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Search of human proteins with 38569423
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
(1091 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens] 2199 0.0
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens] 2191 0.0
gi|109452591 succinate-CoA ligase, GDP-forming alpha subunit [Ho... 87 1e-16
gi|157779135 succinate-CoA ligase, GDP-forming beta subunit prec... 54 1e-06
gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit prec... 50 1e-05
gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens] 35 0.30
gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo sa... 35 0.30
gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens] 35 0.30
gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens] 35 0.30
gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens] 35 0.30
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens] 32 3.3
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ... 32 3.3
gi|38261969 APG12 autophagy 12-like [Homo sapiens] 32 3.3
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 32 3.3
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 32 3.3
gi|122937249 glutamate receptor interacting protein 2 [Homo sapi... 32 4.3
gi|161019170 mucin 5AC [Homo sapiens] 31 5.6
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 31 7.3
gi|87298843 ethanolamine kinase 1 isoform B [Homo sapiens] 31 7.3
gi|10092615 ethanolamine kinase 1 isoform A [Homo sapiens] 31 7.3
gi|19924103 synapsin II isoform IIa [Homo sapiens] 30 9.5
gi|10835091 bone morphogenetic protein 5 preproprotein [Homo sap... 30 9.5
gi|24797103 RAS guanyl releasing protein 2 [Homo sapiens] 30 9.5
gi|149158729 RAS guanyl releasing protein 2 [Homo sapiens] 30 9.5
gi|149158727 RAS guanyl releasing protein 2 [Homo sapiens] 30 9.5
>gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
Length = 1091
Score = 2199 bits (5698), Expect = 0.0
Identities = 1091/1091 (100%), Positives = 1091/1091 (100%)
Query: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
Query: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
Query: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA 360
LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA 360
Query: 361 IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG 420
IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG
Sbjct: 361 IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG 420
Query: 421 HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKST 480
HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKST
Sbjct: 421 HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKST 480
Query: 481 TLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILI 540
TLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILI
Sbjct: 481 TLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILI 540
Query: 541 PVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLI 600
PVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLI
Sbjct: 541 PVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLI 600
Query: 601 KKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNEL 660
KKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNEL
Sbjct: 601 KKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNEL 660
Query: 661 NNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRG 720
NNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRG
Sbjct: 661 NNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRG 720
Query: 721 IKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF 780
IKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF
Sbjct: 721 IKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF 780
Query: 781 DELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQ 840
DELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQ
Sbjct: 781 DELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQ 840
Query: 841 ELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAHNT 900
ELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAHNT
Sbjct: 841 ELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAHNT 900
Query: 901 IICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLI 960
IICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLI
Sbjct: 901 IICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLI 960
Query: 961 MGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIG 1020
MGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIG
Sbjct: 961 MGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIG 1020
Query: 1021 VAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDD 1080
VAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDD
Sbjct: 1021 VAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDD 1080
