC+
Sbjct: 91  HWIGLKMA-KNRTGQWVDGATF-TKSFGMRG---SEGCAYLSDDGAATARCYTERKWICR 145

Query: 212 KEL 214
           K +
Sbjct: 146 KRI 148


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 7/171 (4%)

Query: 55  VTGLSVSVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLLFSHTVNP 114
           +T L  +V  L +KS +++   ++ Q +    ER    +CP  W   +  C   S++   
Sbjct: 164 LTELKAAVGELPEKSKLQEIYQELTQLK-AAVERL-CRHCPKDWTFFQGNCYFMSNSQRN 221

Query: 115 WNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLN 174
           W++S+  C    + L++I+  +E    Q          W+GL+    E  W+W++GS L+
Sbjct: 222 WHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLS 281

Query: 175 SNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIRWICQKELTPVRNK 220
            +        + N+     C   S +      C  +  WIC+K     R++
Sbjct: 282 PSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRDE 332


>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
          Length = 241

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIR--DKAIL 151
           CP  W Q RE C   S   + W+ S  +C  + S+LL I  K+E+      +R    +  
Sbjct: 113 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD 172

Query: 152 FWIGLNFSLSEKNWKWINGSFLNSNDLEI-RGDAKENSCISISQTSVYSEYCSTEIRWIC 210
           +W+GL+       W W +GS  +   L   R  +    C  +   S+ S  CST   +IC
Sbjct: 173 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC 232

Query: 211 QK 212
           +K
Sbjct: 233 EK 234


>gi|153252029 C-type lectin domain family 1, member B isoform a
           [Homo sapiens]
          Length = 229

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 38/235 (16%)

Query: 1   MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCAGIILLVLVVTGL-S 59
           M  +  Y  LN+ T        P+ +       S W   AL L    +IL V +V GL +
Sbjct: 1   MQDEDGYITLNIKT------RKPALISVGSASSSWWRVMALIL----LILCVGMVVGLVA 50

Query: 60  VSVTSLIQKSSIEK----------------CSVDIQQSRNKTTERPGLLN-CPIYWQQLR 102
           + + S++Q++ ++                 C   ++QS  K T +    + C   W+   
Sbjct: 51  LGIWSVMQRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYG 110

Query: 103 EKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQ---NLIRDKAILFWIGLNFS 159
           + C  F      W  S   C+   ++LL I +++ + + +   +LIR      W+GL+  
Sbjct: 111 DSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLIR------WVGLSRQ 164

Query: 160 LSEKNWKWINGSFLNSNDLEIRGDAKEN-SCISISQTSVYSEYCSTEIRWICQKE 213
            S + WKW +GS ++ N  E   D K N +C       ++  +C  +   +C+++
Sbjct: 165 KSNEVWKWEDGSVISENMFEFLEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERK 219


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 16/183 (8%)

Query: 45  CAGIILLVLVVTGLSVSVTSLIQKSSIEKCSVDIQQSR------NKTTERPGLLN----C 94
           C G   LVL +   ++    L+Q S +   S+  +QSR      N T  +  +      C
Sbjct: 37  CLGHGPLVLQLLSFTLLAGLLVQVSKVPS-SISQEQSRQDAIYQNLTQLKAAVERLCHPC 95

Query: 95  PIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWI 154
           P  W   +  C   S++   W++S+  C    + L++I+  +E    Q          W+
Sbjct: 96  PWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWM 155

Query: 155 GLNFSLSEKNWKWINGSFLNSNDLEI--RGDAK---ENSCISISQTSVYSEYCSTEIRWI 209
           GL+    E  W+W++GS L  +  +   RG+     E  C   S      + C+    WI
Sbjct: 156 GLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWI 215

Query: 210 CQK 212
           C+K
Sbjct: 216 CKK 218


>gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]
          Length = 191

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 22/166 (13%)

Query: 48  IILLVLVVTGLSVSVTSLIQKSSIEKCSVDIQQSRNKTTERPGLLNCPIYWQQLREKCLL 107
           I+ L ++V G+ V+  S I+ +  ++ SV +Q +            CP  W   + KC  
Sbjct: 42  IMFLTIIVCGM-VAALSAIRANCHQEPSVCLQAA------------CPESWIGFQRKCFY 88

Query: 108 FSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAIL-FWIGLNFSLSEKNWK 166
           FS     W +S   C ++++ L  +    EL     L+R K     WIGL+    +  WK
Sbjct: 89  FSDDTKNWTSSQRFCDSQDADLAQVESFQEL---NFLLRYKGPSDHWIGLSREQGQP-WK 144

Query: 167 WINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQK 212
           WING+   +    I G      C  ++     S    TE +WIC K
Sbjct: 145 WINGTEW-TRQFPILG---AGECAYLNDKGASSARHYTERKWICSK 186


