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Search of human proteins with 4502281
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502281 Na+/K+ -ATPase beta 3 subunit [Homo sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502281 Na+/K+ -ATPase beta 3 subunit [Homo sapiens] 576 e-165
gi|49574491 Na+/K+ -ATPase beta 2 subunit [Homo sapiens] 247 7e-66
gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide i... 187 9e-48
gi|4557339 hydrogen/potassium-exchanging ATPase 4B [Homo sapiens] 178 4e-45
gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide iso... 177 7e-45
gi|4502277 Na+/K+ -ATPase beta 1 subunit isoform a [Homo sapiens] 174 1e-43
gi|49574489 Na+/K+ -ATPase beta 1 subunit isoform b [Homo sapiens] 173 2e-43
gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo s... 32 0.47
gi|31317263 tafazzin isoform 4 [Homo sapiens] 29 4.0
gi|31317261 tafazzin isoform 3 [Homo sapiens] 29 4.0
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 29 5.2
gi|109715825 zinc finger protein 690 [Homo sapiens] 29 5.2
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens] 28 6.8
gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... 28 6.8
gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... 28 6.8
gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... 28 6.8
gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens] 28 8.9
>gi|4502281 Na+/K+ -ATPase beta 3 subunit [Homo sapiens]
Length = 279
Score = 576 bits (1485), Expect = e-165
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MTKNEKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWV 60
MTKNEKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWV
Sbjct: 1 MTKNEKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWV 60
Query: 61 MLQTLNDEVPKYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPYTLE 120
MLQTLNDEVPKYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPYTLE
Sbjct: 61 MLQTLNDEVPKYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPYTLE 120
Query: 121 EQKNLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIG 180
EQKNLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIG
Sbjct: 121 EQKNLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIG 180
Query: 181 LKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPN 240
LKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPN
Sbjct: 181 LKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPN 240
Query: 241 NTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKITARA 279
NTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKITARA
Sbjct: 241 NTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKITARA 279
>gi|49574491 Na+/K+ -ATPase beta 2 subunit [Homo sapiens]
Length = 290
Score = 247 bits (631), Expect = 7e-66
Identities = 136/288 (47%), Positives = 184/288 (63%), Gaps = 21/288 (7%)
Query: 3 KNEKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVML 62
+ EKKS Q + EWK F++NP T +F+GRT SW ILLFYLVFYGFL A+F+ TMWVML
Sbjct: 4 QKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMWVML 63
Query: 63 QTLNDEVPKYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPY--TLE 120
QT++D PKY+D++ +PGLM+ PK L+ + SD S+ +++ L KFL+PY +++
Sbjct: 64 QTVSDHTPKYQDRLATPGLMIRPK-TENLDVIVNVSDTESWDQHVQKLNKFLEPYNDSIQ 122
Query: 121 EQKNLTVCPDGALFEQKGPVYV-----ACQFPISLLQACSGMND-PDFGYSQGNPCILVK 174
QKN VC G +EQ + ACQF + L CSG+ D +GYS G PC+ +K
Sbjct: 123 AQKN-DVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYSTGQPCVFIK 181
Query: 175 MNRIIGL--KPEGVPRIDCVSKN----EDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQ 228
MNR+I + C K E++ N ++P NG IDL YFPYYGKK HV Y Q