Query: 1081 ISYVLPEHMSM 1091
ISYVLPEHMSM
Sbjct: 1081 ISYVLPEHMSM 1091
>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
Length = 1101
Score = 2191 bits (5677), Expect = 0.0
Identities = 1091/1101 (99%), Positives = 1091/1101 (99%), Gaps = 10/1101 (0%)
Query: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
Query: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
Query: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA 360
LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA 360
Query: 361 IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG 420
IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG
Sbjct: 361 IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG 420
Query: 421 HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQ---- 476
HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQ
Sbjct: 421 HRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVP 480
Query: 477 ------GKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK 530
GKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK
Sbjct: 481 SPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK 540
Query: 531 FYWGHKEILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG 590
FYWGHKEILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG
Sbjct: 541 FYWGHKEILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG 600
Query: 591 IPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYV 650
IPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYV
Sbjct: 601 IPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYV 660
Query: 651 SRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIG 710
SRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIG
Sbjct: 661 SRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIG 720
Query: 711 GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALK 770
GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALK
Sbjct: 721 GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALK 780
Query: 771 EAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASF 830
EAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASF
Sbjct: 781 EAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASF 840
Query: 831 MTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADH 890
MTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADH
Sbjct: 841 MTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADH 900
Query: 891 GPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFV 950
GPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFV
Sbjct: 901 GPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFV 960
Query: 951 NKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPN 1010
NKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPN
Sbjct: 961 NKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPN 1020
Query: 1011 LILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLK 1070
LILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLK
Sbjct: 1021 LILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLK 1080
Query: 1071 QGLYRHPWDDISYVLPEHMSM 1091
QGLYRHPWDDISYVLPEHMSM
Sbjct: 1081 QGLYRHPWDDISYVLPEHMSM 1101
>gi|109452591 succinate-CoA ligase, GDP-forming alpha subunit [Homo
sapiens]
Length = 346
Score = 86.7 bits (213), Expect = 1e-16
Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 534 GHKEILIPVFKNMADAMRKHPEVDVLIN----FASLRSAYDSTMETMNYAQIRTIAIIAE 589
G + +PVF + +A + +I FA+ +A + +E A+I + I E
Sbjct: 92 GQTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAA--AAINEAIE----AEIPLVVCITE 145
Query: 590 GIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVA 648
GIP+ + R K Q+ +IGP G I PG KIG I+ +++ G +
Sbjct: 146 GIPQQDMVRVKHKLLRQEKTRLIGPNCPGVINPGECKIG--------IMPGHIHKKGRIG 197
Query: 649 YVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGE 708
VSRSG ++ E + ++ G V IGGD + G+ F+D + + + + I+++GE
Sbjct: 198 IVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFIDCLEIFLNDSATEGIILIGE 257
Query: 709 IGGTEEYKICRGIKE---GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAK 765
IGG E +K+ G +KP+V + G A + GHAGA A K
Sbjct: 258 IGGNAEENAAEFLKQHNSGPNSKPVVSFIAGLTA---PPGRRMGHAGAIIAGGKGGAKEK 314
Query: 766 NQALKEAGVFVPRSFDELGEIIQSVYE 792
AL+ AGV V S +LG I +E
Sbjct: 315 ISALQSAGVVVSMSPAQLGTTIYKEFE 341
>gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
precursor [Homo sapiens]
Length = 432
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 43/297 (14%)
Query: 116 AEEFYVCIYATRE--GDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNP-EDIKKHLLVH 172
+ E Y+ I R G ++ +GGVD+ +V A +L+ E+++ E IK
Sbjct: 149 SRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIF--KEQIDIFEGIKDSQAQR 206
Query: 173 APEDK------KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATA 225
E+ K A I+ L+N + + T +E+NP T +G V D D A
