Search of human proteins with 4504079

Search of human proteins with 4504079

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504079 glycosylphosphatidylinositol anchor attachment
protein 1 [Homo sapiens]
         (621 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504079 glycosylphosphatidylinositol anchor attachment protei...  1229   0.0  
gi|239741718 PREDICTED: hypothetical protein XP_002342296 [Homo ...   248   9e-66
gi|40068047 cyclin M3 isoform 2 [Homo sapiens]                         36   0.12 
gi|40068049 cyclin M3 isoform 1 [Homo sapiens]                         36   0.12 
gi|238814326 solute carrier family 22, member 20 [Homo sapiens]        32   1.7  
gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Hom...    31   3.9  
gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo...    31   3.9  
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             30   5.1  
gi|58219066 solute carrier family 10 (sodium/bile acid cotranspo...    30   5.1  
gi|41327730 calponin 2 isoform b [Homo sapiens]                        30   6.6  
gi|4758018 calponin 2 isoform a [Homo sapiens]                         30   6.6  
gi|147907090 olfactory receptor, family 8, subfamily S, member 1...    30   6.6  
gi|66932902 SREBF chaperone protein [Homo sapiens]                     30   8.6  
gi|22202611 carboxypeptidase D precursor [Homo sapiens]                30   8.6  

>gi|4504079 glycosylphosphatidylinositol anchor attachment protein 1
           [Homo sapiens]
          Length = 621

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 621/621 (100%), Positives = 621/621 (100%)

Query: 1   MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60
           MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV
Sbjct: 1   MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60

Query: 61  EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120
           EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE
Sbjct: 61  EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120

Query: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180
           RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI
Sbjct: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180

Query: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240
           VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE
Sbjct: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240

Query: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300
           GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG
Sbjct: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300

Query: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360
           RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY
Sbjct: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360

Query: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
           LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ
Sbjct: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420

Query: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480
           GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH
Sbjct: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480

Query: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540
           NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP
Sbjct: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540

Query: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600
           RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF
Sbjct: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600

Query: 601 PLLSLGLYPCWLLFWNVLFWK 621
           PLLSLGLYPCWLLFWNVLFWK
Sbjct: 601 PLLSLGLYPCWLLFWNVLFWK 621


>gi|239741718 PREDICTED: hypothetical protein XP_002342296 [Homo
           sapiens]
          Length = 248

 Score =  248 bits (634), Expect = 9e-66
 Identities = 129/165 (78%), Positives = 136/165 (82%), Gaps = 6/165 (3%)

Query: 256 QTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVE 315
           +TFCQK GLLCTLQGKLQP+DWT LD  LQGLQTLLLM+L QAS       GLFL Y VE
Sbjct: 25  ETFCQKVGLLCTLQGKLQPQDWTLLDELLQGLQTLLLMILWQAS------RGLFLHYHVE 78

Query: 316 ALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYM 375
           ALTLR I+SFRQYKYDLVA GKALEGMF KLNHLLE  HQ FFLYLLP LSRFVSIGLYM
Sbjct: 79  ALTLRRISSFRQYKYDLVAAGKALEGMFCKLNHLLEHPHQLFFLYLLPTLSRFVSIGLYM 138

Query: 376 PAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
           PA  FLLLVLG KAL+LWMQLHEAG+GLEE  G P PSVP PP+Q
Sbjct: 139 PATSFLLLVLGFKALQLWMQLHEAGVGLEELRGVPDPSVPAPPAQ 183


>gi|40068047 cyclin M3 isoform 2 [Homo sapiens]
          Length = 659

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 405 EPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV 464
           EPGG        P + G+G A L+A  L + A GL L  L +    V       +EAE  
Sbjct: 122 EPGGGAAEEAAPPWALGLGAAGLLA--LAALARGLQLSALALAPAEVQVLRESGSEAERA 179

