Search of human proteins with 41349501

Search of human proteins with 41349501

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]            496   e-141
gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]            479   e-135
gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]           479   e-135
gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]                 295   2e-80
gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]                 293   7e-80
gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]                 293   7e-80
gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]                 281   5e-76
gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]                 219   2e-57
gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]                 217   8e-57
gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]                 217   8e-57
gi|115298678 complement component 3 precursor [Homo sapiens]           29   3.2  
gi|169214179 PREDICTED: similar to complement component 3 [Homo ...    29   3.2  
gi|222418585 zinc finger protein 814 [Homo sapiens]                    28   5.5  
gi|239757378 PREDICTED: similar to zinc finger protein 587 [Homo...    28   5.5  
gi|46358076 zinc finger protein 552 [Homo sapiens]                     28   5.5  
gi|18641343 tripartite motif protein 34 isoform 2 [Homo sapiens]       28   9.4  
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]       28   9.4  
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]       28   9.4  
gi|51477690 tripartite motif-containing 6 and tripartite motif-c...    28   9.4  

>gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]
          Length = 242

 Score =  496 bits (1278), Expect = e-141
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60
           MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY
Sbjct: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60

Query: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGI 120
           LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGI
Sbjct: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGI 120

Query: 121 TYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAF 180
           TYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAF
Sbjct: 121 TYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAF 180

Query: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGT 240
           PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGT
Sbjct: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGT 240

Query: 241 KF 242
           KF
Sbjct: 241 KF 242


>gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  479 bits (1232), Expect = e-135
 Identities = 242/277 (87%), Positives = 242/277 (87%), Gaps = 35/277 (12%)

Query: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60
           MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY
Sbjct: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60

Query: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSAT---- 116
           LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSAT    
Sbjct: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTGG 120

Query: 117 -------------------------------FVGITYALTVVWLLVFACSAVPVYIYFNT 145
                                          FVGITYALTVVWLLVFACSAVPVYIYFNT
Sbjct: 121 QKGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFNT 180

Query: 146 WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 205
           WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF
Sbjct: 181 WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 240

Query: 206 IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 242
           IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF
Sbjct: 241 IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 277


>gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  479 bits (1232), Expect = e-135
 Identities = 242/277 (87%), Positives = 242/277 (87%), Gaps = 35/277 (12%)

Query: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60
           MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY
Sbjct: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60

Query: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSAT---- 116
           LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSAT    
Sbjct: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTGG 120

Query: 117 -------------------------------FVGITYALTVVWLLVFACSAVPVYIYFNT 145
                                          FVGITYALTVVWLLVFACSAVPVYIYFNT
Sbjct: 121 QKGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFNT 180

Query: 146 WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 205
           WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF
Sbjct: 181 WTTCQSIAFPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 240

Query: 206 IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 242
           IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF
Sbjct: 241 IAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF 277


>gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]
          Length = 246

 Score =  295 bits (756), Expect = 2e-80
 Identities = 137/239 (57%), Positives = 174/239 (72%), Gaps = 1/239 (0%)

Query: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEY 60
           MG  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  
Sbjct: 1   MGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHAL 60

Query: 61  LINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGI 120
           L  VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S  FV +
Sbjct: 61  LSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFL 120

Query: 121 TYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFP-SKTSASIGSLCADARMYGVLPWNA 179
           TY L V WL VF  SAVPV++++N W+TC+ I  P +  +  +  +C D R YG++PWNA
Sbjct: 121 TYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNA 180

Query: 180 FPGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGR 238
           FPGK+CGS L +IC T EF M++HLFI A  GA AT+++LL +M+A TYN+AVLK   R
Sbjct: 181 FPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 239


>gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]
          Length = 305

 Score =  293 bits (751), Expect = 7e-80
 Identities = 136/238 (57%), Positives = 173/238 (72%), Gaps = 1/238 (0%)

Query: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120

Query: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGIT 121
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S  FV +T
Sbjct: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180

Query: 122 YALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFP-SKTSASIGSLCADARMYGVLPWNAF 180
           Y L V WL VF  SAVPV++++N W+TC+ I  P +  +  +  +C D R YG++PWNAF
Sbjct: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240