Sbjct: 207 MAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNA 266
Query: 226 DYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGAS 285
++ K DI F E P E A D K + G I V G G +
Sbjct: 267 EFRQK----DI-FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLA 313
Query: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIA 345
+ D I GG + AN+ + G E Q Y K L+T + + ++ I G I
Sbjct: 314 MATCDIIFLNGG--KPANFLDLGGGVKEAQVYQAFK----LLTADPKVEAILVNIFGGIV 367
Query: 346 NFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPI 402
N +A GI +A R+ E +V + VR G N QE +++ +G+PI
Sbjct: 368 NCAIIA---NGITKACREL-----ELKVPLVVRLEGTNVQEAQKIL----NNSGLPI 412
>gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
precursor [Homo sapiens]
Length = 463
Score = 50.1 bits (118), Expect = 1e-05
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 118 EFYVCIYATR--EGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHA-- 173
E+Y I R +G ++ GGV++ DV A++ + ++ + E IKK +
Sbjct: 166 EYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIE-EGIKKEQALQLAQ 224
Query: 174 ----PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYIC 229
P + E A + L++ + T +EINP+V DG VL + AK++ ++
Sbjct: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGA-VLCMDAKINFDSNSAY 283
Query: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289
+ K F + + +E D K A L + G I +V G G ++
Sbjct: 284 RQK-------KIFDLQDWTQE----DERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATM 332
Query: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349
D I GG AN+ + G + Q + K L+T +K ++ I G I
Sbjct: 333 DIIKLHGGTP--ANFLDVGGGATVHQVTEAFK----LITSDKKVLAILVNIFGGIMRCDV 386
Query: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395
+A +GIV A++D E ++ + VR G + ++ + G
Sbjct: 387 IA---QGIVMAVKDL-----EIKIPVVVRLQGTRVDDAKALIADSG 424
>gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
Length = 536
Score = 35.4 bits (80), Expect = 0.30
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 323 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 378
Query: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
F E P E A D K + G I V G G ++ D I G
Sbjct: 379 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 429
Query: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 430 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 480
Query: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
I +A ++ E +V + V G N QE ++
Sbjct: 481 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 510
>gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo
sapiens]
Length = 543
Score = 35.4 bits (80), Expect = 0.30
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 330 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 385
Query: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
F E P E A D K + G I V G G ++ D I G
Sbjct: 386 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 436
Query: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 437 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 487
Query: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
I +A ++ E +V + V G N QE ++
Sbjct: 488 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 517
>gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]
Length = 543
Score = 35.4 bits (80), Expect = 0.30
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 330 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 385
Query: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
F E P E A D K + G I V G G ++ D I G
Sbjct: 386 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 436
Query: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 437 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 487
Query: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
I +A ++ E +V + V G N QE ++
Sbjct: 488 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 517
>gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens]
Length = 713
Score = 35.4 bits (80), Expect = 0.30
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 644 PGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGST 686
PGS + SG S + N+I +T +GVAIGG +PG T
Sbjct: 140 PGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPGQT 182
>gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens]
Length = 781
Score = 35.4 bits (80), Expect = 0.30
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 644 PGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGST 686
PGS + SG S + N+I +T +GVAIGG +PG T
Sbjct: 208 PGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPGQT 250
>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
Length = 626
Score = 32.0 bits (71), Expect = 3.3
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 33/140 (23%)