Sbjct: 182 MNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQ 241
Query: 229 PLVAVQ-VSFAPNNTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKI 275
PLVAV+ ++ PN EV VEC+I+ +AN+ + D+RDKF GRV FK+
Sbjct: 242 PLVAVKFLNVTPN---VEVNVECRIN-AANIATDDERDKFAGRVAFKL 285
>gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform A [Homo sapiens]
Length = 357
Score = 187 bits (475), Expect = 9e-48
Identities = 105/275 (38%), Positives = 160/275 (58%), Gaps = 15/275 (5%)
Query: 11 QSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQTLNDEVP 70
Q L ++++P FL RT +SW LILL Y FY LAA+ + M+ + T++ +P
Sbjct: 84 QKLQIMSEYLWDPERRMFLARTGQSWSLILLIYFFFYASLAAVITLCMYTLFLTISPYIP 143
Query: 71 KYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPY--TLEEQKNLTVC 128
+ +++ PG+M+ P +L + F+ S+P ++ Y+ L FL+ Y +L+E+ N+ C
Sbjct: 144 TFTERVKPPGVMIRPF-AHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVD-C 201
Query: 129 PDGALFEQKGPV---YVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKPE- 184
P G F Q G ACQF S L+ CSG+ DP FGYS G PCIL+KMNRI+G +PE
Sbjct: 202 PPGQYFIQDGNEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPEL 261
Query: 185 GVP-RIDCV---SKNEDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPN 240
G P ++ C DI +++ YP + DL+Y+PYYGK HV Y PLVA+ +
Sbjct: 262 GDPVKVSCKVQRGDENDIRSISYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVK 321
Query: 241 NTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKI 275
N + V V+C++ G + + D+F+GRV+F +
Sbjct: 322 N--QAVPVQCQLKGKGVINDVIN-DRFVGRVIFTL 353
>gi|4557339 hydrogen/potassium-exchanging ATPase 4B [Homo sapiens]
Length = 291
Score = 178 bits (452), Expect = 4e-45
Identities = 100/285 (35%), Positives = 155/285 (54%), Gaps = 17/285 (5%)
Query: 5 EKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQT 64
EKK+ Q + E++ + +NP TG+ LGRT W I L+Y+ FY + LF+ ++V++QT
Sbjct: 6 EKKTCGQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGLFALCLYVLMQT 65
Query: 65 LNDEVPKYRDQIPSPGLMVFPKPV--TALEYTFSRSDPTSYAGYIEDLKKFLKPYTLEEQ 122
++ P Y+DQ+ SPG+ + P LE ++ SD ++A + L FL Y+ Q
Sbjct: 66 VDPYTPDYQDQLRSPGVTLRPDVYGEKGLEIVYNVSDNRTWADLTQTLHAFLAGYSPAAQ 125
Query: 123 KNLTVCPDGALFEQ---KGPVYV--ACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNR 177
++ C F Q + P + +C+F +LQ CSG+ DP+FG+ +G PC ++KMNR
Sbjct: 126 EDSINCTSEQYFFQESFRAPNHTKFSCKFTADMLQNCSGLADPNFGFEEGKPCFIIKMNR 185
Query: 178 IIGLKPE--GVPRIDCVSKNEDIP-----NVAVYPHNGMIDLKYFPYYGKKLHVGYLQPL 230
I+ P PR+DC ++ V YP NG L YFPYYGKK Y PL
Sbjct: 186 IVKFLPSNGSAPRVDCAFLDQPRELGQPLQVKYYPPNGTFSLHYFPYYGKKAQPHYSNPL 245
Query: 231 VAVQVSFAPNNTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKI 275
VA ++ P N EV + CK+ + ++ + D + G+V FK+
Sbjct: 246 VAAKLLNIPRNA--EVAIVCKV-MAEHVTFNNPHDPYEGKVEFKL 287
>gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform B [Homo sapiens]
Length = 353
Score = 177 bits (450), Expect = 7e-45
Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 19/275 (6%)
Query: 11 QSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQTLNDEVP 70
Q L ++++P FL RT GLILL Y FY LAA+ + M+ + T++ +P
Sbjct: 84 QKLQIMSEYLWDPERRMFLART----GLILLIYFFFYASLAAVITLCMYTLFLTISPYIP 139
Query: 71 KYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPY--TLEEQKNLTVC 128
+ +++ PG+M+ P +L + F+ S+P ++ Y+ L FL+ Y +L+E+ N+ C
Sbjct: 140 TFTERVKPPGVMIRPF-AHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVD-C 197
Query: 129 PDGALFEQKGPV---YVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKPE- 184
P G F Q G ACQF S L+ CSG+ DP FGYS G PCIL+KMNRI+G +PE
Sbjct: 198 PPGQYFIQDGNEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPEL 257