Query: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGR 238
           PGK+CGS L +IC T EF M++HLFI A  GA AT+++LL +M+A TYN+AVLK   R
Sbjct: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 298


>gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]
          Length = 265

 Score =  293 bits (751), Expect = 7e-80
 Identities = 136/238 (57%), Positives = 173/238 (72%), Gaps = 1/238 (0%)

Query: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 21  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 80

Query: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGIT 121
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S  FV +T
Sbjct: 81  SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 140

Query: 122 YALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFP-SKTSASIGSLCADARMYGVLPWNAF 180
           Y L V WL VF  SAVPV++++N W+TC+ I  P +  +  +  +C D R YG++PWNAF
Sbjct: 141 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 200

Query: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGR 238
           PGK+CGS L +IC T EF M++HLFI A  GA AT+++LL +M+A TYN+AVLK   R
Sbjct: 201 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 258


>gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]
          Length = 328

 Score =  281 bits (718), Expect = 5e-76
 Identities = 130/234 (55%), Positives = 169/234 (72%), Gaps = 1/234 (0%)

Query: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120

Query: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGIT 121
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S  FV +T
Sbjct: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180

Query: 122 YALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFP-SKTSASIGSLCADARMYGVLPWNAF 180
           Y L V WL VF  SAVPV++++N W+TC+ I  P +  +  +  +C D R YG++PWNAF
Sbjct: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240

Query: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLK 234
           PGK+CGS L +IC T EF M++HLFI A  GA AT+++L+ F++  + N+A LK
Sbjct: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLK 294


>gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]
          Length = 267

 Score =  219 bits (557), Expect = 2e-57
 Identities = 107/246 (43%), Positives = 160/246 (65%), Gaps = 10/246 (4%)

Query: 1   MGLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDY 58
           MG  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D 
Sbjct: 1   MGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDT 60

Query: 59  EYLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFV 118
             +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+ +SA F+
Sbjct: 61  LDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFI 120

Query: 119 GITYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWN 178
            +TY   + WL V A +++PVY+YFN WT C+     + T     +LC D R +G++   
Sbjct: 121 MLTYLFMLAWLGVTAFTSLPVYMYFNLWTICR-----NTTLVEGANLCLDLRQFGIVTIG 175

Query: 179 AFPGKVC--GSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLM 236
               K+C    N L +C++ E  MTFHLFI A  GA A +++++ +++  + N+A +K  
Sbjct: 176 E-EKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDA 234

Query: 237 GRGTKF 242
            R  K+
Sbjct: 235 CRMQKY 240


>gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]
          Length = 278

 Score =  217 bits (552), Expect = 8e-57
 Identities = 106/245 (43%), Positives = 159/245 (64%), Gaps = 10/245 (4%)

Query: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDYE 59
           G  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D  
Sbjct: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72

Query: 60  YLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVG 119
            +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+ +SA F+ 
Sbjct: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132

Query: 120 ITYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNA 179
           +TY   + WL V A +++PVY+YFN WT C+     + T     +LC D R +G++    
Sbjct: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTICR-----NTTLVEGANLCLDLRQFGIVTIGE 187

Query: 180 FPGKVC--GSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMG 237
              K+C    N L +C++ E  MTFHLFI A  GA A +++++ +++  + N+A +K   
Sbjct: 188 -EKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDAC 246

Query: 238 RGTKF 242
           R  K+
Sbjct: 247 RMQKY 251


>gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]
          Length = 278

 Score =  217 bits (552), Expect = 8e-57
 Identities = 106/245 (43%), Positives = 159/245 (64%), Gaps = 10/245 (4%)

Query: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYF--SKNYQDYE 59
           G  ECC +CL G P+ASL+AT L + GVALFCGCGHEAL+GT  +++TYF  ++   D  
Sbjct: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72

Query: 60  YLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVG 119
            +  +I  F+YVIYG A+ FF+YG LL+ EGF+TTGA++ ++GD+K T CG+ +SA F+ 
Sbjct: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132

Query: 120 ITYALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFPSKTSASIGSLCADARMYGVLPWNA 179
           +TY   + WL V A +++PVY+YFN WT C+     + T     +LC D R +G++    
Sbjct: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTICR-----NTTLVEGANLCLDLRQFGIVTIGE 187

