Search of human proteins with 42476108

Search of human proteins with 42476108

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]
         (278 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]                 570   e-163
gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]                 570   e-163
gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]                 546   e-155
gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]                 315   2e-86
gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]                 266   2e-71
gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]                 253   1e-67
gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]                 253   1e-67
gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]            217   1e-56
gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]            201   6e-52
gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]           201   6e-52
gi|52353274 olfactory receptor, family 6, subfamily X, member 1 ...    33   0.36 
gi|61744454 retinal G-protein coupled receptor isoform 2 [Homo s...    31   1.0  
gi|61744452 retinal G-protein coupled receptor isoform 3 [Homo s...    31   1.0  
gi|164607152 olfactory receptor, family 2, subfamily C, member 3...    31   1.4  
gi|59710104 plexin A3 [Homo sapiens]                                   30   1.8  
gi|21361329 retinal G-protein coupled receptor isoform 1 [Homo s...    29   5.2  
gi|4502669 CD3 antigen, delta subunit isoform A precursor [Homo ...    29   5.2  
gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]        29   5.2  
gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]         29   5.2  
gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens]               28   8.8  
gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens]         28   8.8  

>gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]
          Length = 278

 Score =  570 bits (1468), Expect = e-163
 Identities = 278/278 (100%), Positives = 278/278 (100%)

Query: 1   MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT 60
           MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT
Sbjct: 1   MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT 60

Query: 61  YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT 120
           YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT
Sbjct: 61  YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT 120

Query: 121 TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF 180
           TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF
Sbjct: 121 TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF 180

Query: 181 GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA 240
           GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA
Sbjct: 181 GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA 240

Query: 241 YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278
           YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
Sbjct: 241 YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278


>gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]
          Length = 278

 Score =  570 bits (1468), Expect = e-163
 Identities = 278/278 (100%), Positives = 278/278 (100%)

Query: 1   MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT 60
           MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT
Sbjct: 1   MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQT 60

Query: 61  YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT 120
           YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT
Sbjct: 61  YFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKIT 120

Query: 121 TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF 180
           TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF
Sbjct: 121 TCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQF 180

Query: 181 GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA 240
           GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA
Sbjct: 181 GIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWA 240

Query: 241 YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278
           YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
Sbjct: 241 YVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278


>gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]
          Length = 267

 Score =  546 bits (1406), Expect = e-155
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL
Sbjct: 2   GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 61

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132
           DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM
Sbjct: 62  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 121

Query: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKIC 192
           LTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKIC
Sbjct: 122 LTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKIC 181

Query: 193 TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYE 252
           TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYE
Sbjct: 182 TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYE 241

Query: 253 DIKSKEEQELHDIHSTRSKERLNAYT 278
           DIKSKEEQELHDIHSTRSKERLNAYT
Sbjct: 242 DIKSKEEQELHDIHSTRSKERLNAYT 267


>gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]
          Length = 328

 Score =  315 bits (808), Expect = 2e-86
 Identities = 155/276 (56%), Positives = 209/276 (75%), Gaps = 18/276 (6%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 118

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 119 LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 178

Query: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 184
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 179 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 236

Query: 185 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 242
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++H+LM+LS+NWAY+
Sbjct: 237 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYL 293

Query: 243 KDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278
           KDA +MQ Y+DIK+KEEQEL DI S RSKE+LN+YT
Sbjct: 294 KDASKMQAYQDIKAKEEQELQDIQS-RSKEQLNSYT 328


>gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]
          Length = 265

 Score =  266 bits (679), Expect = 2e-71
 Identities = 131/252 (51%), Positives = 182/252 (72%), Gaps = 17/252 (6%)

Query: 2   EENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTY 61
           EEN E+ Q +KGCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +
Sbjct: 10  EENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQH 69

Query: 62  FEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITT 121
           F  +  A D   +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T 
Sbjct: 70  F--STNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTA 127

Query: 122 CGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANL 173
           CGRC+S  F+ LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +
Sbjct: 128 CGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QI 185

Query: 174 CLDLRQFGIVTIGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHY 231
           C+D+RQ+GI+       KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++ Y
Sbjct: 186 CVDIRQYGIIPWNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALLIY 242

Query: 232 LMVLSANWAYVK 243
           +M  + N+A +K
Sbjct: 243 MMATTYNYAVLK 254


>gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]
          Length = 246

 Score =  253 bits (647), Expect = 1e-67
 Identities = 125/241 (51%), Positives = 174/241 (72%), Gaps = 17/241 (7%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 2   GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 59

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 60  LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 119

Query: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 184
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 120 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 177

Query: 185 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 242
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++ Y+M  + N+A +
Sbjct: 178 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVL 234

