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Search of human proteins with 4503897
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503897 galactokinase 2 isoform 1 [Homo sapiens]
(458 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503897 galactokinase 2 isoform 1 [Homo sapiens] 917 0.0
gi|48527957 galactokinase 2 isoform 2 [Homo sapiens] 885 0.0
gi|4503895 galactokinase 1 [Homo sapiens] 159 4e-39
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 37 0.037
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 37 0.037
gi|167001643 mevalonate kinase [Homo sapiens] 37 0.049
gi|4557769 mevalonate kinase [Homo sapiens] 37 0.049
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 37 0.049
gi|92091575 coiled-coil domain containing 57 [Homo sapiens] 33 0.54
gi|82880658 heat shock 70kDa protein 14 isoform 1 [Homo sapiens] 30 3.5
gi|199562283 retrotransposon-like 1 [Homo sapiens] 30 4.6
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 30 4.6
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 30 4.6
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 30 4.6
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 30 6.0
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 30 6.0
gi|34996489 pleckstrin homology domain interacting protein [Homo... 30 6.0
gi|166851840 E74-like factor 3 (ets domain transcription factor,... 30 6.0
gi|167235023 E74-like factor 3 (ets domain transcription factor,... 30 6.0
gi|239750380 PREDICTED: similar to hCG1640792 [Homo sapiens] 29 7.8
gi|239744682 PREDICTED: hypothetical protein XP_002343241 [Homo ... 29 7.8
gi|153792305 leucine rich repeat containing 58 [Homo sapiens] 29 7.8
>gi|4503897 galactokinase 2 isoform 1 [Homo sapiens]
Length = 458
Score = 917 bits (2371), Expect = 0.0
Identities = 458/458 (100%), Positives = 458/458 (100%)
Query: 1 MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLP 60
MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLP
Sbjct: 1 MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLP 60
Query: 61 MAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQE 120
MAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQE
Sbjct: 61 MAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQE 120
Query: 121 HFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER 180
HFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER
Sbjct: 121 HFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER 180
Query: 181 YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHF 240
YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHF
Sbjct: 181 YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHF 240
Query: 241 NIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEI 300
NIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEI
Sbjct: 241 NIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEI 300
Query: 301 CRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLL 360
CRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLL
Sbjct: 301 CRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLL 360
Query: 361 GELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSF 420
GELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSF
Sbjct: 361 GELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSF 420
Query: 421 LANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVLLEA 458
LANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVLLEA
Sbjct: 421 LANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVLLEA 458
>gi|48527957 galactokinase 2 isoform 2 [Homo sapiens]
Length = 447
Score = 885 bits (2286), Expect = 0.0
Identities = 441/443 (99%), Positives = 442/443 (99%)
Query: 16 HPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVK 75
+ RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVK
Sbjct: 5 YDRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVK 64
Query: 76 TYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVD 135
TYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVD
