Search of human proteins with 40385883

Search of human proteins with 40385883

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40385883 ribulose-5-phosphate-3-epimerase isoform 1 [Homo
sapiens]
         (228 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40385883 ribulose-5-phosphate-3-epimerase isoform 1 [Homo sap...   467   e-132
gi|219879828 rcRPE protein [Homo sapiens]                             448   e-126
gi|24307923 ribulose-5-phosphate-3-epimerase isoform 2 [Homo sap...   316   1e-86
gi|61744483 solute carrier family 3, member 2 isoform f [Homo sa...    30   2.2  
gi|61744481 solute carrier family 3, member 2 isoform e [Homo sa...    30   2.2  
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa...    30   2.2  
gi|65506891 solute carrier family 3, member 2 isoform c [Homo sa...    30   2.2  
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa...    30   2.2  
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa...    30   2.2  
gi|155030240 tRNA nucleotidyl transferase, CCA-adding, 1 [Homo s...    29   3.8  
gi|4503273 angiotensin I converting enzyme 1 isoform 1 precursor...    29   3.8  
gi|23238214 angiotensin I converting enzyme 1 isoform 2 precurso...    29   3.8  
gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...    29   3.8  
gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [...    28   6.5  
gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...    28   6.5  
gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...    28   6.5  
gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...    28   6.5  
gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...    28   6.5  
gi|45269149 quinolinate phosphoribosyltransferase [Homo sapiens]       28   8.5  

>gi|40385883 ribulose-5-phosphate-3-epimerase isoform 1 [Homo
           sapiens]
          Length = 228

 Score =  467 bits (1201), Expect = e-132
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
           MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ
Sbjct: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60

Query: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
           LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK
Sbjct: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120

Query: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
           PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180

Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
           DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR
Sbjct: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228


>gi|219879828 rcRPE protein [Homo sapiens]
          Length = 228

 Score =  448 bits (1152), Expect = e-126
 Identities = 219/228 (96%), Positives = 222/228 (97%)

Query: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
           MASGCKIGPSILNSDLANLGA+CL+MLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ
Sbjct: 1   MASGCKIGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60

Query: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
           LGQDPFFDMHMMVSKPEQWVKPMAVA ANQYTFHLEATENPG LIKDIRENGMKVGLAIK
Sbjct: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIK 120

Query: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
           PGTSVEYLAPWANQIDMALVMTVEPGFG QKFMEDMMPKVHWLRTQFPSLDIE DGGVG 
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQFPSLDIEGDGGVGS 180

Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
           DTVHKCAEAGANM VSGSAIMRSEDPRSVINLLRN+CSEAAQKRSLDR
Sbjct: 181 DTVHKCAEAGANMTVSGSAIMRSEDPRSVINLLRNICSEAAQKRSLDR 228


>gi|24307923 ribulose-5-phosphate-3-epimerase isoform 2 [Homo
           sapiens]
          Length = 178

 Score =  316 bits (809), Expect = 1e-86
 Identities = 160/178 (89%), Positives = 160/178 (89%), Gaps = 18/178 (10%)

Query: 69  MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK-------------- 114
           MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK              
Sbjct: 1   MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQ 60

Query: 115 ----VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSL 170
               VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSL
Sbjct: 61  GPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSL 120

Query: 171 DIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
           DIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR
Sbjct: 121 DIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 178


>gi|61744483 solute carrier family 3, member 2 isoform f [Homo
           sapiens]
          Length = 529

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 386 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 426

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 427 DQRSKERSL 435


>gi|61744481 solute carrier family 3, member 2 isoform e [Homo
           sapiens]
          Length = 568

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 425 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 465

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 466 DQRSKERSL 474


>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
           sapiens]
          Length = 599

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 456 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 496

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 497 DQRSKERSL 505


>gi|65506891 solute carrier family 3, member 2 isoform c [Homo
           sapiens]
          Length = 630

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 487 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 527

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 528 DQRSKERSL 536


>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
           sapiens]
          Length = 631

