Search of human proteins with 126116598

Search of human proteins with 126116598

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|126116598 lipocalin 10 [Homo sapiens]
         (200 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|126116598 lipocalin 10 [Homo sapiens]                              398   e-111
gi|42714611 lipocalin 15 [Homo sapiens]                                52   3e-07
gi|39573716 lipocalin 6 [Homo sapiens]                                 44   1e-04
gi|38455402 lipocalin 2 [Homo sapiens]                                 32   0.36 
gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]           32   0.47 
gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]           32   0.47 
gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]           32   0.47 
gi|7657405 odorant binding protein 2A precursor [Homo sapiens]         32   0.47 
gi|7657407 odorant binding protein 2B [Homo sapiens]                   31   0.80 
gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]                30   1.0  
gi|4557859 somatostatin receptor 2 [Homo sapiens]                      30   1.4  
gi|169204289 PREDICTED: ovostatin [Homo sapiens]                       30   1.4  
gi|156104869 chloride channel 2 [Homo sapiens]                         29   2.3  
gi|56117842 sphingomyelin phosphodiesterase 1, acid lysosomal is...    29   2.3  
gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal is...    29   2.3  
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]                    28   6.8  
gi|4504963 lipocalin 1 precursor [Homo sapiens]                        28   6.8  
gi|38683855 pentatricopeptide repeat domain 3 [Homo sapiens]           27   8.9  
gi|183583553 collagen, type XXIX, alpha 1 [Homo sapiens]               27   8.9  
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]          27   8.9  

>gi|126116598 lipocalin 10 [Homo sapiens]
          Length = 200

 Score =  398 bits (1022), Expect = e-111
 Identities = 200/200 (100%), Positives = 200/200 (100%)

Query: 1   MRQGLLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPAR 60
           MRQGLLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPAR
Sbjct: 1   MRQGLLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPAR 60

Query: 61  DKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQ 120
           DKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQ
Sbjct: 61  DKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQ 120

Query: 121 EGVKGVKAFHVLSTDYSYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILG 180
           EGVKGVKAFHVLSTDYSYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILG
Sbjct: 121 EGVKGVKAFHVLSTDYSYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILG 180

Query: 181 LSKAAVILPKDASRTHTILP 200
           LSKAAVILPKDASRTHTILP
Sbjct: 181 LSKAAVILPKDASRTHTILP 200


>gi|42714611 lipocalin 15 [Homo sapiens]
          Length = 184

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 14/154 (9%)

Query: 36  NWNKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEV 95
           N  KFSG WY+++ A+D + FL  +D   +    ++  + G L V + F    GC   + 
Sbjct: 29  NAEKFSGLWYVVSMASDCRVFLGKKDHLSMSTRAIRPTEEGGLHVHMEFPGADGCNQVDA 88

Query: 96  ILRKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDY-SYGLVYLRLGRATQNYKN 154
              K G +  F             +    G     ++ TDY S+ ++Y+           
Sbjct: 89  EYLKVGSEGHF-------------RVPALGYLDVRIVDTDYSSFAVLYIYKELEGALSTM 135

Query: 155 LLLFHRQNVSSFQSLKEFMDACDILGLSKAAVIL 188
           + L+ R    S Q+LK F D    LGL K  +++
Sbjct: 136 VQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVM 169


>gi|39573716 lipocalin 6 [Homo sapiens]
          Length = 163

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 21/170 (12%)

Query: 4   GLLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPARDKR 63
           G L+LA  L LV V  A +    W  R    L+  +  G WY+LA A+  +GF   +D +
Sbjct: 2   GGLLLAAFLALVSVPRAQAV---WLGR----LDPEQLLGPWYVLAVASREKGFAMEKDMK 54

Query: 64  KLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGV 123
            +   VV +     LR L +   L GC    + L K     VF N               
Sbjct: 55  NVVGVVVTLTPENNLRTLSSQHGLGGCDQSVMDLIKRNSGWVFENPSI------------ 102

Query: 124 KGVKAFHVLSTDY-SYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEF 172
            GV    VL+T++  Y +++ +L    + +  + L+     +S +++  F
Sbjct: 103 -GVLELWVLATNFRDYAIIFTQLEFGDEPFNTVELYSLTETASQEAMGLF 151


>gi|38455402 lipocalin 2 [Homo sapiens]
          Length = 198

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 32/205 (15%)

Query: 1   MRQGLLVLALVLVLVLVLAAGSQVQEWYPRE-------SHALNWNKFSGFWYILATATDA 53
           M  GLL L L L+  L   A     +  P               N+F G WY++  A +A
Sbjct: 1   MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNA 60

Query: 54  QGFLPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYA 113
                 +D +K+ A++ ++ +     V     R K C   +  +R             + 
Sbjct: 61  I-LREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKC---DYWIR------------TFV 104

Query: 114 AGPREGQEGVKGVKAF--------HVLSTDYS-YGLVYLRLGRATQNYKNLLLFHRQNVS 164
            G + G+  +  +K++         V+ST+Y+ + +V+ +     + Y  + L+ R    
Sbjct: 105 PGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKEL 164

