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Search of human proteins with 41151642
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41151642 PREDICTED: hypothetical protein [Homo sapiens]
(273 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217271 PREDICTED: hypothetical protein [Homo sapiens] 550 e-157
gi|89061101 PREDICTED: hypothetical protein [Homo sapiens] 550 e-157
gi|41151642 PREDICTED: hypothetical protein [Homo sapiens] 550 e-157
gi|38016919 hypothetical protein LOC29035 [Homo sapiens] 360 e-99
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 39 0.004
gi|7706687 Enah/Vasp-like [Homo sapiens] 39 0.005
gi|56549694 enabled homolog isoform a [Homo sapiens] 38 0.008
gi|39930375 enabled homolog isoform b [Homo sapiens] 38 0.008
gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo ... 36 0.032
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 36 0.032
gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo ... 36 0.032
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 36 0.032
gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo ... 36 0.032
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 36 0.032
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 36 0.041
gi|47132519 Ras association and pleckstrin homology domains 1 is... 36 0.041
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 35 0.054
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 35 0.054
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 35 0.054
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.070
gi|4504465 homeobox B2 [Homo sapiens] 35 0.070
gi|239754630 PREDICTED: hypothetical protein [Homo sapiens] 35 0.092
gi|239749175 PREDICTED: hypothetical protein XP_002346935 [Homo ... 35 0.092
gi|239743250 PREDICTED: hypothetical protein XP_002342811 [Homo ... 35 0.092
gi|239508925 PREDICTED: hypothetical protein [Homo sapiens] 35 0.092
gi|158534059 formin binding protein 4 [Homo sapiens] 35 0.092
gi|11386183 WAS protein family, member 2 [Homo sapiens] 34 0.12
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 34 0.12
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 34 0.12
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 34 0.12
>gi|169217271 PREDICTED: hypothetical protein [Homo sapiens]
Length = 273
Score = 550 bits (1417), Expect = e-157
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF
Sbjct: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
Query: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR
Sbjct: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
Query: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS
Sbjct: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
Query: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL
Sbjct: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
Query: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV
Sbjct: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
>gi|89061101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 273
Score = 550 bits (1417), Expect = e-157
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF
Sbjct: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
Query: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR
Sbjct: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
Query: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS
Sbjct: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
Query: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL
Sbjct: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
Query: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV
Sbjct: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
>gi|41151642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 273
Score = 550 bits (1417), Expect = e-157
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF
Sbjct: 1 MEEQQKEGEAEVAEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHLF 60
Query: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR
Sbjct: 61 QISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVGHQRR 120
Query: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS
Sbjct: 121 IKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
Query: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL
Sbjct: 181 VDVDLQPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSEEL 240
Query: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV
Sbjct: 241 ALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
>gi|38016919 hypothetical protein LOC29035 [Homo sapiens]
Length = 275
Score = 360 bits (923), Expect = e-99
Identities = 189/280 (67%), Positives = 219/280 (78%), Gaps = 12/280 (4%)
Query: 1 MEEQQKEGEAEVAEH----WFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKL 56
MEE+++EGEAE+ EH WFSKWERQCLAEAEQ+EQLPPELQEEAAA A + ++QKL
Sbjct: 1 MEERKEEGEAEIQEHGPEHWFSKWERQCLAEAEQDEQLPPELQEEAAAA-AQPEHKQQKL 59
Query: 57 WHLFQISATAVAQLYKDSGCQQQGLSMWDPFQNAAMAVTSLYKESGDAHQRSFDLGVQVG 116
WHLFQ SATAVAQLYKD CQQ GLS+W PFQNAA AVT+LYKES D HQRSFD+G+Q+G
Sbjct: 60 WHLFQNSATAVAQLYKDRVCQQPGLSLWVPFQNAATAVTNLYKESVDTHQRSFDIGIQIG 119
Query: 117 HQRRIKDVLEWVKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATE 176
+QRR KDVL WVKK R TIRREDLISFLCGKV PPPR R PP+ ++A +TE
Sbjct: 120 YQRRNKDVLAWVKKRRRTIRREDLISFLCGKV----PPPRNSRAPPRLTVVSPNRATSTE 175
Query: 177 SSSSVDVDLQPFQEAIALHGLSGAMAGISMRS---GDSPQDSGVASSGRRKTSFLEDDLN 233
+SSSV+ DLQPF+EAIALHGLSGAMA IS+RS G S +++ RR+ + DLN
Sbjct: 176 TSSSVETDLQPFREAIALHGLSGAMASISVRSSTPGSPTHVSSGSNASRRRNGLHDVDLN 235
Query: 234 PFDSEELALHLDSGGIRKRTSAQCSDGITDSPIQKRNRMV 273
F SEE+ALHLD+GG RKRTSAQC D ITDSP KRNRM+
Sbjct: 236 TFISEEMALHLDNGGTRKRTSAQCGDVITDSPTHKRNRMI 275
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 149 PPAP--PPPRTPRTPPKPPTGVTSQAVATESSSSVDVDLQPFQEAIALHGLS-------- 198
PPAP P P P+ P PP G S +S SS D L+ A L LS
Sbjct: 1650 PPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAG 1709
Query: 199 -GAMAGISMRSGDSPQDSGVA 218
G AG + SG D+ VA
Sbjct: 1710 GGGGAGAGVASGPELLDTYVA 1730
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 38.9 bits (89), Expect = 0.005
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 16/80 (20%)
Query: 145 CGKVPPAPPPPRTP----RTPPKPPTGVTSQAVATESSSSVDVDLQPFQEAIALHGLSGA 200
C PP PPPP P TPP PP A + S ++ GL+ A
Sbjct: 181 CSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDES------------SMSGLAAA 228
Query: 201 MAGISMRSGDSPQDSGVASS 220
+AG +R P+D+ SS
Sbjct: 229 IAGAKLRRVQRPEDASGGSS 248
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 38.1 bits (87), Expect = 0.008
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 146 GKVPPAPPPPRTPRTPPKPPTGVTSQAVATE-SSSSVDVDLQPFQEAIALHGLSGAMAGI 204
G PP PPPP + PP PP A+ +S+ D +P L GL+ A+AG
Sbjct: 346 GPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRP------LTGLAAAIAGA 399
Query: 205 SMRSGDSPQDSGVASSG 221
+R +D+ S G
Sbjct: 400 KLRKVSRMEDTSFPSGG 416
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 38.1 bits (87), Expect = 0.008
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 146 GKVPPAPPPPRTPRTPPKPPTGVTSQAVATE-SSSSVDVDLQPFQEAIALHGLSGAMAGI 204
G PP PPPP + PP PP A+ +S+ D +P L GL+ A+AG
Sbjct: 346 GPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRP------LTGLAAAIAGA 399
Query: 205 SMRSGDSPQDSGVASSG 221
+R +D+ S G
Sbjct: 400 KLRKVSRMEDTSFPSGG 416
>gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 36.2 bits (82), Expect = 0.032
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 117 HQRRIKDVLE-WVKKGRSTIRREDLISFLCGKVPPAP---PPPRTPRTPPKP 164
H+ +KD + W+K+ ++ + +F GK+PPAP PPP PP P
Sbjct: 30 HKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPP 81
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 149 PPAPPPPRTPRTPPKPP 165
PP PPPP TPR PP PP
Sbjct: 33 PPPPPPPPTPRPPPPPP 49
Score = 32.3 bits (72), Expect = 0.46
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 149 PPAPPPPRTPRTPPKPPTG 167
PP PP PR P PP PP G
Sbjct: 36 PPPPPTPRPPPPPPLPPPG 54
>gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 36.2 bits (82), Expect = 0.032
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 117 HQRRIKDVLE-WVKKGRSTIRREDLISFLCGKVPPAP---PPPRTPRTPPKP 164
H+ +KD + W+K+ ++ + +F GK+PPAP PPP PP P
Sbjct: 30 HKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPP 81
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 149 PPAPPPPRTPRTPPKPP 165
PP PPPP TPR PP PP
Sbjct: 33 PPPPPPPPTPRPPPPPP 49
Score = 32.3 bits (72), Expect = 0.46
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 149 PPAPPPPRTPRTPPKPPTG 167
PP PP PR P PP PP G
Sbjct: 36 PPPPPTPRPPPPPPLPPPG 54
>gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 36.2 bits (82), Expect = 0.032
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 117 HQRRIKDVLE-WVKKGRSTIRREDLISFLCGKVPPAP---PPPRTPRTPPKP 164
H+ +KD + W+K+ ++ + +F GK+PPAP PPP PP P
Sbjct: 30 HKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPP 81
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 149 PPAPPPPRTPRTPPKPP 165
PP PPPP TPR PP PP
Sbjct: 33 PPPPPPPPTPRPPPPPP 49
Score = 32.3 bits (72), Expect = 0.46
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 149 PPAPPPPRTPRTPPKPPTG 167
PP PP PR P PP PP G
Sbjct: 36 PPPPPTPRPPPPPPLPPPG 54
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.8 bits (81), Expect = 0.041
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 149 PPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDLQPFQEAIALHGLSGAM 201
PP PPPP P P PP ++ A+ + + P Q ++ L LS M
Sbjct: 2040 PPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSVPLTQLSMPM 2092
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 35.8 bits (81), Expect = 0.041
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 149 PPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
PP PPPP P PP PP + SQ+ + S++
Sbjct: 630 PPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAA 661
Score = 31.6 bits (70), Expect = 0.78
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 148 VPPAPPPPRTPRTPPKPP 165
+PP PPPP P PP PP
Sbjct: 628 LPPPPPPPPPPPPPPPPP 645
Score = 31.2 bits (69), Expect = 1.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 149 PPAPPPPRTPRTPPKPP 165
PP PPPP P PP PP
Sbjct: 626 PPLPPPPPPPPPPPPPP 642
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 35.4 bits (80), Expect = 0.054
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 128 VKKGRSTIRR-EDLISFLCGKVPPAPP-PPRTPRTPPKPP 165
++KG+ R + + F CG P PP PPR P PPKPP
Sbjct: 1 MEKGKQRDRSYSNFVFFPCGLWSPPPPLPPRKPPRPPKPP 40
Score = 29.6 bits (65), Expect = 3.0
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 34/125 (27%)
Query: 149 PPAPPP--PRTPRTPPKP---------------------PTGVTSQAVATESSSSVDVDL 185
PP PPP P+ P PP+P P+ + S A SS
Sbjct: 50 PPLPPPRPPKPPLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKP 109
Query: 186 QPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTS--------FLEDDLNPFDS 237
P ++ ++ S + + S DS S V SS R T+ L D L P +S
Sbjct: 110 NPLEDPVS---RSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNS 166
Query: 238 EELAL 242
+AL
Sbjct: 167 SLIAL 171
Score = 28.9 bits (63), Expect = 5.0
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Query: 148 VPPAPP-PPRTPRTPPKPP 165
+PP PP PP P PPKPP
Sbjct: 43 LPPNPPRPPLPPPRPPKPP 61
Score = 28.5 bits (62), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
Query: 149 PPAPP------PPRTPRTPPKPP 165
PP PP PPR P PP+PP
Sbjct: 36 PPKPPRPLPPNPPRPPLPPPRPP 58
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 35.4 bits (80), Expect = 0.054
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 128 VKKGRSTIRR-EDLISFLCGKVPPAPP-PPRTPRTPPKPP 165
++KG+ R + + F CG P PP PPR P PPKPP
Sbjct: 1 MEKGKQRDRSYSNFVFFPCGLWSPPPPLPPRKPPRPPKPP 40
Score = 29.6 bits (65), Expect = 3.0
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 34/125 (27%)
Query: 149 PPAPPP--PRTPRTPPKP---------------------PTGVTSQAVATESSSSVDVDL 185
PP PPP P+ P PP+P P+ + S A SS
Sbjct: 50 PPLPPPRPPKPPLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKP 109
