Guide to the Human Genome
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Name: SLC47A2 Sequence: fasta or formatted (602aa) NCBI GI: 38261960
Description:

solute carrier family 47, member 2 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [566aa] solute carrier family 47, member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         55           2
 C cysteine            2.7         16           2
 D aspartate           2.3         14           1
 E glutamate           3.0         18           3
 F phenylalanine       4.8         29           2
 G glycine             8.3         50           2
 H histidine           2.5         15           1
 I isoleucine          5.3         32           2
 K lysine              2.7         16           2
 L leucine            14.0         84           3
 M methionine          2.3         14           1
 N asparagine          2.2         13           1
 P proline             3.7         22           1
 Q glutamine           4.5         27           4
 R arginine            3.8         23           2
 S serine              8.1         49           2
 T threonine           5.6         34           2
 V valine             10.6         64           2
 W tryptophan          1.8         11           2
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 47, member 2 isoform 1 
SLC47A2               0.919   solute carrier family 47, member 2 isoform 2 
SLC47A1               0.434   solute carrier family 47, member 1 
LOC100290701          0.064   PREDICTED: hypothetical protein XP_002347764 
C1orf91               0.006   hypothetical protein LOC56063 
SLC2A10               0.006   solute carrier family 2 member 10 
LAG3                  0.006   lymphocyte-activation protein 3 precursor 
SLC41A2               0.005   solute carrier family 41, member 2 
SLC12A3               0.005   solute carrier family 12, member 3 isoform 3 
SLC12A3               0.005   solute carrier family 12, member 3 isoform 2 
SLC12A3               0.005   solute carrier family 12, member 3 isoform 1 
BEND4                 0.005   BEN domain containing 4 isoform b 
BEND4                 0.005   BEN domain containing 4 isoform a 
WIZ                   0.004   widely-interspaced zinc finger motifs 
OR10P1                0.004   olfactory receptor, family 10, subfamily P, member 1...
UBAP2L                0.004   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.004   ubiquitin associated protein 2-like isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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