Query: 165 SFQSLKEFMDACDILGLSKAAVILP 189
           + +  + F+     LGL +  ++ P
Sbjct: 165 TSELKENFIRFSKSLGLPENHIVFP 189


>gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 21/180 (11%)

Query: 5   LLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPARDKRK 64
           +++L L L L LV A   Q +E     +   + +K SG WY +  A+D +          
Sbjct: 1   MMLLLLCLGLTLVCA---QEEENNDAVTSNFDLSKISGEWYSVLLASDCR---------- 47

Query: 65  LGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVK 124
                 K+ + G +RV +  + +    +  +  + +G       AC              
Sbjct: 48  -----EKIEEDGSMRVFV--KHIDYLGNSSLTFKLNGNCTEINLACKPTEKNAICSTDYN 100

Query: 125 GVKAFHVLSTDY-SYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILGLSK 183
           G+    +L TDY +Y   Y +  +  + +  L L+ R    S Q  + F+  C+  G+ K
Sbjct: 101 GLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDK 160


>gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 21/180 (11%)

Query: 5   LLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPARDKRK 64
           +++L L L L LV A   Q +E     +   + +K SG WY +  A+D +          
Sbjct: 1   MMLLLLCLGLTLVCA---QEEENNDAVTSNFDLSKISGEWYSVLLASDCR---------- 47

Query: 65  LGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVK 124
                 K+ + G +RV +  + +    +  +  + +G       AC              
Sbjct: 48  -----EKIEEDGSMRVFV--KHIDYLGNSSLTFKLNGNCTEINLACKPTEKNAICSTDYN 100

Query: 125 GVKAFHVLSTDY-SYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILGLSK 183
           G+    +L TDY +Y   Y +  +  + +  L L+ R    S Q  + F+  C+  G+ K
Sbjct: 101 GLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDK 160


>gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 21/180 (11%)

Query: 5   LLVLALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGFLPARDKRK 64
           +++L L L L LV A   Q +E     +   + +K SG WY +  A+D +          
Sbjct: 1   MMLLLLCLGLTLVCA---QEEENNDAVTSNFDLSKISGEWYSVLLASDCR---------- 47

Query: 65  LGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVK 124
                 K+ + G +RV +  + +    +  +  + +G       AC              
Sbjct: 48  -----EKIEEDGSMRVFV--KHIDYLGNSSLTFKLNGNCTEINLACKPTEKNAICSTDYN 100

Query: 125 GVKAFHVLSTDY-SYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDACDILGLSK 183
           G+    +L TDY +Y   Y +  +  + +  L L+ R    S Q  + F+  C+  G+ K
Sbjct: 101 GLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDK 160


>gi|7657405 odorant binding protein 2A precursor [Homo sapiens]
          Length = 170

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 32  SHALNWNKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVG--QLRVLLAFRRLKG 89
           S  L     +G WY+ A   D        D+R    S VKV  +G   L     F R   
Sbjct: 17  SFTLEEEDITGTWYVKAMVVDKDF---PEDRRPRKVSPVKVTALGGGNLEATFTFMREDR 73

Query: 90  CQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDYSYGLVYLRLGRAT 149
           C  +++++RK  +    G   AY         G K +    +  TD  Y        R  
Sbjct: 74  CIQKKILMRKTEEP---GKFSAYG--------GRKLIYLQELPGTD-DYVFYCKDQRRGG 121

Query: 150 QNYKNLLLFHRQNVSSFQSLKEFMDACDILGLSKAAVILP 189
             Y   L+    N ++ ++L+EF       GLS+  + +P
Sbjct: 122 LRYMGKLVGRNPN-TNLEALEEFKKLVQHKGLSEEDIFMP 160


>gi|7657407 odorant binding protein 2B [Homo sapiens]
          Length = 170

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 32  SHALNWNKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVG--QLRVLLAFRRLKG 89
           S  L     +G WY+ A   D        D+R    S VKV  +G  +L     F R   
Sbjct: 17  SFTLEEEDITGTWYVKAMVVDKDF---PEDRRPRKVSPVKVTALGGGKLEATFTFMREDR 73

Query: 90  CQSQEVILRK---DGKKPVFG 107
           C  +++++RK    GK   +G
Sbjct: 74  CIQKKILMRKTEEPGKYSAYG 94


>gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]
          Length = 190

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 12/152 (7%)

Query: 38  NKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVIL 97
           +KF G W+    A+++      +    +  SVV     G L +   F R   C+++ ++L
Sbjct: 37  DKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLL 96

Query: 98  RKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDY-SYGLVYLRLGRAT-QNYKNL 155
           +  G    +         P  G        +  V+ TDY  Y L+Y +  +   ++++  
Sbjct: 97  QPAGSLGSYS-----YRSPHWG-----STYSVSVVETDYDQYALLYSQGSKGPGEDFRMA 146

Query: 156 LLFHRQNVSSFQSLKEFMDACDILGLSKAAVI 187
            L+ R      +  ++F   C   G ++  ++
Sbjct: 147 TLYSRTQTPRAELKEKFTAFCKAQGFTEDTIV 178