Query: 243 K 243
           K
Sbjct: 235 K 235


>gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]
          Length = 305

 Score =  253 bits (647), Expect = 1e-67
 Identities = 125/241 (51%), Positives = 174/241 (72%), Gaps = 17/241 (7%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 118

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 119 LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 178

Query: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 184
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 179 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 236

Query: 185 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 242
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++ Y+M  + N+A +
Sbjct: 237 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVL 293

Query: 243 K 243
           K
Sbjct: 294 K 294


>gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]
          Length = 242

 Score =  217 bits (552), Expect = 1e-56
 Identities = 106/245 (43%), Positives = 159/245 (64%), Gaps = 10/245 (4%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           G  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D  
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDYE 59

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132
            +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+ +SA F+ 
Sbjct: 60  YLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVG 119

Query: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTICR-----NTTLVEGANLCLDLRQFGIVTIGE 187
           +TY   + WL V A +++PVY+YFN WT C+     + T     +LC D R +G++    
Sbjct: 120 ITYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNA 179

Query: 188 -EKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDAC 246
              K+C    N L +C++ E  MTFHLFI A  GA A +++++ +++  + N+A +K   
Sbjct: 180 FPGKVC--GSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMG 237

Query: 247 RMQKY 251
           R  K+
Sbjct: 238 RGTKF 242


>gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  201 bits (511), Expect = 6e-52
 Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 45/280 (16%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           G  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D  
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDYE 59

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGR-------- 124
            +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+        
Sbjct: 60  YLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTG 119

Query: 125 ---------------------CVSAW------FIMLTYLFMLAWLGVTAFTSLPVYMYFN 157
                                C+  W      F+ +TY   + WL V A +++PVY+YFN
Sbjct: 120 GQKGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFN 179

Query: 158 LWTICRNT-----TLVEGANLCLDLRQFGIVTIGE-EKKICTVSENFLRMCESTELNMTF 211
            WT C++      T     +LC D R +G++       K+C    N L +C++ E  MTF
Sbjct: 180 TWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVC--GSNLLSICKTAEFQMTF 237

Query: 212 HLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKY 251
           HLFI A  GA A +++++ +++  + N+A +K   R  K+
Sbjct: 238 HLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 277


>gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  201 bits (511), Expect = 6e-52
 Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 45/280 (16%)

Query: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72
           G  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D  
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDYE 59

Query: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGR-------- 124
            +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+        
Sbjct: 60  YLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTG 119

Query: 125 ---------------------CVSAW------FIMLTYLFMLAWLGVTAFTSLPVYMYFN 157
                                C+  W      F+ +TY   + WL V A +++PVY+YFN
Sbjct: 120 GQKGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFN 179

Query: 158 LWTICRNT-----TLVEGANLCLDLRQFGIVTIGE-EKKICTVSENFLRMCESTELNMTF 211
            WT C++      T     +LC D R +G++       K+C    N L +C++ E  MTF
Sbjct: 180 TWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVC--GSNLLSICKTAEFQMTF 237

Query: 212 HLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKY 251
           HLFI A  GA A +++++ +++  + N+A +K   R  K+
Sbjct: 238 HLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 277


>gi|52353274 olfactory receptor, family 6, subfamily X, member 1
           [Homo sapiens]
          Length = 312

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 38/168 (22%), Positives = 61/168 (36%), Gaps = 25/168 (14%)

Query: 92  FFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLP 151
           +F    L  +E ++TT  I  L G F +     C+S   +   + F   ++G T F  L 
Sbjct: 58  YFFLCNLSFLEIWYTTTVIPKLLGTFVVARTVICMSCCLLQAFFHF---FVGTTEFLILT 114

Query: 152 VYMYFNLWTICR--NTTLVEGANLCLDLR------QFGIVTIGEEKKI------------ 191
           +  +    TIC   +   +  + LCL L        F IV       I            
Sbjct: 115 IMSFDRYLTICNPLHHPTIMTSKLCLQLALSSWVVGFTIVFCQTMLLIQLPFCGNNVISH 174

Query: 192 --CTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSA 237
             C V  +    C  T +     +    L   G+ +  M+ Y+ +LSA
Sbjct: 175 FYCDVGPSLKAACIDTSILELLGVIATILVIPGSLLFNMISYIYILSA 222


>gi|61744454 retinal G-protein coupled receptor isoform 2 [Homo
           sapiens]
          Length = 291

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 202 CESTELNMTFHLFIV--ALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYE 252
           C++ EL    HL ++  ALA +G ++ A+V     L   W Y  D C+   ++
Sbjct: 42  CKTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQ 94


>gi|61744452 retinal G-protein coupled receptor isoform 3 [Homo
           sapiens]
          Length = 253