Query: 465 VLTLL--AIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGF 522
               L  A   AG AL          QA         L  L+Y A     +     S G 
Sbjct: 180 AARRLEPARRWAGCALGALLLLASLAQA--------ALAVLLYRAAGQRAVPAVLGSAGL 231

Query: 523 L-LATTMVPTAALAK---PHGPRTLYAALL--VLTSPAATLLGSLFLWR----ELQEAPL 572
           + L   +VP A   +      PR L  + L  +LT P A  +G L         L+E  L
Sbjct: 232 VFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVL 291

Query: 573 SLAEGWQLFLAALAQGVLEHHTYGALLFPL 602
            LA G     + L++GVL   T   +L PL
Sbjct: 292 ELARGGGDPYSDLSKGVLRCRTVEDVLTPL 321


>gi|40068049 cyclin M3 isoform 1 [Homo sapiens]
          Length = 707

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 405 EPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV 464
           EPGG        P + G+G A L+A  L + A GL L  L +    V       +EAE  
Sbjct: 122 EPGGGAAEEAAPPWALGLGAAGLLA--LAALARGLQLSALALAPAEVQVLRESGSEAERA 179

Query: 465 VLTLL--AIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGF 522
               L  A   AG AL          QA         L  L+Y A     +     S G 
Sbjct: 180 AARRLEPARRWAGCALGALLLLASLAQA--------ALAVLLYRAAGQRAVPAVLGSAGL 231

Query: 523 L-LATTMVPTAALAK---PHGPRTLYAALL--VLTSPAATLLGSLFLWR----ELQEAPL 572
           + L   +VP A   +      PR L  + L  +LT P A  +G L         L+E  L
Sbjct: 232 VFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVL 291

Query: 573 SLAEGWQLFLAALAQGVLEHHTYGALLFPL 602
            LA G     + L++GVL   T   +L PL
Sbjct: 292 ELARGGGDPYSDLSKGVLRCRTVEDVLTPL 321


>gi|238814326 solute carrier family 22, member 20 [Homo sapiens]
          Length = 555

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 435 QAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRG 494
           Q  GL+LY++  L   + T    VA A  + +   A  A+ L L      V++      G
Sbjct: 363 QKFGLSLYLVQALFGIINTPAMLVATATMIYVGRRATVASFLILAGLM--VIANMFVPEG 420

Query: 495 WMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAALLVLTSPA 554
               +++     AL  GC+A ++F   +L    + PT       G  +++A L  LT+P 
Sbjct: 421 ---TQILCTAQAALGKGCLA-SSFICVYLFTGELYPTEIRQMGMGFASVHARLGGLTAPL 476

Query: 555 ATLLG 559
            T LG
Sbjct: 477 VTTLG 481


>gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Homo
           sapiens]
          Length = 742

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 325 FRQYKYDLVAVGKALEGMFRKLNHLLERLHQS---FFLYLLPGLSRFVSIG 372
           FR++  +  AVG +LEG  R+L   + RL Q    + L++LP  S  +S+G
Sbjct: 22  FRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLHVLPNHSVGISLG 72


>gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo
           sapiens]
          Length = 703

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 325 FRQYKYDLVAVGKALEGMFRKLNHLLERLHQS---FFLYLLPGLSRFVSIG 372
           FR++  +  AVG +LEG  R+L   + RL Q    + L++LP  S  +S+G
Sbjct: 22  FRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLHVLPNHSVGISLG 72


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%)

Query: 400 GMGLEEPGGAPGPSVPLPPSQGVGLASLVAPLL--ISQAMGL-ALYVLPVLG 448
           G+GL  P   P PS+ LPPS G    +L +P L  +S+A  L   Y LPV G
Sbjct: 936 GLGLYPPAYGPIPSLSLPPSPGP--QALGSPQLPWVSEAGPLDGTYYLPVSG 985


>gi|58219066 solute carrier family 10 (sodium/bile acid
           cotransporter family), member 5 [Homo sapiens]
          Length = 438

