Search of human proteins with 42544119

Search of human proteins with 42544119

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42544119 enolase superfamily 1 isoform rTS beta [Homo
sapiens]
         (443 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]     910   0.0  
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]         827   0.0  
gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]    702   0.0  
gi|169163737 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|113414000 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|113413229 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|82830424 gon-4-like isoform a [Homo sapiens]                        30   4.4  
gi|82830428 gon-4-like isoform b [Homo sapiens]                        30   4.4  
gi|226246554 hypothetical protein LOC643677 [Homo sapiens]             30   5.7  
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   5.7  
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   5.7  
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   5.7  
gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]           30   5.7  
gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]            30   5.7  
gi|20986490 YY1-associated protein isoform 3 [Homo sapiens]            30   5.7  
gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]           29   9.8  
gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting...    29   9.8  
gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]           29   9.8  
gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo sap...    29   9.8  

>gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]
          Length = 443

 Score =  910 bits (2351), Expect = 0.0
 Identities = 443/443 (100%), Positives = 443/443 (100%)

Query: 1   MVRGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGK 60
           MVRGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGK
Sbjct: 1   MVRGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGK 60

Query: 61  GTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLN 120
           GTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLN
Sbjct: 61  GTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLN 120

Query: 121 AVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREK 180
           AVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREK
Sbjct: 121 AVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREK 180

Query: 181 QMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDM 240
           QMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDM
Sbjct: 181 QMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDM 240

Query: 241 IGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIG 300
           IGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIG
Sbjct: 241 IGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIG 300

Query: 301 IATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVG 360
           IATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVG
Sbjct: 301 IATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVG 360

Query: 361 LCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKE 420
           LCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKE
Sbjct: 361 LCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKE 420

Query: 421 ESVKKHQYPDGEVWKKLLPAQEN 443
           ESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 421 ESVKKHQYPDGEVWKKLLPAQEN 443


>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
          Length = 450

 Score =  827 bits (2136), Expect = 0.0
 Identities = 405/419 (96%), Positives = 405/419 (96%), Gaps = 14/419 (3%)

Query: 25  ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI 84
           ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI
Sbjct: 46  ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI 105

Query: 85  VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR 144
           VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR
Sbjct: 106 VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR 165

Query: 145 MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL 204
           MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL
Sbjct: 166 MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL 225

Query: 205 KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM 264
           KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM
Sbjct: 226 KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM 285

Query: 265 SKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQF 324
           SKLAKFKPLWIEEPTSPDDILGHATISK              CHNRVIFKQLLQAKALQF
Sbjct: 286 SKLAKFKPLWIEEPTSPDDILGHATISK--------------CHNRVIFKQLLQAKALQF 331

Query: 325 LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV 384
           LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV
Sbjct: 332 LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV 391

Query: 385 CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 443
           CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 392 CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450


>gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]
          Length = 361

 Score =  702 bits (1813), Expect = 0.0
 Identities = 341/343 (99%), Positives = 342/343 (99%)

Query: 101 LRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 160
           L+ IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT
Sbjct: 19  LKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 78

Query: 161 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 220
           EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK
Sbjct: 79  EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 138

Query: 221 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 280
           VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS
Sbjct: 139 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 198

Query: 281 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 340
           PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS
Sbjct: 199 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 258

Query: 341 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 400
           VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM
Sbjct: 259 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 318

Query: 401 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 443
           IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 319 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 361


>gi|169163737 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 271 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 304
           +P W+E  T+P  +LG A+  + L   GIG  +G
Sbjct: 27  RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60


>gi|113414000 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 271 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 304
           +P W+E  T+P  +LG A+  + L   GIG  +G
Sbjct: 27  RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60


>gi|113413229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 271 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 304
           +P W+E  T+P  +LG A+  + L   GIG  +G
Sbjct: 27  RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60


