BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|38261960 solute carrier family 47, member 2 isoform 1 [Homo sapiens] (602 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|38261960 solute carrier family 47, member 2 isoform 1 [Homo s... 1192 0.0 gi|153792564 solute carrier family 47, member 2 isoform 2 [Homo ... 1098 0.0 gi|22907060 solute carrier family 47, member 1 [Homo sapiens] 531 e-151 gi|239751237 PREDICTED: hypothetical protein XP_002347764 [Homo ... 100 3e-21 gi|98162668 hypothetical protein LOC56063 [Homo sapiens] 32 1.3 gi|13540547 solute carrier family 2 member 10 [Homo sapiens] 32 2.2 gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 32 2.2 gi|207444687 solute carrier family 41, member 2 [Homo sapiens] 31 2.9 gi|186910319 solute carrier family 12, member 3 isoform 3 [Homo ... 31 3.7 gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo ... 31 3.7 gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo ... 31 3.7 gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 31 3.7 gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 31 3.7 gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens] 30 4.9 gi|53828666 olfactory receptor, family 10, subfamily P, member 1... 30 4.9 gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 30 6.4 gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 30 6.4 >gi|38261960 solute carrier family 47, member 2 isoform 1 [Homo sapiens] Length = 602 Score = 1192 bits (3083), Expect = 0.0 Identities = 602/602 (100%), Positives = 602/602 (100%) Query: 1 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 60 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG Sbjct: 1 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 60 Query: 61 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 120 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL Sbjct: 61 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 120 Query: 121 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL 180 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL Sbjct: 121 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL 180 Query: 181 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV 240 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV Sbjct: 181 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV 240 Query: 241 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 300 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML Sbjct: 241 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 300 Query: 301 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD 360 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD Sbjct: 301 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD 360 Query: 361 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF 420 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF Sbjct: 361 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF 420 Query: 421 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL 480 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL Sbjct: 421 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL 480 Query: 481 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL 540 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL Sbjct: 481 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL 540 Query: 541 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT 600 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT Sbjct: 541 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT 600 Query: 601 RH 602 RH Sbjct: 601 RH 602 >gi|153792564 solute carrier family 47, member 2 isoform 2 [Homo sapiens] Length = 566 Score = 1098 bits (2839), Expect = 0.0 Identities = 566/602 (94%), Positives = 566/602 (94%), Gaps = 36/602 (5%) Query: 1 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 60 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG Sbjct: 1 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 60 Query: 61 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 120 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL Sbjct: 61 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 120 Query: 121 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL 180 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ Sbjct: 121 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ--- 177 Query: 181 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV 240 KITWPQVLSGVVGNCVNGVANYALVSV Sbjct: 178 ---------------------------------KITWPQVLSGVVGNCVNGVANYALVSV 204 Query: 241 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 300 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML Sbjct: 205 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 264 Query: 301 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD 360 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD Sbjct: 265 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD 324 Query: 361 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF 420 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF Sbjct: 325 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF 384 