Guide to the Human Genome
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Name: DPM1 Sequence: fasta or formatted (260aa) NCBI GI: 4503363
Description:

dolichyl-phosphate mannosyltransferase 1

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          9           1
 C cysteine            0.4          1           1
 D aspartate           4.2         11           2
 E glutamate           7.3         19           1
 F phenylalanine       3.8         10           1
 G glycine             8.8         23           2
 H histidine           1.5          4           2
 I isoleucine          8.8         23           4
 K lysine              6.9         18           2
 L leucine            10.8         28           2
 M methionine          1.9          5           1
 N asparagine          3.8         10           1
 P proline             3.8         10           1
 Q glutamine           2.3          6           1
 R arginine            8.5         22           2
 S serine              7.7         20           1
 T threonine           4.2         11           2
 V valine              6.2         16           1
 W tryptophan          0.8          2           1
 Y tyrosine            4.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dolichyl-phosphate mannosyltransferase 1 
ALG5                  0.098   dolichyl-phosphate beta-glucosyltransferase isoform 1...
ALG5                  0.041   dolichyl-phosphate beta-glucosyltransferase isoform...
GALNTL2               0.020   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.018   N-acetylgalactosaminyltransferase 11 
GALNTL1               0.014   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT8                0.012   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
HECW1                 0.012   NEDD4-like ubiquitin-protein ligase 1 
GALNT4                0.012   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
C19orf51              0.010   hypothetical protein LOC352909 
CHD4                  0.006   chromodomain helicase DNA binding protein 4 
GALNT14               0.006   N-acetylgalactosaminyltransferase 14 
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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