>gi|82830424 gon-4-like isoform a [Homo sapiens]
          Length = 2240

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 243 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 296
           P KT+   AN+   +P+ V W+   +K        P+   +  +P D +        L+ 
Sbjct: 776 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKIVFTKAEDNLLA 835

Query: 297 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 338
           LG+    G +  N +I K LL  K    L +   R+ ++N N
Sbjct: 836 LGLKHFEGTEFPNPLISKYLLTCKTAHQLTV---RIKNLNMN 874


>gi|82830428 gon-4-like isoform b [Homo sapiens]
          Length = 1529

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 243 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 296
           P KT+   AN+   +P+ V W+   +K        P+   +  +P D +        L+ 
Sbjct: 776 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKIVFTKAEDNLLA 835

Query: 297 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 338
           LG+    G +  N +I K LL  K    L +   R+ ++N N
Sbjct: 836 LGLKHFEGTEFPNPLISKYLLTCKTAHQLTV---RIKNLNMN 874


>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
          Length = 7081

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 130  EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 185
            +G+    L +DM+ +ML  C D +     ++D+L  +  L+   K Q  K + +K    +
Sbjct: 5010 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 5068

Query: 186  GYPAYTTS 193
            G P+  TS
Sbjct: 5069 GLPSINTS 5076


>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 130  EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 185
            +G+    L +DM+ +ML  C D +     ++D+L  +  L+   K Q  K + +K    +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916

Query: 186  GYPAYTTS 193
            G P+  TS
Sbjct: 4917 GLPSINTS 4924


>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 130  EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 185
            +G+    L +DM+ +ML  C D +     ++D+L  +  L+   K Q  K + +K    +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916

Query: 186  GYPAYTTS 193
            G P+  TS
Sbjct: 4917 GLPSINTS 4924


>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 130  EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 185
            +G+    L +DM+ +ML  C D +     ++D+L  +  L+   K Q  K + +K    +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916

Query: 186  GYPAYTTS 193
            G P+  TS
Sbjct: 4917 GLPSINTS 4924


>gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]
          Length = 748

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 26/166 (15%)

Query: 182 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 229
           +LA G  A+  +CA++     +++ + +L    ++DG  +           V VG +L  
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187

Query: 230 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD--- 283
                 +  D++G + T+     QR  +   P    W+++    K  WI E  +PDD   
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKI 242

Query: 284 -ILGHATISKALVPLG-IGIA-TGEQCHNRVIFKQLLQAKALQFLQ 326
                 T  +A   LG + ++  G+ C N V  ++ L  K   FL+
Sbjct: 243 YFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLK 288


>gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]
          Length = 749

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 26/166 (15%)

Query: 182 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 229
           +LA G  A+  +CA++     +++ + +L    ++DG  +           V VG +L  
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187

Query: 230 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD--- 283
                 +  D++G + T+     QR  +   P    W+++    K  WI E  +PDD   
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKI 242

Query: 284 -ILGHATISKALVPLG-IGIA-TGEQCHNRVIFKQLLQAKALQFLQ 326
                 T  +A   LG + ++  G+ C N V  ++ L  K   FL+
Sbjct: 243 YFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLK 288


>gi|20986490 YY1-associated protein isoform 3 [Homo sapiens]
          Length = 750

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 243 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 296
           P KT+   AN+   +P+ V W+   +K        P+   +  +P D +        L+ 
Sbjct: 187 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKILFTKAEDNLLA 246

Query: 297 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 338
           LG+    G +  N +I K LL  K  + L +   R+ ++N N
Sbjct: 247 LGLKHFEGTEFLNPLISKYLLTCKTARQLTV---RIKNLNMN 285


>gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]
          Length = 144

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106


>gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting,
           mitochondrial F0 complex, subunit d [Homo sapiens]
          Length = 144

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106


>gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
          Length = 160

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106


>gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
           sapiens]
          Length = 144

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,436,918
Number of Sequences: 37866
Number of extensions: 750392
Number of successful extensions: 1604
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1597
Number of HSP's gapped (non-prelim): 19
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.