Query: 885 MVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGI 944
++T++H + + A+NT+I + +D V S+ + T+ LDA S
Sbjct: 250 ILTSNHRNSWAKAYNTLIKDKVNRDSVRSIQKSIFTV------CLDATMPRVS------- 296
Query: 945 IPMEFVNKMKKEGKLIMGIGHRVKSIN---NPDMRVQILKD----YVRQHF-----PATP 992
E V + G+++ G G R+ S N + ++ + +D V +H P
Sbjct: 297 ---EDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGPPIVT 353
Query: 993 LLDYALEVEKITTSKKPNLI 1012
LLDY +E +KKP L+
Sbjct: 354 LLDYVIEY-----TKKPELV 368
>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
Length = 347
Score = 32.0 bits (71), Expect = 3.3
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 419 LGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMP 475
+G +P+P Q + A A+ S + PA A E VAP A+PA+P
Sbjct: 192 VGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARPALP 248
>gi|38261969 APG12 autophagy 12-like [Homo sapiens]
Length = 187
Score = 32.0 bits (71), Expect = 3.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 428 PPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKSTTLFSRHT 487
P + A L + S T+TP P +A+ S + KK + + T +
Sbjct: 59 PTSIAAGGEGLTDVSPETTTPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTK 118
Query: 488 KAIVWGMQ-TRAVQGMLDF 505
K W ++ TR +QG++DF
Sbjct: 119 K---WAVERTRTIQGLIDF 134
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 32.0 bits (71), Expect = 3.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 412 TAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPA---- 467
T+ + + G + P Q P + HT+ L G + +P S AS ++SR+ ++PA
Sbjct: 663 TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGS-PASVAQSRSGPLSPAAVPG 721
Query: 468 KKAKPAMPQGKSTTL 482
+ P P G+S ++
Sbjct: 722 NQMPPRPPSGQSDSI 736
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 32.0 bits (71), Expect = 3.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 412 TAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPA---- 467
T+ + + G + P Q P + HT+ L G + +P S AS ++SR+ ++PA
Sbjct: 663 TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGS-PASVAQSRSGPLSPAAVPG 721
Query: 468 KKAKPAMPQGKSTTL 482
+ P P G+S ++
Sbjct: 722 NQMPPRPPSGQSDSI 736
>gi|122937249 glutamate receptor interacting protein 2 [Homo
sapiens]
Length = 1141
Score = 31.6 bits (70), Expect = 4.3
Identities = 62/271 (22%), Positives = 102/271 (37%), Gaps = 47/271 (17%)
Query: 244 REAYPEE---AYIADLDAKSGASLKLTLL-----NPKGRIWTMVAGGGASVVYSDTICDL 295
R++ PEE + +L K G++L LT+ + K R+ + GG L
Sbjct: 133 RQSIPEEFRGITVVELIKKEGSTLGLTISGGTDKDGKPRVSNLRPGG------------L 180
Query: 296 GGVNELANYGEY----SGAPSEQQTYDYAKTILSLMTRE-----------KHPDGKILII 340
++L N G+Y +G + +D T+L + P+ II
Sbjct: 181 AARSDLLNIGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPAPENNPRII 240
Query: 341 GGSI-ANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG-LRVMGEVGKTT 398
++ + +F ++R G V +VR GGP +EG L+V +
Sbjct: 241 SKTVDVSLYKEGNSFGFVLRGGAHEDGHKSRPLVLTYVRPGGPADREGSLKVGDRLLSVD 300
Query: 399 GIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGS-----TSTPAPSRT 453
GIP+H +H TA+ + Q T + + NASG TP +
Sbjct: 301 GIPLH---GASHATALATLRQCSHEALFQVEYDVATPDTVANASGPLMVEIVKTPGSALG 357
Query: 454 ASFSES--RADEVAPAKKAKPAMPQGKSTTL 482
S + + R V + KPA +S L
Sbjct: 358 ISLTTTSLRNKSVITIDRIKPASVVDRSGAL 388
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 31.2 bits (69), Expect = 5.6
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 420 GHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKS 479
G P+ P HTA L + + +T + + +S +++ P A G+S
Sbjct: 3927 GSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRS 3986
Query: 480 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYP 522
S HT W T A G+L ++ EPS P
Sbjct: 3987 LPPSSPHTVRTAW---TSATSGILGTTHI---TEPSTVTSHTP 4023
Score = 30.8 bits (68), Expect = 7.3
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 395 GKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTA 454
G +P+ + T T T G P+ P HT L + + +T + + +
Sbjct: 3263 GTARTLPVWISTTTTPTTR------GSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPS 3316
Query: 455 SFSESRADEVAPAKKAKPAMPQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEP 514
S +++ P A G+S + S HT W T A G L ++ EP
Sbjct: 3317 SSTQTSGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAW---TSATSGTLGTTHI---TEP 3370
Query: 515 SVAAMVYP 522
S P
Sbjct: 3371 STGTSHTP 3378
Score = 30.4 bits (67), Expect = 9.5
Identities = 19/82 (23%), Positives = 31/82 (37%)
Query: 420 GHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQGKS 479
G P+ P HTA L + + +T + + +S +++ P A G+S
Sbjct: 2780 GSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTMATTHGRS 2839
Query: 480 TTLFSRHTKAIVWGMQTRAVQG 501
S HT W T + G
Sbjct: 2840 LPPSSPHTVRTAWTSATSGILG 2861
Score = 30.4 bits (67), Expect = 9.5
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 12/122 (9%)