Query: 186 QPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTS--------FLEDDLNPFDS 237
P ++ ++ S + + S DS S V SS R T+ L D L P +S
Sbjct: 110 NPLEDPVS---RSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNS 166
Query: 238 EELAL 242
+AL
Sbjct: 167 SLIAL 171
Score = 28.9 bits (63), Expect = 5.0
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Query: 148 VPPAPP-PPRTPRTPPKPP 165
+PP PP PP P PPKPP
Sbjct: 43 LPPNPPRPPLPPPRPPKPP 61
Score = 28.5 bits (62), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
Query: 149 PPAPP------PPRTPRTPPKPP 165
PP PP PPR P PP+PP
Sbjct: 36 PPKPPRPLPPNPPRPPLPPPRPP 58
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 35.4 bits (80), Expect = 0.054
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 128 VKKGRSTIRR-EDLISFLCGKVPPAPP-PPRTPRTPPKPP 165
++KG+ R + + F CG P PP PPR P PPKPP
Sbjct: 1 MEKGKQRDRSYSNFVFFPCGLWSPPPPLPPRKPPRPPKPP 40
Score = 29.6 bits (65), Expect = 3.0
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 34/125 (27%)
Query: 149 PPAPPP--PRTPRTPPKP---------------------PTGVTSQAVATESSSSVDVDL 185
PP PPP P+ P PP+P P+ + S A SS
Sbjct: 50 PPLPPPRPPKPPLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKP 109
Query: 186 QPFQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTS--------FLEDDLNPFDS 237
P ++ ++ S + + S DS S V SS R T+ L D L P +S
Sbjct: 110 NPLEDPVS---RSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNS 166
Query: 238 EELAL 242
+AL
Sbjct: 167 SLIAL 171
Score = 28.9 bits (63), Expect = 5.0
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Query: 148 VPPAPP-PPRTPRTPPKPP 165
+PP PP PP P PPKPP
Sbjct: 43 LPPNPPRPPLPPPRPPKPP 61
Score = 28.5 bits (62), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
Query: 149 PPAPP------PPRTPRTPPKPP 165
PP PP PPR P PP+PP
Sbjct: 36 PPKPPRPLPPNPPRPPLPPPRPP 58
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.0 bits (79), Expect = 0.070
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 13 AEHWFSKWERQCLAEAEQEEQLPPELQEEAAAELAGLKSEKQKLWHL 59
+EHW + E + LA +++EQL +LQE + A LK ++K HL
Sbjct: 1155 SEHWKPELEEKILALEKEKEQLQKKLQEALTSRKAILKKAQEKERHL 1201
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 35.0 bits (79), Expect = 0.070
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 12/111 (10%)
Query: 128 VKKGRSTIRREDLISFLCGKVPPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDLQP 187
+++ RS R ED G P PPPP P PP P + + + S P
Sbjct: 63 LQRPRSQKRAED------GPALPPPPPPPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSP 116
Query: 188 FQEAIALHGLSGAMAGISMRSGDSPQDSGVASSGRRKTSFLEDDLNPFDSE 238
A+ G+ G+ + ++G + R +T++ L + E
Sbjct: 117 AASAVPASGVGSPADGLGL------PEAGGGGARRLRTAYTNTQLLELEKE 161
>gi|239754630 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 143 FLCGKV-PPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDL---------QPFQEAI 192
FL GKV PP P P R P K T V + A A S ++ V +P +E +
Sbjct: 69 FLPGKVIPPFPSPTRPPTHGKKIKTAVVASACAASSPGALIVAFAAIVVLLVARPEREVV 128
Query: 193 A--LHGLSGAMAGI---SMRSGDSPQDSGVASSGRRKTSFL 228
A LH G + G+ ++ GD + G+ + FL
Sbjct: 129 AEELHDERGVLVGVLVEGVKLGDGVVERGLLGGLHHRRPFL 169
>gi|239749175 PREDICTED: hypothetical protein XP_002346935 [Homo
sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 143 FLCGKV-PPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDL---------QPFQEAI 192
FL GKV PP P P R P K T V + A A S ++ V +P +E +
Sbjct: 69 FLPGKVIPPFPSPTRPPTHGKKIKTAVVASACAASSPGALIVAFAAIVVLLVARPEREVV 128
Query: 193 A--LHGLSGAMAGI---SMRSGDSPQDSGVASSGRRKTSFL 228
A LH G + G+ ++ GD + G+ + FL
Sbjct: 129 AEELHDERGVLVGVLVEGVKLGDGVVERGLLGGLHHRRPFL 169
>gi|239743250 PREDICTED: hypothetical protein XP_002342811 [Homo
sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 143 FLCGKV-PPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDL---------QPFQEAI 192
FL GKV PP P P R P K T V + A A S ++ V +P +E +
Sbjct: 69 FLPGKVIPPFPSPTRPPTHGKKIKTAVVASACAASSPGALIVAFAAIVVLLVARPEREVV 128
Query: 193 A--LHGLSGAMAGI---SMRSGDSPQDSGVASSGRRKTSFL 228