Query: 421 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL 480 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL Sbjct: 385 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL 444 Query: 481 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL 540 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL Sbjct: 445 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL 504 Query: 541 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT 600 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT Sbjct: 505 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT 564 Query: 601 RH 602 RH Sbjct: 565 RH 566 >gi|22907060 solute carrier family 47, member 1 [Homo sapiens] Length = 570 Score = 531 bits (1367), Expect = e-151 Identities = 281/578 (48%), Positives = 361/578 (62%), Gaps = 52/578 (8%) Query: 27 FGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGV 86 F E+ L L+GP FL Q++ F+I +S+VFCGHLGK+EL +VTLA+A +NV GVSVG Sbjct: 31 FREELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGF 90 Query: 87 GLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDV 146 GLSSACDTL+SQ++GS N KHVGVILQR ALVLLLCC PCWALFLNTQHILLLFRQDPDV Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDV 150 Query: 147 SRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSR 206 SRLTQ YV IFIP LP FLY L KYL NQG Sbjct: 151 SRLTQTYVTIFIPALPATFLYMLQVKYLLNQG---------------------------- 182 Query: 207 ASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLY 266 I PQ+++GV N VN +ANY + L+LGV GSA AN+ISQ+ + L LY Sbjct: 183 --------IVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLY 234 Query: 267 IVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSA 326 I+ KKLH TW GWS +CLQDW F LA+PSMLM+C+EWWAYE+GSFL G+L +V+L A Sbjct: 235 ILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGA 294 Query: 327 QAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLI 386 Q+++YE+A + YM+P G S+ VRVG ALGA D QA++S+ +L V ++ L+ Sbjct: 295 QSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLL 354 Query: 387 SILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAI 446 K+ +G+IFT D D+I LV+QV+P+Y+V H+FEA+ C GGVLRG+G Q GA VN I Sbjct: 355 LSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTI 414 Query: 447 TYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSG 506 YY++GLP+GI L F + +MGLW G++ C F+ + +L+WK A ++A+ H+ Sbjct: 415 GYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKKACQQAQVHAN 474 Query: 507 -------RQQQQRAESTATRPG-PEKAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEE 558 R PG PE L + T + G T S + R E Sbjct: 475 LKVNNVPRSGNSALPQDPLHPGCPEN--LEGILT-NDVGKTGEPQSDQQ-----MRQEEP 526 Query: 559 AHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVR 596 ++LS KQLV+RRG L L+VG+ VR Sbjct: 527 LPEHPQDGAKLSRKQLVLRRGLLLLGVFLILLVGILVR 564 >gi|239751237 PREDICTED: hypothetical protein XP_002347764 [Homo sapiens] Length = 177 Score = 100 bits (250), Expect = 3e-21 Identities = 46/68 (67%), Positives = 55/68 (80%) Query: 77 VNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHI 136 VNV G++VG GL+SA DTLMSQSFG N K VG+ILQRG L+L+LCC PCWA +NT+ I Sbjct: 30 VNVTGIAVGTGLASAYDTLMSQSFGVKNLKRVGIILQRGVLILMLCCFPCWADLVNTERI 89 Query: 137 LLLFRQDP 144 LLL +QDP Sbjct: 90 LLLLKQDP 97 >gi|98162668 hypothetical protein LOC56063 [Homo sapiens] Length = 140 Score = 32.3 bits (72), Expect = 1.3 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 27/128 (21%) Query: 269 LKKLHLETWAGWSSQCLQDWGPFF---SLAVPSMLMICVEWWAYEIGSFLMGL-LSVVDL 324 L+++H TWA Q LQ+ F +P +L C GS L L L+ DL Sbjct: 32 LQRVHEPTWA---QQLLQEMKTLFLNTEYLMPFLLNQC--------GSLLYYLTLASTDL 80 Query: 325 SAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGT 384 T+ I L+I + VG ALG + + KR+ VL+++GISL + + Sbjct: 81 ----------TLAVPICNSLAIIFTLIVGKALG--EDIGGKRAVAGMVLTVIGISLCITS 128 Query: 385 LISILKNQ 392 +S + Q Sbjct: 129 SVSKTQGQ 136 >gi|13540547 solute carrier family 2 member 10 [Homo sapiens] Length = 541 Score = 31.6 bits (70), Expect = 2.2 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 28/204 (13%) Query: 331 YEVATVT-YMIPLGLSIGV-CVRVGMALGAADTVQAKRSAVSGVL--------SIVGISL 380 YE+A ++ ++PL L G+ C+ +G+ S V G L +I+G +L Sbjct: 24 YELAVISGALLPLQLDFGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILGSNL 83 Query: 381 VL--GTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQA 438 VL G+L L L + A+V + + S+ CC+Y L G ++ Sbjct: 84 VLLAGSLTLGLAGSLAWLVLGR----AVVGFAISLSSM------ACCIYVSELVGPRQRG 133 Query: 439 FGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLA- 497 ++ Y G+ +GILL++ + + G G ATA V + L + A Sbjct: 134 V-----LVSLYEAGITVGILLSYALNYALAGTPWGWRHMFGWATAPAVLQSLSLLFLPAG 188 Query: 498 AEEAKKHSGRQQQQRAESTATRPG 521 +E H Q E+ PG Sbjct: 189 TDETATHKDLIPLQGGEAPKLGPG 212 >gi|167614500 lymphocyte-activation protein 3 precursor [Homo sapiens] Length = 525 Score = 31.6 bits (70), Expect = 2.2 Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 19/101 (18%) Query: 426 VYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAF 485 VY L G Q G A A LP G LL F++ LG+L+ + L T AF Sbjct: 425 VYFTELSSPGAQRSGRAPGA-------LPAGHLLLFLI--------LGVLSLLLLVTGAF 469 Query: 