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +CP  W   +  C   S++   W++S+  C    + L++I+  +E    Q          
Sbjct: 221 HCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS 280

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIR 207
           W+GL+    E  W+W++GS L+ +        + N+     C   S +      C  +  
Sbjct: 281 WMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNY 340

Query: 208 WICQKELTPVRNK 220
           WIC+K     R++
Sbjct: 341 WICKKPAACFRDE 353


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +CP  W   +  C   S++   W++S+  C    + L++I+  +E    Q          
Sbjct: 243 HCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS 302

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIR 207
           W+GL+    E  W+W++GS L+ +        + N+     C   S +      C  +  
Sbjct: 303 WMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNY 362

Query: 208 WICQKELTPVRNK 220
           WIC+K     R++
Sbjct: 363 WICKKPAACFRDE 375


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +CP  W   +  C   S++   W++S+  C    + L++I+  +E    Q          
Sbjct: 216 HCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS 275

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIR 207
           W+GL+    E  W+W++GS L+ +        + N+     C   S +      C  +  
Sbjct: 276 WMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNY 335

Query: 208 WICQKELTPVRNK 220
           WIC+K     R++
Sbjct: 336 WICKKPAACFRDE 348


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +CP  W   +  C   S++   W++S+  C    + L++I+  +E    Q          
Sbjct: 244 HCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS 303

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIR 207
           W+GL+    E  W+W++GS L+ +        + N+     C   S +      C  +  
Sbjct: 304 WMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNY 363

Query: 208 WICQKELTPVRNK 220
           WIC+K     R++
Sbjct: 364 WICKKPAACFRDE 376


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 93  NCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILF 152
           +CP  W   +  C   S++   W++S+  C    + L++I+  +E    Q          
Sbjct: 267 HCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS 326

Query: 153 WIGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENS-----CISISQTSVYSEYCSTEIR 207
           W+GL+    E  W+W++GS L+ +        + N+     C   S +      C  +  
Sbjct: 327 WMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNY 386

Query: 208 WICQKELTPVRNK 220
           WIC+K     R++
Sbjct: 387 WICKKPAACFRDE 399


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 13/142 (9%)

Query: 82  RNKTTERPGLLNCPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLI--RDKDELI 139
           +N+ T  P    CP +W+   +KC  FS     + ++   C  K S L+ I  R++ + I
Sbjct: 595 QNEPTPAPEDNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWI 654

Query: 140 HTQNLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDLEI-------RGDAKENSCISI 192
             Q + R+     WIGL  S  E  WKW++G+  +  + +         G      C  +
Sbjct: 655 KKQMVGRES---HWIGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGL 711

Query: 193 SQTSVYSEY-CSTEIRWICQKE 213
                ++++ C     +IC+K+
Sbjct: 712 IYAGQWNDFQCEDVNNFICEKD 733


>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
          Length = 214

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 94  CPIYWQQLREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFW 153
           CP  W     KC  FS     WN     C T E+ L +I+ + EL       R +    W
Sbjct: 100 CPEDWLLYGRKCYFFSEEPRDWNTGRQYCHTHEAVLAVIQSQKELEFMFKFTRREP---W 156

Query: 154 IGLNFSLSEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQK 212
           IGL     E  + W+NG   + +   I G  +   C+ +  T + S  C     W+C K
Sbjct: 157 IGLRRVGDE--FHWVNGDPFDPDTFTIAGPGE---CVFVEPTRLVSTECLMTRPWVCSK 210


>gi|153252048 C-type lectin domain family 1, member B isoform b
           [Homo sapiens]
          Length = 196

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 11/156 (7%)

Query: 63  TSLIQKSSIEKCSVDIQQSRNKTTERPGLLN-CPIYWQQLREKCLLFSHTVNPWNNSLAD 121
           T  +Q+ +   C   ++QS  K T +    + C   W+   + C  F      W  S   
Sbjct: 37  TGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGFFRHNLTWEESKQY 96

Query: 122 CSTKESSLLLIRDKDELIHTQ---NLIRDKAILFWIGLNFSLSEKNWKWINGSFLNSNDL 178
           C+   ++LL I +++ + + +   +LIR      W+GL+   S + WKW +GS ++ N  
Sbjct: 97  CTDMNATLLKIDNRNIVEYIKARTHLIR------WVGLSRQKSNEVWKWEDGSVISENMF 150

Query: 179 EIRGDAKEN-SCISISQTSVYSEYCSTEIRWICQKE 213
           E   D K N +C       ++  +C  +   +C+++
Sbjct: 151 EFLEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERK 186


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,759,917
Number of Sequences: 37866
Number of extensions: 358810
Number of successful extensions: 1203
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 141
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press