A LH G + G+ ++ GD + G+ + FL
Sbjct: 129 AEELHDERGVLVGVLVEGVKLGDGVVERGLLGGLHHRRPFL 169
>gi|239508925 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 143 FLCGKV-PPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDL---------QPFQEAI 192
FL GKV PP P P R P K T V + A A S ++ V +P +E +
Sbjct: 69 FLPGKVIPPFPSPTRPPTHGKKIKTAVVASACAASSPGALIVAFAAIVVLLVARPEREVV 128
Query: 193 A--LHGLSGAMAGI---SMRSGDSPQDSGVASSGRRKTSFL 228
A LH G + G+ ++ GD + G+ + FL
Sbjct: 129 AEELHDERGVLVGVLVEGVKLGDGVVERGLLGGLHHRRPFL 169
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 149 PPAPPPPRTPRTPPKPPTGVTS---QAVATESSSSVDVDLQPFQEAIALHGLSGAMAGIS 205
PP PPPP +P PP PP Q V E S + +E L + S
Sbjct: 713 PPPPPPPESPPPPPPPPPPAEDGEIQEVEMEDEGSEEPPAPGTEEDTPLKPSAQTTVVTS 772
Query: 206 MRSGDSPQDSGVASSGRRK 224
S DS S ++ G ++
Sbjct: 773 QSSVDSTISSSSSTKGIKR 791
Score = 29.3 bits (64), Expect = 3.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 149 PPAPPPPRTPRTPPKPPTGVTSQAVATESSSS 180
PP PPPP P P PP T + ++ S
Sbjct: 908 PPPPPPPPPPPAPKMPPPEKTKKGRKDKAKKS 939
Score = 28.5 bits (62), Expect = 6.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 149 PPAPPPPRTPRTPPKP 164
PP PPPP P PP P
Sbjct: 905 PPPPPPPPPPPPPPAP 920
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 34.3 bits (77), Expect = 0.12
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 146 GKVPPAPPPPRTPRTPPKPPTGVTSQ 171
G PP PPPP P PP P TG Q
Sbjct: 388 GGAPPPPPPPPPPGPPPPPFTGADGQ 413
Score = 30.8 bits (68), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 149 PPAPPPPRTPR---TPPKPPTGVTS 170
PPAPPPP P PP PP G S
Sbjct: 319 PPAPPPPPPPMIGIPPPPPPVGFGS 343
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 148 VPPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDLQPFQEAIALHGLSGAMAGISMR 207
+PP PP P P+ PP PP+ V S+S++ A++ S +S++
Sbjct: 551 LPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPPSTHSKTSAVSSQANSQPPVQVSVK 610
Query: 208 SGDSPQDSGVASSGRRKTSFLED-DLNPF-----DSEELALHLDSGGIRKRTSAQCSDGI 261
+ Q S A+ KTS L L P D + L S ++K + +
Sbjct: 611 T----QVSVTAAIPHLKTSTLPPLPLPPLLPGDDDMDSPKETLPSKPVKKEKEQRTRHLL 666
Query: 262 TDSPI 266
TD P+
Sbjct: 667 TDLPL 671
Score = 28.9 bits (63), Expect = 5.0
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
Query: 149 PPAP---PPPRTPRTPPKPP 165
PP P PPP+TP PP PP
Sbjct: 537 PPLPTTTPPPQTPPLPPLPP 556
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 148 VPPAPPPPRTPRTPPKPPTGVTSQAVATESSSSVDVDLQPFQEAIALHGLSGAMAGISMR 207
+PP PP P P+ PP PP+ V S+S++ A++ S +S++
Sbjct: 551 LPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPPSTHSKTSAVSSQANSQPPVQVSVK 610
Query: 208 SGDSPQDSGVASSGRRKTSFLED-DLNPF-----DSEELALHLDSGGIRKRTSAQCSDGI 261
+ Q S A+ KTS L L P D + L S ++K + +
Sbjct: 611 T----QVSVTAAIPHLKTSTLPPLPLPPLLPGDDDMDSPKETLPSKPVKKEKEQRTRHLL 666
Query: 262 TDSPI 266
TD P+
Sbjct: 667 TDLPL 671
Score = 28.9 bits (63), Expect = 5.0
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
Query: 149 PPAP---PPPRTPRTPPKPP 165
PP P PPP+TP PP PP
Sbjct: 537 PPLPTTTPPPQTPPLPPLPP 556
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 34.3 bits (77), Expect = 0.12
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 145 CGKVPPAPPPPRTPRTPPKPPTGVTS 170
C PP PPPP TP PP PP V S
Sbjct: 221 CAPPPPPPPPPPTP--PPLPPASVLS 244
Score = 33.5 bits (75), Expect = 0.20
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 148 VPPAPPPPRTPRTPP---KPPTGVTSQAVATESSS 179
VPP PPPP P PP PP ++ V+T++SS
Sbjct: 3 VPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSS 37
Score = 28.5 bits (62), Expect = 6.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 149 PPAPPPPRTPRTPPKP 164
PP PPPP P PP P
Sbjct: 176 PPTPPPPPPPLPPPLP 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,091,769
Number of Sequences: 37866
Number of extensions: 613344
Number of successful extensions: 10690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 7228
Number of HSP's gapped (non-prelim): 2789
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.