486 VAYTARLDW---KLAAEEAKKHSGRQQQQRAESTATRPGPE 523 + R W + +A E H Q Q + E P PE Sbjct: 470 GFHLWRRQWRPRRFSALEQGIHP-PQAQSKIEELEQEPEPE 509 >gi|207444687 solute carrier family 41, member 2 [Homo sapiens] Length = 573 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 114 RGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPV-IFLYNLLAK 172 + A VLLL +P +FL T H++ + LT ++++++ G + +F +A Sbjct: 467 KSAQVLLLLVIPGHLIFLYTIHLM-----KSGHTSLTIIFIVVYLFGAVLQVFTLLWIAD 521 Query: 173 YLQNQGWLKGQEEESPFQTPGLSIL 197 ++ + W KG++ +S F P L+ L Sbjct: 522 WMVHHFWRKGKDPDS-FSIPYLTAL 545 >gi|186910319 solute carrier family 12, member 3 isoform 3 [Homo sapiens] Length = 1021 Score = 30.8 bits (68), Expect = 3.7 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 235 YALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGW--SSQCLQDWGPFF 292 YA+ + + A IIS F + L+ + GW S Q W F Sbjct: 513 YAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFQYYNKWAALF 572 Query: 293 SLAVPSMLMICVEWWA--YEIGSFLMGLLSVV 322 + ++M + WWA IG L LL V+ Sbjct: 573 GAIISVVIMFLLTWWAALIAIGVVLFLLLYVI 604 >gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo sapiens] Length = 1029 Score = 30.8 bits (68), Expect = 3.7 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 235 YALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGW--SSQCLQDWGPFF 292 YA+ + + A IIS F + L+ + GW S Q W F Sbjct: 512 YAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFQYYNKWAALF 571 Query: 293 SLAVPSMLMICVEWWA--YEIGSFLMGLLSVV 322 + ++M + WWA IG L LL V+ Sbjct: 572 GAIISVVIMFLLTWWAALIAIGVVLFLLLYVI 603 >gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo sapiens] Length = 1030 Score = 30.8 bits (68), Expect = 3.7 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 235 YALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGW--SSQCLQDWGPFF 292 YA+ + + A IIS F + L+ + GW S Q W F Sbjct: 513 YAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFQYYNKWAALF 572 Query: 293 SLAVPSMLMICVEWWA--YEIGSFLMGLLSVV 322 + ++M + WWA IG L LL V+ Sbjct: 573 GAIISVVIMFLLTWWAALIAIGVVLFLLLYVI 604 >gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] Length = 441 Score = 30.8 bits (68), Expect = 3.7 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Query: 509 QQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSR 568 QQ +A+S+ PGP +A ++ A+ SSP T T S+ H+ RTP + S S Sbjct: 78 QQFQAQSSYP-PGPGRA--AAAASSSSPSCTPAT---SQGHL---RTPAQPPPASPAASS 128 Query: 569 LSVKQLVIRRGAALGAASAT 588 S V+R G AA+ T Sbjct: 129 SSSFAAVVRYGPGAAAAAGT 148 >gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] Length = 534 Score = 30.8 bits (68), Expect = 3.7 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Query: 509 QQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSR 568 QQ +A+S+ PGP +A ++ A+ SSP T T S+ H+ RTP + S S Sbjct: 78 QQFQAQSSYP-PGPGRA--AAAASSSSPSCTPAT---SQGHL---RTPAQPPPASPAASS 128 Query: 569 LSVKQLVIRRGAALGAASAT 588 S V+R G AA+ T Sbjct: 129 SSSFAAVVRYGPGAAAAAGT 148 >gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens] Length = 794 Score = 30.4 bits (67), Expect = 4.9 Identities = 14/44 (31%), Positives = 21/44 (47%) Query: 507 RQQQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYSRSECHV 550 R+ Q R PGP L+ + G+ PG +L S S+ H+ Sbjct: 233 RRTQSRPGGPPNPPGPSPKALAKMMGGAGPGSSLEARSPSDLHI 276 >gi|53828666 olfactory receptor, family 10, subfamily P, member 1 [Homo sapiens] Length = 313 Score = 30.4 bits (67), Expect = 4.9 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%) Query: 311 IGSFLMGLLSVVDLSAQA-----VIYEVATVTY-MIPLGLSIGVCVRVGMALGAADTVQA 364 I FL +L V+ L++ + AT+ + MIP L + +R+ A+ A + Q+ Sbjct: 175 IPHFLCDILPVLRLASAGKHRSEISVMTATIVFIMIPFSLIVTSYIRILGAILAMASTQS 234 Query: 365 KRSAVSGVLS-IVGISLVLGTL-ISILKNQLGHIFTNDEDVIALVSQVLPV 413 +R S S ++ +SL GT I+ ++ Q G T D + + + P+ Sbjct: 235 RRKVFSTCSSHLLVVSLFFGTASITYIRPQAGSSVTTDRVLSLFYTVITPM 285 >gi|188497758 ubiquitin associated protein 2-like isoform a [Homo sapiens] Length = 1087 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 500 EAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYS 544 EA HS ST + P P +V SS+ +GSS G++L + S Sbjct: 726 EANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNS 770 >gi|188497756 ubiquitin associated protein 2-like isoform b [Homo sapiens] Length = 983 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 500 EAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYS 544 EA HS ST + P P +V SS+ +GSS G++L + S Sbjct: 726 EANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNS 770 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.138 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,644,768 Number of Sequences: 37866 Number of extensions: 867919 Number of successful extensions: 3243 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 3230 Number of HSP's gapped (non-prelim): 23 length of query: 602 length of database: 18,247,518 effective HSP length: 108 effective length of query: 494 effective length of database: 14,157,990 effective search space: 6994047060 effective search space used: 6994047060 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.