Query: 180 FPGKVC--GSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMG 237
              K+C    N L +C++ E  MTFHLFI A  GA A +++++ +++  + N+A +K   
Sbjct: 188 -EKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDAC 246

Query: 238 RGTKF 242
           R  K+
Sbjct: 247 RMQKY 251


>gi|115298678 complement component 3 precursor [Homo sapiens]
          Length = 1663

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 136  AVPVYIYFNTWTTCQSIAFPSKTSASIGSLCAD 168
            AV VY Y+N   +C     P K    +  LC D
Sbjct: 1476 AVKVYAYYNLEESCTRFYHPEKEDGKLNKLCRD 1508


>gi|169214179 PREDICTED: similar to complement component 3 [Homo
           sapiens]
          Length = 390

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 136 AVPVYIYFNTWTTCQSIAFPSKTSASIGSLCAD 168
           AV VY Y+N   +C     P K    +  LC D
Sbjct: 203 AVKVYAYYNLEESCTRFYHPEKEDGKLNKLCRD 235


>gi|222418585 zinc finger protein 814 [Homo sapiens]
          Length = 855

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 146 WTTCQSIAFPSKTSASIG-SLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFH 203
           W   +  A PSK S  I         M GV P  A P ++CG  L  I   A+ Q T H
Sbjct: 57  WCGVEDEAAPSKQSIYIQRETQVRTPMAGVSPKKAHPCEMCGPILGDILHVADHQGTHH 115


>gi|239757378 PREDICTED: similar to zinc finger protein 587 [Homo
           sapiens]
          Length = 577

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 146 WTTCQSIAFPSKTSASIG-SLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFH 203
           W   +  A PSK S  I         M GV P  A P ++CG  L  I   A+ Q T H
Sbjct: 57  WCGVEDEAAPSKQSIYIQRETQVRTPMTGVSPKKAHPCEMCGPILGDILHVADHQGTHH 115


>gi|46358076 zinc finger protein 552 [Homo sapiens]
          Length = 407

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 146 WTTCQSIAFPSKTSASIG-SLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFH 203
           W   +  A PSK S  I         M GV P  A P ++CG  L  I   A+ Q T H
Sbjct: 56  WCGVEDEAAPSKQSIYIQRETQVRTPMAGVSPKKAHPCEMCGPILGDILHVADHQGTHH 114


>gi|18641343 tripartite motif protein 34 isoform 2 [Homo sapiens]
          Length = 243

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 100 IFGDYKTTICGKGLSATFVGITYALTVVWLLVFACSAVPVYIYFNTW 146
           +F DY+  I       +F  +T   ++++     C + PVY YFN W
Sbjct: 190 VFLDYEAGI------VSFFNVTSHGSLIYKFSKCCFSQPVYPYFNPW 230


>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 100 IFGDYKTTICGKGLSATFVGITYALTVVWLLVFACSAVPVYIYFNTW 146
           +F DY+  I       +F  +T   ++++     C + PVY YFN W
Sbjct: 435 VFLDYEAGI------VSFFNVTSHGSLIYKFSKCCFSQPVYPYFNPW 475


>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 100 IFGDYKTTICGKGLSATFVGITYALTVVWLLVFACSAVPVYIYFNTW 146
           +F DY+  I       +F  +T   ++++     C + PVY YFN W
Sbjct: 435 VFLDYEAGI------VSFFNVTSHGSLIYKFSKCCFSQPVYPYFNPW 475


>gi|51477690 tripartite motif-containing 6 and tripartite
           motif-containing 34 [Homo sapiens]
          Length = 842

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 100 IFGDYKTTICGKGLSATFVGITYALTVVWLLVFACSAVPVYIYFNTW 146
           +F DY+  I       +F  +T   ++++     C + PVY YFN W
Sbjct: 789 VFLDYEAGI------VSFFNVTSHGSLIYKFSKCCFSQPVYPYFNPW 829


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.141    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,264,159
Number of Sequences: 37866
Number of extensions: 327642
Number of successful extensions: 973
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 949
Number of HSP's gapped (non-prelim): 19
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.