Guide to the Human Genome
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Name: GALK1 Sequence: fasta or formatted (392aa) NCBI GI: 4503895
Description:

galactokinase 1

Referenced in:

Galactose and Lactose

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         48           4
 C cysteine            2.0          8           1
 D aspartate           3.3         13           2
 E glutamate           7.7         30           2
 F phenylalanine       2.8         11           1
 G glycine             8.4         33           3
 H histidine           2.3          9           1
 I isoleucine          2.3          9           1
 K lysine              1.8          7           1
 L leucine            12.0         47           2
 M methionine          2.3          9           1
 N asparagine          1.3          5           1
 P proline             5.6         22           1
 Q glutamine           5.1         20           2
 R arginine            7.9         31           3
 S serine              7.7         30           3
 T threonine           4.3         17           2
 V valine              7.9         31           3
 W tryptophan          0.3          1           1
 Y tyrosine            2.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galactokinase 1 
GALK2                 0.180   galactokinase 2 isoform 1 
GALK2                 0.177   galactokinase 2 isoform 2 
MVK                   0.031   mevalonate kinase 
MVK                   0.031   mevalonate kinase 
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
RECK                  0.009   RECK protein precursor 
PLVAP                 0.008   plasmalemma vesicle associated protein 
LOC100134008          0.007   PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ...
GABPB1                0.007   GA binding protein transcription factor, beta subunit...
GABPB1                0.007   GA binding protein transcription factor, beta subunit...
KIAA0562              0.007   glycine-, glutamate-, thienylcyclohexylpiperidine-bin...
MYO6                  0.007   myosin VI 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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