Sbjct: 65 TYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVD 124
Query: 136 GNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISF 195
GNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISF
Sbjct: 125 GNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISF 184
Query: 196 LAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLA 255
LAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLA
Sbjct: 185 LAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLA 244
Query: 256 KYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQI 315
KYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQI
Sbjct: 245 KYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQI 304
Query: 316 LSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMY 375
LSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMY
Sbjct: 305 LSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMY 364
Query: 376 ECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGS 435
ECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGS
Sbjct: 365 ECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGS 424
Query: 436 LAPEKQSLFATKPGGGALVLLEA 458
LAPEKQSLFATKPGGGALVLLEA
Sbjct: 425 LAPEKQSLFATKPGGGALVLLEA 447
>gi|4503895 galactokinase 1 [Homo sapiens]
Length = 392
Score = 159 bits (403), Expect = 4e-39
Identities = 127/429 (29%), Positives = 194/429 (45%), Gaps = 66/429 (15%)
Query: 7 ATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQD 66
A R+ QVAE L + + F +FG+ P+ V APGRVN+IGEH DY VLPMA+E
Sbjct: 3 ALRQPQVAE--LLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELM 60
Query: 67 VLIAVEPVKTYALQLANTN-----PLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEH 121
++ P K + L T+ P F ++ P W NY +KG+ ++
Sbjct: 61 TVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANY----VKGVIQY 116
Query: 122 FGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER- 180
+ + L G + +V ++P GLSSS++L + + + A++C ++E
Sbjct: 117 YPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHS 176
Query: 181 YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHF 240
+ G G MDQ IS + ++G A LI+ L + V L + V+ + + A+S +
Sbjct: 177 FAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEY 236
Query: 241 NIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEI 300
+R +C A+ L K L EVQ
Sbjct: 237 PVRRRQCEEVARALGKES---------LREVQ---------------------------- 259
Query: 301 CRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLL 360
LEEL +D++ + ++RA+HV E R Q +
Sbjct: 260 -------LEELEA------ARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGD---YRAF 303
Query: 361 GELMNQSHMSCRDMYECSCPELDQLVDICRKF-GAQGSRLTGAGWGGCTVSMVPADKLPS 419
G LM +SH S RD YE SCPELDQLV+ G GSR+TG G+GGCTV+++ A P
Sbjct: 304 GRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASAAPH 363
Query: 420 FLANVHKAY 428
+ ++ + Y
Sbjct: 364 AMRHIQEHY 372
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 37.0 bits (84), Expect = 0.037
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 218 PSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGI 277
P G F+IA+S ++ A H+ L A LL +K L + EE+ + +
Sbjct: 222 PDGCSFIIADSF--LHHAYRFHYT-------LCATLLLAFKGLHSYFITVTEEIPSCQKL 272
Query: 278 SLEEMLL------VTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQR 331
LEEM + + E+ E NP+E+ + ++L +L + +++ Q + + L++
Sbjct: 273 ELEEMDVEARLTELCEEVKKIE--NPDELAELINMNLAQLCSLLMALWGQFLEVITLHEE 330
Query: 332 AKHVYSEAARVLQFKK-----ICEEAPENMVQLLGELMNQSHM 369
+ + ++ L+ ++ C E P EL QSH+
Sbjct: 331 LRILLAQEHHTLRVRRFSEAFFCFEHPREAAIAYQELHAQSHL 373
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 37.0 bits (84), Expect = 0.037
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 218 PSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGI 277
P G F+IA+S ++ A H+ L A LL +K L + EE+ + +
Sbjct: 222 PDGCSFIIADSF--LHHAYRFHYT-------LCATLLLAFKGLHSYFITVTEEIPSCQKL 272
Query: 278 SLEEMLL------VTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQR 331