Query: 185 GVP-RIDCV---SKNEDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPN 240
G P ++ C DI +++ YP + DL+Y+PYYGK HV Y PLVA+ +
Sbjct: 258 GDPVKVSCKVQRGDENDIRSISYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVK 317
Query: 241 NTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKI 275
N + V V+C++ G + + D+F+GRV+F +
Sbjct: 318 N--QAVPVQCQLKGKGVINDVIN-DRFVGRVIFTL 349
>gi|4502277 Na+/K+ -ATPase beta 1 subunit isoform a [Homo sapiens]
Length = 303
Score = 174 bits (440), Expect = 1e-43
Identities = 107/298 (35%), Positives = 160/298 (53%), Gaps = 40/298 (13%)
Query: 16 WKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQTLNDEVPKYRDQ 75
WK FI+N EFLGRT SW ILLFY++FYG LA +F T+ VML T+++ P Y+D+
Sbjct: 12 WKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDR 71
Query: 76 IPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPYTLEEQKNLTVCPD----- 130
+ PGL P+ + E +F +DP SY Y+ ++ +FL+ Y Q++ + D
Sbjct: 72 VAPPGLTQIPQ-IQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFEDCGDVP 130
Query: 131 ------GALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKPE 184
G ++G V C+F + L CSG+ND +GY +G PCI++K+NR++G KP+
Sbjct: 131 SEPKERGDFNHERGERKV-CRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVLGFKPK 189
Query: 185 -----------------GVPRIDCVSK-NEDIPNVAVYPHNGM-----IDLKYFPYYGKK 221
V + C K +ED V + G+ L+Y+PYYGK
Sbjct: 190 PPKNESLETYPVMKYNPNVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKL 249
Query: 222 LHVGYLQPLVAVQVSFAPNNTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKITARA 279
L YLQPL+AVQ + +T E+ +ECK G N+ ++D+F GR KI ++
Sbjct: 250 LQPKYLQPLLAVQFTNLTMDT--EIRIECKAYGE-NI-GYSEKDRFQGRFDVKIEVKS 303
>gi|49574489 Na+/K+ -ATPase beta 1 subunit isoform b [Homo sapiens]
Length = 301
Score = 173 bits (438), Expect = 2e-43
Identities = 107/294 (36%), Positives = 158/294 (53%), Gaps = 40/294 (13%)
Query: 16 WKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQTLNDEVPKYRDQ 75
WK FI+N EFLGRT SW ILLFY++FYG LA +F T+ VML T+++ P Y+D+
Sbjct: 12 WKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDR 71
Query: 76 IPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPYTLEEQKNLTVCPD----- 130
+ PGL P+ + E +F +DP SY Y+ ++ +FL+ Y Q++ + D
Sbjct: 72 VAPPGLTQIPQ-IQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFEDCGDVP 130
Query: 131 ------GALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKPE 184
G ++G V C+F + L CSG+ND +GY +G PCI++K+NR++G KP+
Sbjct: 131 SEPKERGDFNHERGERKV-CRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVLGFKPK 189
Query: 185 -----------------GVPRIDCVSK-NEDIPNVAVYPHNGM-----IDLKYFPYYGKK 221
V + C K +ED V + G+ L+Y+PYYGK
Sbjct: 190 PPKNESLETYPVMKYNPNVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKL 249
Query: 222 LHVGYLQPLVAVQVSFAPNNTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKI 275
L YLQPL+AVQ + +T E+ +ECK G N+ ++D+F GR KI
Sbjct: 250 LQPKYLQPLLAVQFTNLTMDT--EIRIECKAYGE-NI-GYSEKDRFQGRFDVKI 299
>gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo
sapiens]
Length = 614
Score = 32.3 bits (72), Expect = 0.47
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 124 NLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKP 183
++ VC D A G Y+ Q P +A MN F +G P ++ R GL+
Sbjct: 39 SIRVCRDVATRRSLGYAYINFQQPADAERALDTMN---FEMLKGQPIRIMWSQRDPGLRK 95
Query: 184 EGVPRIDCVSKNEDIPNVAVY 204
GV I + + I N A+Y
Sbjct: 96 SGVGNIFIKNLEDSIDNKALY 116
>gi|31317263 tafazzin isoform 4 [Homo sapiens]
Length = 248
Score = 29.3 bits (64), Expect = 4.0
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 164 YSQGNPCILVKMNR--IIGLKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDL-----KYFP 216