>gi|4557859 somatostatin receptor 2 [Homo sapiens]
          Length = 369

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 8   LALVLVLVLVLAAGSQVQEWYPRESHALNWNKFSGFWY 45
           ++L+++L +++ AG +  +W  R S  +NW   SG WY
Sbjct: 169 VSLLVILPIMIYAGLRSNQW-GRSSCTINWPGESGAWY 205


>gi|169204289 PREDICTED: ovostatin [Homo sapiens]
          Length = 1353

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 16/87 (18%)

Query: 85  RRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDYSYGLVYLR 144
           RR    +S+E ++     KP +          + GQ+ V G+  F + +  ++Y  + L+
Sbjct: 49  RRSVAIRSRENVVFVQTDKPTY----------KPGQKDVNGIAQFFLDTYTFTYPNITLK 98

Query: 145 LGRATQNYKNLLLFHRQNVSSFQSLKE 171
                 + +N  +F RQNV+SF+++ +
Sbjct: 99  ------DPQNNRIFQRQNVTSFRNITQ 119


>gi|156104869 chloride channel 2 [Homo sapiens]
          Length = 898

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 12/120 (10%)

Query: 4   GLLVLALVLVLVLVLAAGSQVQEWYPRESH-ALNWNKFSGFWYILATATDAQGFLPARDK 62
           GLL+  +  V+   +AA  Q Q+W  R  + ++     +   Y +   T + GF      
Sbjct: 98  GLLMALVSWVMDYAIAACLQAQQWMSRGLNTSILLQYLAWVTYPVVLITFSAGFTQILAP 157

Query: 63  RKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEG 122
           + +G+ + ++  +           L+G   +E +  K     V G  CA  +G   G+EG
Sbjct: 158 QAVGSGIPEMKTI-----------LRGVVLKEYLTLKTFIAKVIGLTCALGSGMPLGKEG 206


>gi|56117842 sphingomyelin phosphodiesterase 1, acid lysosomal
          isoform 2 precursor [Homo sapiens]
          Length = 587

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 6  LVLALVLVLVLVLAAGSQVQEWYPRESHALN 36
          LVLAL L L L LA       W P E+H L+
Sbjct: 35 LVLALALALALALALSDSRVLWAPAEAHPLS 65


>gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal
          isoform 1 precursor [Homo sapiens]
          Length = 631

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 6  LVLALVLVLVLVLAAGSQVQEWYPRESHALN 36
          LVLAL L L L LA       W P E+H L+
Sbjct: 35 LVLALALALALALALSDSRVLWAPAEAHPLS 65


>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
          Length = 1507

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 80  VLLAFRRLKGCQSQEVILRKDGKKP 104
           V +  RRL+  Q QEV LR++ K+P
Sbjct: 172 VAIVLRRLRELQLQEVALRQENKRP 196


>gi|4504963 lipocalin 1 precursor [Homo sapiens]
          Length = 176

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 32/196 (16%)

Query: 1   MRQGLLVLALVLVLVL----VLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGF 56
           M+  LL ++L L+  L    +LA+  ++Q+              SG WY+ A   D +  
Sbjct: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQD-------------VSGTWYLKAMTVDRE-- 45

Query: 57  LPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGP 116
            P  +   +    +   + G L   +       CQ  + +L K  +         Y A  
Sbjct: 46  FPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPG------KYTA-- 97

Query: 117 REGQEGVKGVKAFHVLSTDYSYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDAC 176
               +G K V A+ + S    + + Y       +  + + L  R   ++ ++L++F  A 
Sbjct: 98  ----DGGKHV-AYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAA 152

Query: 177 DILGLSKAAVILPKDA 192
              GLS  ++++P+ +
Sbjct: 153 GARGLSTESILIPRQS 168


>gi|38683855 pentatricopeptide repeat domain 3 [Homo sapiens]
          Length = 689

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 140 LVYLRLGRATQNYKNLLLFHRQN-VSSFQSLKEFMDACDILGLSKAAVILPKDAS 193
           +++LR GR  + +K L LF + N +   + L E MD+  +      A+ + + AS
Sbjct: 581 ILFLRAGRTQEAWKMLGLFRKHNKIPRSELLNELMDSAKVSNSPSQAIEVVELAS 635


>gi|183583553 collagen, type XXIX, alpha 1 [Homo sapiens]
          Length = 2526

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 88   KGCQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVKGV 126
            KG + ++    + G+K V G+  +  +  REGQ G++GV
Sbjct: 1527 KGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGV 1565


>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
          Length = 4967

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 139  GLVYLRLGRATQNYKNL-LLFHRQNVSSFQSLKEFMDACDILGLS 182
            G+  L  G +T   K L  L  +++V  FQSL   M +C +L L+
Sbjct: 3762 GIAILNGGNSTVQQKMLDYLKEKKDVGFFQSLAGLMQSCSVLDLN 3806


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,594,997
Number of Sequences: 37866
Number of extensions: 251359
Number of successful extensions: 515
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 504
Number of HSP's gapped (non-prelim): 22
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.