LEEM + + E+ E NP+E+ + ++L +L + +++ Q + + L++
Sbjct: 273 ELEEMDVEARLTELCEEVKKIE--NPDELAELINMNLAQLCSLLMALWGQFLEVITLHEE 330
Query: 332 AKHVYSEAARVLQFKK-----ICEEAPENMVQLLGELMNQSHM 369
+ + ++ L+ ++ C E P EL QSH+
Sbjct: 331 LRILLAQEHHTLRVRRFSEAFFCFEHPREAAIAYQELHAQSHL 373
>gi|167001643 mevalonate kinase [Homo sapiens]
Length = 396
Score = 36.6 bits (83), Expect = 0.049
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 352 APENMVQLLGEL--MNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTV 409
APE + +L EL MNQ H++ + S LDQL + R G S+LTGAG GGC +
Sbjct: 287 APEQYL-VLEELIDMNQHHLNALGVGHAS---LDQLCQVTRARGLH-SKLTGAGGGGCGI 341
Query: 410 SMV 412
+++
Sbjct: 342 TLL 344
>gi|4557769 mevalonate kinase [Homo sapiens]
Length = 396
Score = 36.6 bits (83), Expect = 0.049
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 352 APENMVQLLGEL--MNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTV 409
APE + +L EL MNQ H++ + S LDQL + R G S+LTGAG GGC +
Sbjct: 287 APEQYL-VLEELIDMNQHHLNALGVGHAS---LDQLCQVTRARGLH-SKLTGAGGGGCGI 341
Query: 410 SMV 412
+++
Sbjct: 342 TLL 344
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 36.6 bits (83), Expect = 0.049
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 207 FSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVL 266
FSPL T G A N AAT+H+ +R++ L + L AK K L + VL
Sbjct: 946 FSPLEETKYLFQVGMWVWEAGLSPNANPAATTHYMLRLVGVGLTSSLSAKEKELAFGNVL 1005
Query: 267 RLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQ-ILSPNTQDVLI 325
+ Q++ + L + L+ E +PE + ++L+ RT+ + P +QD +
Sbjct: 1006 -VNSKQSRFLVLLNDGNCTLYYRLYLEQGSPEAVDN-HPLALQLDRTEGSMPPRSQDTIC 1063
Query: 326 FKLYQRAKHVYS 337
+ + YS
Sbjct: 1064 LTACPKQRSQYS 1075
>gi|92091575 coiled-coil domain containing 57 [Homo sapiens]
Length = 915
Score = 33.1 bits (74), Expect = 0.54
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 256 KYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQI 315
+Y++L+W +LEE+ +L + +E+LL E + + + + +
Sbjct: 148 QYENLKWTLERKLEELDGELALQRQELLLEFESKMRKREHE-------FRLQADNMSNTA 200
Query: 316 LSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQ-LLGELMNQSHMS 370
LS + L+ K + K ++AA LQ + E +Q GEL + MS
Sbjct: 201 LSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMS 256
>gi|82880658 heat shock 70kDa protein 14 isoform 1 [Homo sapiens]
Length = 509
Score = 30.4 bits (67), Expect = 3.5
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 296 NPEEICRCLGISLEELRTQILSPNTQDVLI---FKLYQRAKHVYSEAARVLQF 345
NPE++ R + ++E +L + DV+I F ++ K+ EAAR F
Sbjct: 112 NPEDVARLIFSKMKETAHSVLGSDANDVVITVPFDFGEKQKNALGEAARAAGF 164
>gi|199562283 retrotransposon-like 1 [Homo sapiens]
Length = 1358
Score = 30.0 bits (66), Expect = 4.6
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 267 RLEEV-QAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLI 325
R E+V +A G+ LEEM AL P+P P+ + + L+++ + Q+VLI
Sbjct: 681 RTEDVWKAAFGLELEEMKSYQPFALSPDPIIPQNVIHFI---LKDMLGFFVLSYGQEVLI 737
Query: 326 FKLYQRAKHVYSEAARVLQFK 346
+ + Q +H++ +++F+
Sbjct: 738 YSMSQE-EHLHHVRQVLVRFR 757
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 30.0 bits (66), Expect = 4.6
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 286 TEDALHPEPYNPEEICRCLGISLEELRTQILSP------------NTQDVLIFKLYQRAK 333
T+ A P+ +++CR LG+ + + +L+P T++ F L AK
Sbjct: 394 TDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAK 453
Query: 334 HVYSEAAR--VLQFKKICEEAPENMVQLLGEL 363
Y R VL+ + + +P LG L
Sbjct: 454 ATYERLFRWLVLRLNRALDRSPRQGASFLGIL 485
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 30.0 bits (66), Expect = 4.6
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 286 TEDALHPEPYNPEEICRCLGISLEELRTQILSP------------NTQDVLIFKLYQRAK 333
T+ A P+ +++CR LG+ + + +L+P T++ F L AK
Sbjct: 386 TDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAK 445
Query: 334 HVYSEAAR--VLQFKKICEEAPENMVQLLGEL 363
Y R VL+ + + +P LG L
Sbjct: 446 ATYERLFRWLVLRLNRALDRSPRQGASFLGIL 477
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 30.0 bits (66), Expect = 4.6