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 352 RLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLL-VLGLKALELWMQLHEAGMGLEEPGGAP 410
           +L Q+ +   LP +   V+    MP  GFLL  ++ L   + +  +    M    PGG  
Sbjct: 165 QLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV----MTCTCPGGGG 220

Query: 411 GPSVPLPPSQGVGLASLV---APLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLT 467
           G    L       LA L+   + LL    M +  Y+   +     T H PV++  + +L 
Sbjct: 221 GYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLF 280

Query: 468 LLAIYAAGLALPHNTHRVVS-TQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLAT 526
           +L   + G+ + H      S  +   R    + +   IYL   +G + L   +L  +L  
Sbjct: 281 ILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLG 340

Query: 527 TMVPTAAL 534
            +VP   L
Sbjct: 341 LLVPALGL 348


>gi|41327730 calponin 2 isoform b [Homo sapiens]
          Length = 270

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 205 TGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGL 264
           T     P  G +  ++  +  +        L   +EGL G     D    FQ   + G +
Sbjct: 4   TQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPD----FQKGLKDGTI 59

Query: 265 LCTLQGKLQPEDWTSLDGPLQGLQTL 290
           LCTL  KLQP     ++  +Q    L
Sbjct: 60  LCTLMNKLQPGSVPKINRSMQNWHQL 85


>gi|4758018 calponin 2 isoform a [Homo sapiens]
          Length = 309

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 205 TGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGL 264
           T     P  G +  ++  +  +        L   +EGL G     D    FQ   + G +
Sbjct: 4   TQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPD----FQKGLKDGTI 59

Query: 265 LCTLQGKLQPEDWTSLDGPLQGLQTL 290
           LCTL  KLQP     ++  +Q    L
Sbjct: 60  LCTLMNKLQPGSVPKINRSMQNWHQL 85


>gi|147907090 olfactory receptor, family 8, subfamily S, member 1
           [Homo sapiens]
          Length = 359

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 425 ASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLA---IYAAGLALPHN 481
           A++  PLL  Q MG  LY+      H+    + +   +A++  LLA   ++     + H 
Sbjct: 124 AAICRPLLYGQIMGKQLYM------HLVWGSWGLGFLDALINVLLAVNMVFCEAKIIHHY 177

Query: 482 THRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPT 531
           ++ + S        ++  L+AL+   L  G   L NF L FL  T ++ T
Sbjct: 178 SYEMPSLLPLSCSDISRSLIALLCSTLLHG---LGNFLLVFLSYTRIIST 224


>gi|66932902 SREBF chaperone protein [Homo sapiens]
          Length = 1279

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 5/39 (12%)

Query: 386 GLKALELWMQLHEAG-MGLEEPGGAP----GPSVPLPPS 419
           GL+A E W +L + G  G EEPG +P     P  P PPS
Sbjct: 827 GLEAQESWERLSDGGKAGPEEPGDSPPLRHRPRGPPPPS 865


>gi|22202611 carboxypeptidase D precursor [Homo sapiens]
          Length = 1380

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 14/90 (15%)

Query: 334 AVGKALEGMFRKLNHL--LERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALE 391
           A  +A EG F +  H   LE   +      LPGL+R  SIG              ++   
Sbjct: 46  AGAEAAEGQFDRYYHEEELESALREAAAAGLPGLARLFSIGR------------SVEGRP 93

Query: 392 LWMQLHEAGMGLEEPGGAPGPSVPLPPSQG 421
           LW+    AG+G   P G  GP    P + G
Sbjct: 94  LWVLRLTAGLGSLIPEGDAGPDAAGPDAAG 123


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,984,241
Number of Sequences: 37866
Number of extensions: 1023283
Number of successful extensions: 4214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4202
Number of HSP's gapped (non-prelim): 19
length of query: 621
length of database: 18,247,518
effective HSP length: 108
effective length of query: 513
effective length of database: 14,157,990
effective search space: 7263048870
effective search space used: 7263048870
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.