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 202 CESTELNMTFHLFIV--ALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYE 252
           C++ EL    HL ++  ALA +G ++ A+V     L   W Y  D C+   ++
Sbjct: 42  CKTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQ 94


>gi|164607152 olfactory receptor, family 2, subfamily C, member 3
           [Homo sapiens]
          Length = 320

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 92  FFVYGILLMVEGFFTTGAIK----DLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAF 147
           +F    L  ++  FTT  +     +L+G  K  + G CV  ++I         WLG T  
Sbjct: 61  YFFLANLSFLDMSFTTSIVPQLLANLWGPQKTISYGGCVVQFYIS-------HWLGATEC 113

Query: 148 TSLPVYMYFNLWTICR--NTTLVEGANLCLDL 177
             L    Y     ICR  + T++    LCL L
Sbjct: 114 VLLATMSYDRYAAICRPLHYTVIMHPQLCLGL 145


>gi|59710104 plexin A3 [Homo sapiens]
          Length = 1871

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 13/58 (22%)

Query: 70  DTLDVFTMIDIFKYVIYGIAAAFFVYGILLMV-----------EGFFTTGAIKDLYGD 116
           DTL ++   DI  Y IYG  +A FVY + L +           E FFT+  ++   GD
Sbjct: 214 DTLSLYPAFDI--YYIYGFVSASFVYFLTLQLDTQQTLLDTAGEKFFTSKIVRMCAGD 269


>gi|21361329 retinal G-protein coupled receptor isoform 1 [Homo
           sapiens]
          Length = 295

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 202 CESTELNMTFHLFIVALAGA------GAAVIAMVHYLMVLSANWAYVKDACRMQKYE 252
           C++ EL    HL +++LA A       A V A    L V    W Y  D C+   ++
Sbjct: 42  CKTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRVSHRRWPYGSDGCQAHGFQ 98


>gi|4502669 CD3 antigen, delta subunit isoform A precursor [Homo
           sapiens]
          Length = 171

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 12  KGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEA--LSGTVN 56
           + C E     + GI    +IAT+LL  GV  FC  GHE   LSG  +
Sbjct: 94  QSCVELDPATVAGIIVTDVIATLLLALGV--FCFAGHETGRLSGAAD 138


>gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/50 (30%), Positives = 29/50 (58%)

Query: 214 FIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELH 263
           F+    G+  A++ ++  ++VL  ++   + A R  K  +IKSKEE+ L+
Sbjct: 153 FLALAIGSACALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLN 202


>gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/50 (30%), Positives = 29/50 (58%)

Query: 214 FIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELH 263
           F+    G+  A++ ++  ++VL  ++   + A R  K  +IKSKEE+ L+
Sbjct: 153 FLALAIGSACALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLN 202


>gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens]
          Length = 564

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 25/122 (20%)

Query: 126 VSAWFIMLTYLFMLAWLGVTAFTSLPVYM--------YFNLWTICRNTTLVEGANLCLDL 177
           V+ WF   + LF++ WLG+  F  +  ++        Y+    +         + LCL+ 
Sbjct: 6   VNHWF---SVLFLVVWLGLNVFLFVDAFLKYEKADKYYYTRKILGSTLACARASALCLNF 62

Query: 178 RQFGIVTIGEEKKICTVSENFLR----MCEST-----ELNMTFHLFIVALAGAGAAVIAM 228
               I+       +C    +FLR     C  T     + N+TFH  +  +     A+  +
Sbjct: 63  NSTLILL-----PVCRNLLSFLRGTCSFCSRTLRKQLDHNLTFHKLVAYMICLHTAIHII 117

Query: 229 VH 230
            H
Sbjct: 118 AH 119


>gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens]
          Length = 515

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 25/122 (20%)

Query: 126 VSAWFIMLTYLFMLAWLGVTAFTSLPVYM--------YFNLWTICRNTTLVEGANLCLDL 177
           V+ WF   + LF++ WLG+  F  +  ++        Y+    +         + LCL+ 
Sbjct: 6   VNHWF---SVLFLVVWLGLNVFLFVDAFLKYEKADKYYYTRKILGSTLACARASALCLNF 62

Query: 178 RQFGIVTIGEEKKICTVSENFLR----MCEST-----ELNMTFHLFIVALAGAGAAVIAM 228
               I+       +C    +FLR     C  T     + N+TFH  +  +     A+  +
Sbjct: 63  NSTLILL-----PVCRNLLSFLRGTCSFCSRTLRKQLDHNLTFHKLVAYMICLHTAIHII 117

Query: 229 VH 230
            H
Sbjct: 118 AH 119


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.140    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,540,793
Number of Sequences: 37866
Number of extensions: 364229
Number of successful extensions: 1213
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1177
Number of HSP's gapped (non-prelim): 23
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.