Query: 401 PIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESR 460
P+ + T T T+ G P+ P HT L + + +T + + +S +++
Sbjct: 4416 PVWISTTTTPTTS------GSTVTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTS 4469
Query: 461 ADEVAPAKKAKPAMPQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMV 520
P A G+S + S HT W T A G L ++ EPS
Sbjct: 4470 GTTHTPPVPNTTATTHGRSLSPSSPHTVRTAW---TSATSGTLGTTHI---TEPSTGTSH 4523
Query: 521 YP 522
P
Sbjct: 4524 TP 4525
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 30.8 bits (68), Expect = 7.3
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 993 LLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNG 1049
+++ A+ + ITT+ +P L+ + D GV F + + + T E A ++++ +G
Sbjct: 1161 IMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
>gi|87298843 ethanolamine kinase 1 isoform B [Homo sapiens]
Length = 258
Score = 30.8 bits (68), Expect = 7.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 427 QPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVA-PAKKAKPAMPQGKSTT 481
+P +++ NFL +G +S +R + + SR A P A PA+P+G+ T
Sbjct: 5 RPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
>gi|10092615 ethanolamine kinase 1 isoform A [Homo sapiens]
Length = 452
Score = 30.8 bits (68), Expect = 7.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 427 QPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVA-PAKKAKPAMPQGKSTT 481
+P +++ NFL +G +S +R + + SR A P A PA+P+G+ T
Sbjct: 5 RPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 30.4 bits (67), Expect = 9.5
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 379 RGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFL 438
+GGP +G++ G+V +P P P+ PP+++ +++
Sbjct: 456 QGGPGQPQGMQPPGKVLPPRRLP---------------------PGPSLPPSSSSSSSSS 494
Query: 439 LNASGSTSTP-----APSRTASFSESRADEVAPAKKAKPAMPQGKSTTL 482
+A P APS ++S +E++ AP +K +P KS +L
Sbjct: 495 SSAPQRPGGPTTHGDAPSSSSSLAEAQPPLAAPPQKPQPHPQLNKSQSL 543
>gi|10835091 bone morphogenetic protein 5 preproprotein [Homo
sapiens]
Length = 454
Score = 30.4 bits (67), Expect = 9.5
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 417 MALGHRPIPNQPPTAAHTANF----LLNASGSTSTPAPSRTASFSESRADEVAPAKKAKP 472
+ L HRP P P A +A L NA + P S S S A+E A+K P
Sbjct: 59 LGLPHRPRPFSPGKQASSAPLFMLDLYNAMTNEENPEESEY-SVRASLAEETRGARKGYP 117
Query: 473 AMPQG 477
A P G
Sbjct: 118 ASPNG 122
>gi|24797103 RAS guanyl releasing protein 2 [Homo sapiens]
Length = 609
Score = 30.4 bits (67), Expect = 9.5
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 25/122 (20%)
Query: 973 PDMRVQILKDYVRQHFPATPLLDYAL---EVEKITTSKKPNLILNVDGLIGV-------- 1021
P R +L+++ A P LD AL +EK+ S N ++ DG I
Sbjct: 400 PPPRPPVLEEWTSA---AKPKLDQALVVEHIEKMVESVFRNFDVDGDGHISQEEFQIIRG 456
Query: 1022 ------AFVDMLRNC-GSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLY 1074
AF D+ +N G +REE Y L VLG MGF+ ++ + L+
Sbjct: 457 NFPYLSAFGDLDQNQDGCISREEMVSYF----LRSSSVLGGRMGFVHNFQESNSLRPVAC 512
Query: 1075 RH 1076
RH
Sbjct: 513 RH 514
>gi|149158729 RAS guanyl releasing protein 2 [Homo sapiens]
Length = 609
Score = 30.4 bits (67), Expect = 9.5
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 25/122 (20%)
Query: 973 PDMRVQILKDYVRQHFPATPLLDYAL---EVEKITTSKKPNLILNVDGLIGV-------- 1021
P R +L+++ A P LD AL +EK+ S N ++ DG I
Sbjct: 400 PPPRPPVLEEWTSA---AKPKLDQALVVEHIEKMVESVFRNFDVDGDGHISQEEFQIIRG 456
Query: 1022 ------AFVDMLRNC-GSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLY 1074
AF D+ +N G +REE Y L VLG MGF+ ++ + L+
Sbjct: 457 NFPYLSAFGDLDQNQDGCISREEMVSYF----LRSSSVLGGRMGFVHNFQESNSLRPVAC 512
Query: 1075 RH 1076
RH
Sbjct: 513 RH 514
>gi|149158727 RAS guanyl releasing protein 2 [Homo sapiens]
Length = 609
Score = 30.4 bits (67), Expect = 9.5
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 25/122 (20%)
Query: 973 PDMRVQILKDYVRQHFPATPLLDYAL---EVEKITTSKKPNLILNVDGLIGV-------- 1021
P R +L+++ A P LD AL +EK+ S N ++ DG I
Sbjct: 400 PPPRPPVLEEWTSA---AKPKLDQALVVEHIEKMVESVFRNFDVDGDGHISQEEFQIIRG 456
Query: 1022 ------AFVDMLRNC-GSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLY 1074
AF D+ +N G +REE Y L VLG MGF+ ++ + L+
Sbjct: 457 NFPYLSAFGDLDQNQDGCISREEMVSYF----LRSSSVLGGRMGFVHNFQESNSLRPVAC 512
Query: 1075 RH 1076
RH
Sbjct: 513 RH 514
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,467,956
Number of Sequences: 37866
Number of extensions: 1907030
Number of successful extensions: 4608
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4586
Number of HSP's gapped (non-prelim): 34
length of query: 1091
length of database: 18,247,518
effective HSP length: 113
effective length of query: 978
effective length of database: 13,968,660
effective search space: 13661349480
effective search space used: 13661349480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.