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 286 TEDALHPEPYNPEEICRCLGISLEELRTQILSP------------NTQDVLIFKLYQRAK 333
T+ A P+ +++CR LG+ + + +L+P T++ F L AK
Sbjct: 394 TDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAK 453
Query: 334 HVYSEAAR--VLQFKKICEEAPENMVQLLGEL 363
Y R VL+ + + +P LG L
Sbjct: 454 ATYERLFRWLVLRLNRALDRSPRQGASFLGIL 485
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 29.6 bits (65), Expect = 6.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 142 SGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER 180
+G +A V G+VT T G+ + K E+C K+ R
Sbjct: 251 AGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFR 289
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 29.6 bits (65), Expect = 6.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 142 SGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER 180
+G +A V G+VT T G+ + K E+C K+ R
Sbjct: 251 AGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFR 289
>gi|34996489 pleckstrin homology domain interacting protein [Homo
sapiens]
Length = 1821
Score = 29.6 bits (65), Expect = 6.0
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 153 CAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISF-LAEEGTAKLIEFSPLR 211
CA L L +++ ++ + +C+ S+RY+ + G D +I F L + GT K+ +P
Sbjct: 257 CAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGA--DGTICFWLWDAGTLKI---NPRP 311
Query: 212 ATDVKLPSGAVFVIANS 228
A + P V +I +S
Sbjct: 312 AKFTERPRPGVQMICSS 328
>gi|166851840 E74-like factor 3 (ets domain transcription factor,
epithelial-specific ) [Homo sapiens]
Length = 371
Score = 29.6 bits (65), Expect = 6.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 323 VLIFKLYQRAKHVYSEAARVLQFKK-------ICEEAPENMVQLLGELMNQSHMSCRDMY 375
VL + YQ K+ Y +A + F + +C A E + + G L +Q H RD+
Sbjct: 72 VLDWISYQVEKNKYDASA--IDFSRCDMDGATLCNCALEELRLVFGPLGDQLHAQLRDLT 129
Query: 376 ECSCPELDQLVDICRKFG 393
S EL ++++ K G
Sbjct: 130 SSSSDELSWIIELLEKDG 147
>gi|167235023 E74-like factor 3 (ets domain transcription factor,
epithelial-specific ) [Homo sapiens]
Length = 371
Score = 29.6 bits (65), Expect = 6.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 323 VLIFKLYQRAKHVYSEAARVLQFKK-------ICEEAPENMVQLLGELMNQSHMSCRDMY 375
VL + YQ K+ Y +A + F + +C A E + + G L +Q H RD+
Sbjct: 72 VLDWISYQVEKNKYDASA--IDFSRCDMDGATLCNCALEELRLVFGPLGDQLHAQLRDLT 129
Query: 376 ECSCPELDQLVDICRKFG 393
S EL ++++ K G
Sbjct: 130 SSSSDELSWIIELLEKDG 147
>gi|239750380 PREDICTED: similar to hCG1640792 [Homo sapiens]
Length = 215
Score = 29.3 bits (64), Expect = 7.8
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 81 LANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHF 122
LA+ PD S + I I K +W N LCGLK Q F
Sbjct: 84 LAHPAQFSPDDKYSRHRITIKKRLKVWTNNTLCGLKTNQIKF 125
>gi|239744682 PREDICTED: hypothetical protein XP_002343241 [Homo
sapiens]
Length = 215
Score = 29.3 bits (64), Expect = 7.8
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 81 LANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHF 122
LA+ PD S + I I K +W N LCGLK Q F
Sbjct: 84 LAHPAQFSPDDKYSRHRITIKKRLKVWTNNTLCGLKTNQIKF 125
>gi|153792305 leucine rich repeat containing 58 [Homo sapiens]
Length = 371
Score = 29.3 bits (64), Expect = 7.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 339 AARVLQFKKICE---EAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKF 392
AAR ++ + I + P N+++ LG N + C +Y C + VD C K+
Sbjct: 266 AARTIKIRNISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKY 322
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,324,867
Number of Sequences: 37866
Number of extensions: 756937
Number of successful extensions: 1625
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 30
length of query: 458
length of database: 18,247,518
effective HSP length: 106
effective length of query: 352
effective length of database: 14,233,722
effective search space: 5010270144
effective search space used: 5010270144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.