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 488 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 528

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 529 DQRSKERSL 537


>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
           sapiens]
          Length = 661

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 19/69 (27%)

Query: 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
           P + W  + FP    ++ G V            ANM V G    +SEDP S+++L R + 
Sbjct: 518 PVMLWDESSFP----DIPGAVS-----------ANMTVKG----QSEDPGSLLSLFRRLS 558

Query: 218 SEAAQKRSL 226
            + +++RSL
Sbjct: 559 DQRSKERSL 567


>gi|155030240 tRNA nucleotidyl transferase, CCA-adding, 1 [Homo
           sapiens]
          Length = 434

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 70  HMMVSKPEQW-VKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 128
           H ++ + +QW + P  V+G +     + + +  GAL++ +RE   K G  ++    + Y+
Sbjct: 372 HCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQLREQWKKSGYQMEKDELLSYI 431


>gi|4503273 angiotensin I converting enzyme 1 isoform 1 precursor
            [Homo sapiens]
          Length = 1306

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 14/84 (16%)

Query: 90   QYTFH---LEATENPGALIK-DI---RENGMKVGLAIKPGTSVEYLAPWANQIDMALVMT 142
            Q+ FH    +A  + G L K DI   +E G ++  A+K G S     PW   + +   +T
Sbjct: 1135 QFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMKLGFS----RPWPEAMQL---IT 1187

Query: 143  VEPGFGGQKFMEDMMPKVHWLRTQ 166
             +P       +    P + WLRT+
Sbjct: 1188 GQPNMSASAMLSYFKPLLDWLRTE 1211


>gi|23238214 angiotensin I converting enzyme 1 isoform 2 precursor
           [Homo sapiens]
          Length = 732

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 14/84 (16%)

Query: 90  QYTFH---LEATENPGALIK-DI---RENGMKVGLAIKPGTSVEYLAPWANQIDMALVMT 142
           Q+ FH    +A  + G L K DI   +E G ++  A+K G S     PW   + +   +T
Sbjct: 561 QFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMKLGFS----RPWPEAMQL---IT 613

Query: 143 VEPGFGGQKFMEDMMPKVHWLRTQ 166
            +P       +    P + WLRT+
Sbjct: 614 GQPNMSASAMLSYFKPLLDWLRTE 637


>gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2
           [Homo sapiens]
          Length = 607

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 26/138 (18%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLRKQLGQDPFFDMHMM 72
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR      P  +   M
Sbjct: 342 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNL--AIPVINKAKM 399

Query: 73  VSKPEQWVKPMAVAGANQYTFHLEATENPGALIK---------DIRENGMKVGLAIKPGT 123
           +S           AG  +       +E P    K         D +E   ++G  +K   
Sbjct: 400 LS-----------AGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQEAAEQLGKNVK--- 445

Query: 124 SVEYLAPWANQIDMALVM 141
            VE L  W    D A VM
Sbjct: 446 LVERLVEWCEAKDHAGVM 463


>gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6
           [Homo sapiens]
          Length = 516

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR
Sbjct: 250 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 295


>gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5
           [Homo sapiens]
          Length = 558

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR
Sbjct: 292 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 337


>gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
           [Homo sapiens]
          Length = 559

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR
Sbjct: 293 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 338


>gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3
           [Homo sapiens]
          Length = 607

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR
Sbjct: 341 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 386


>gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1
           [Homo sapiens]
          Length = 608

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 14  SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
           ++ A   A C+ M+D+G     +D++D H    N+T  H  + +LR
Sbjct: 342 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 387


>gi|45269149 quinolinate phosphoribosyltransferase [Homo sapiens]
          Length = 297

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 154 EDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
           E++ P    L+ QFPS+ +E  GG+  D +
Sbjct: 227 EELHPTATVLKAQFPSVAVEASGGITLDNL 256


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,844,199
Number of Sequences: 37866
Number of extensions: 383226
Number of successful extensions: 672
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 19
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.