Guide to the Human Genome
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Name: FUCA2 Sequence: fasta or formatted (467aa) NCBI GI: 40068512
Description:

fucosidase, alpha-L- 2, plasma

Referenced in:

Protein Glycosylation
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         23           1
 C cysteine            1.3          6           1
 D aspartate           4.3         20           1
 E glutamate           6.6         31           2
 F phenylalanine       5.8         27           2
 G glycine             7.3         34           2
 H histidine           2.8         13           2
 I isoleucine          4.5         21           1
 K lysine              5.4         25           1
 L leucine            11.1         52           9
 M methionine          1.5          7           1
 N asparagine          4.3         20           2
 P proline             6.9         32           4
 Q glutamine           3.6         17           1
 R arginine            3.6         17           2
 S serine              6.2         29           3
 T threonine           5.4         25           1
 V valine              5.1         24           2
 W tryptophan          5.4         25           2
 Y tyrosine            4.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fucosidase, alpha-L- 2, plasma 
FUCA1                 0.533   fucosidase, alpha-L-1, tissue 
ASTN2                 0.007   astrotactin 2 isoform c 
ASTN2                 0.007   astrotactin 2 isoform b 
ASTN2                 0.007   astrotactin 2 isoform a 
ITGA5                 0.006   integrin alpha 5 precursor 
ADAMTS2               0.006   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.006   ADAM metallopeptidase with thrombospondin type 1 mo...
SLC16A8               0.006   solute carrier family 16, member 8 
SEMA4B                0.005   semaphorin 4B precursor 
SEMA4B                0.005   semaphorin 4B precursor 
KAZALD1               0.005   Kazal-type serine peptidase inhibitor domain 1 precu...
CELSR2                0.005   cadherin EGF LAG seven-pass G-type receptor 2 
GFRA3                 0.005   GDNF family receptor alpha 3 preproprotein 
GUCY2D                0.005   guanylate cyclase 2D, membrane (retina-specific) [Hom...
F8A1                  0.005   coagulation factor VIII-associated protein 
F8A3                  0.005   coagulation factor VIII-associated (intronic transcr...
F8A2                  0.005   coagulation factor VIII-associated (intronic transcr...
CNPY3                 0.004   trinucleotide repeat containing 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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