Y +G IL K+N + + PEG+ R+ +++ P + H GM D+ YFP
Sbjct: 128 YQKGMDFILEKLNHGDWVHIFPEGIGRL--IAECHLNPIILPLWHVGMNDVLPNSPPYFP 185
Query: 217 YYGKKLHVGYLQPLVAVQV 235
+G+K+ V +P A+ V
Sbjct: 186 RFGQKITVLIGKPFSALPV 204
>gi|31317261 tafazzin isoform 3 [Homo sapiens]
Length = 278
Score = 29.3 bits (64), Expect = 4.0
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 164 YSQGNPCILVKMNR--IIGLKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDL-----KYFP 216
Y +G IL K+N + + PEG+ R+ +++ P + H GM D+ YFP
Sbjct: 158 YQKGMDFILEKLNHGDWVHIFPEGIGRL--IAECHLNPIILPLWHVGMNDVLPNSPPYFP 215
Query: 217 YYGKKLHVGYLQPLVAVQV 235
+G+K+ V +P A+ V
Sbjct: 216 RFGQKITVLIGKPFSALPV 234
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 28.9 bits (63), Expect = 5.2
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 124 NLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKP 183
++ VC D G YV Q P +A MN F +G P ++ R L+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN---FDVIKGKPVRIMWSQRDPSLRK 95
Query: 184 EGVPRIDCVSKNEDIPNVAVY 204
GV I + ++ I N A+Y
Sbjct: 96 SGVGNIFIKNLDKSIDNKALY 116
>gi|109715825 zinc finger protein 690 [Homo sapiens]
Length = 852
Score = 28.9 bits (63), Expect = 5.2
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 227 LQPLVAVQVSFAPNNTGKEVTVECKIDGSANLKSQDDRDK 266
+ LV+V+V+ AP N G+E T C + G++ ++Q ++
Sbjct: 490 MDALVSVRVA-APPNDGQEETASCPVQGTSEAEAQKQAEE 528
>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
Length = 1222
Score = 28.5 bits (62), Expect = 6.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 189 IDCVSKNEDIP--NVAVYPHNGMIDLKYFPY 217
+D + + ED P +V+ + HN ID KY PY
Sbjct: 594 VDHIERQEDSPINSVSAFFHNLDIDFKYIPY 624
>gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Homo
sapiens]
Length = 631
Score = 28.5 bits (62), Expect = 6.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 124 NLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKP 183
++ VC D G YV Q P +A MN F +G P ++ R L+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN---FDVIKGKPIRIMWSQRDPSLRK 95
Query: 184 EGVPRIDCVSKNEDIPNVAVY 204
GV + + ++ I N A+Y
Sbjct: 96 SGVGNVFIKNLDKSIDNKALY 116
>gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo
sapiens]
Length = 644
Score = 28.5 bits (62), Expect = 6.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 124 NLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKP 183
++ VC D G YV Q P +A MN F +G P ++ R L+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN---FDVIKGKPIRIMWSQRDPSLRK 95
Query: 184 EGVPRIDCVSKNEDIPNVAVY 204
GV + + ++ I N A+Y
Sbjct: 96 SGVGNVFIKNLDKSIDNKALY 116
>gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Homo
sapiens]
Length = 660
Score = 28.5 bits (62), Expect = 6.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 124 NLTVCPDGALFEQKGPVYVACQFPISLLQACSGMNDPDFGYSQGNPCILVKMNRIIGLKP 183
++ VC D G YV Q P +A MN F +G P ++ R L+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN---FDVIKGKPIRIMWSQRDPSLRK 95
Query: 184 EGVPRIDCVSKNEDIPNVAVY 204
GV + + ++ I N A+Y
Sbjct: 96 SGVGNVFIKNLDKSIDNKALY 116
>gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens]
Length = 1522
Score = 28.1 bits (61), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 83 VFPKPVTALEYTFSRSDPTSYAGYIEDLKKFL 114
+FPK T +T DPT Y+ Y++ KK L
Sbjct: 47 MFPKNFTNCTWTLENPDPTKYSIYLKFSKKDL 78
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,150,528
Number of Sequences: 37866
Number of extensions: 520974
Number of successful extensions: 911
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 884
Number of HSP's gapped (non-prelim): 17
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.