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Search of human proteins with 38195080
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38195080 BCSC-1 isoform 1 [Homo sapiens]
(786 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194306644 BCSC-1 isoform 1 [Homo sapiens] 1566 0.0
gi|38195080 BCSC-1 isoform 1 [Homo sapiens] 1566 0.0
gi|38195082 BCSC-1 isoform 2 [Homo sapiens] 829 0.0
gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 225 1e-58
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 161 2e-39
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 142 2e-33
gi|156119625 inter-alpha (globulin) inhibitor H1 [Homo sapiens] 67 5e-11
gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens] 67 5e-11
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 56 1e-07
gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein [... 49 2e-05
gi|218505703 von Willebrand factor A domain containing 3A [Homo ... 42 0.002
gi|27262622 neuron navigator 1 [Homo sapiens] 35 0.35
gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens] 33 0.78
gi|54112397 calcium channel, voltage-dependent, alpha 2/delta 3 ... 32 2.3
gi|31317228 early growth response 3 [Homo sapiens] 31 3.9
gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens] 31 5.1
gi|42741659 ATP-binding cassette, subfamily B, member 1 [Homo sa... 30 8.7
gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3 c... 30 8.7
gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3 c... 30 8.7
gi|13540533 N-acetylneuraminate pyruvate lyase [Homo sapiens] 30 8.7
gi|148596992 heart alpha-kinase [Homo sapiens] 30 8.7
>gi|194306644 BCSC-1 isoform 1 [Homo sapiens]
Length = 786
Score = 1566 bits (4055), Expect = 0.0
Identities = 786/786 (100%), Positives = 786/786 (100%)
Query: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA
Sbjct: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
Query: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG
Sbjct: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
Query: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL
Sbjct: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
Query: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP
Sbjct: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
Query: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD
Sbjct: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
Query: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM
Sbjct: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
Query: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG 420
QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG
Sbjct: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG 420
Query: 421 IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS 480
IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS
Sbjct: 421 IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS 480
Query: 481 AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD 540
AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD
Sbjct: 481 AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD 540
Query: 541 VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ 600
VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ
Sbjct: 541 VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ 600
Query: 601 GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY 660
GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY
Sbjct: 601 GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY 660
Query: 661 SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV 720
SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV
Sbjct: 661 SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV 720
Query: 721 DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD 780
DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD
Sbjct: 721 DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD 780
Query: 781 PAIFAF 786
PAIFAF
Sbjct: 781 PAIFAF 786
>gi|38195080 BCSC-1 isoform 1 [Homo sapiens]
Length = 786
Score = 1566 bits (4055), Expect = 0.0
Identities = 786/786 (100%), Positives = 786/786 (100%)
Query: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA
Sbjct: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
Query: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG
Sbjct: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
Query: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL
Sbjct: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
Query: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP
Sbjct: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
Query: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD
Sbjct: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
Query: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM
Sbjct: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
Query: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG 420
QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG
Sbjct: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFG 420
Query: 421 IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS 480
IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS
Sbjct: 421 IGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLS 480
Query: 481 AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD 540
AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD
Sbjct: 481 AKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPD 540
Query: 541 VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ 600
VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ
Sbjct: 541 VNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQ 600
Query: 601 GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY 660
GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY
Sbjct: 601 GPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDY 660
Query: 661 SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV 720
SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV
Sbjct: 661 SLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELV 720
Query: 721 DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD 780
DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD
Sbjct: 721 DSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVD 780
Query: 781 PAIFAF 786
PAIFAF
Sbjct: 781 PAIFAF 786
>gi|38195082 BCSC-1 isoform 2 [Homo sapiens]
Length = 415
Score = 829 bits (2141), Expect = 0.0
Identities = 415/415 (100%), Positives = 415/415 (100%)
Query: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA
Sbjct: 1 MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSA 60
Query: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG
Sbjct: 61 VYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPG 120
Query: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL
Sbjct: 121 SKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTL 180
Query: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP
Sbjct: 181 SMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTP 240
Query: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD
Sbjct: 241 SVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQD 300
Query: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM
Sbjct: 301 TSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLM 360
Query: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHR 415
QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHR
Sbjct: 361 QADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHR 415
>gi|210147462 von Willebrand factor A domain containing 5B1 [Homo
sapiens]
Length = 1215
Score = 225 bits (574), Expect = 1e-58
Identities = 168/570 (29%), Positives = 269/570 (47%), Gaps = 95/570 (16%)
Query: 15 VPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIV 74
+PL + V+ + + G++A+L Y N E P + FV+P+DE + V FEA++ + +
Sbjct: 13 LPLTASDVTSCVSGYALGLTASLTYGNLEAQPFQGLFVYPLDECTTVIGFEAVIADRVVT 72
Query: 75 AELQDKMKARTNYEKAISQGHQA----FLLEGDSSS----------------RDVFSCNV 114
+++DK K + + A L +G S + R +F N+
Sbjct: 73 VQIKDKAKLESGHFDASHVRSPTVTGNILQDGVSIAPHSCTPGKVTLDEDLERILFVANL 132
Query: 115 GNLQPGSKAAVTLKYVQELPLEADGALRFVLPAVLNPRY-QF----SGSSKDSCLNVKTP 169
G + P + + ELP GA+R +LPAV P QF +G+S
Sbjct: 133 GTIAPMENVTIFISTSSELPTLPSGAVRVLLPAVCAPTVPQFCTKSTGTSNQQAQGKDRH 192
Query: 170 I----VPVEDLPYTLSMVATIDSQHGIE-------KVQSNCPL----SPTEYLGEDKT-- 212
P L+ + + + +E +++ C L SPT + D
Sbjct: 193 CFGAWAPGSWNKLCLATLLNTEVSNPMEYEFNFQLEIRGPCLLAGVESPTHEIRADAAPS 252
Query: 213 -----SAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPG----HLMGDPS-- 261
S ++LA H FDR VE+LI+ +E H P V++E G +M G HL G
Sbjct: 253 ARSAKSIIITLANKHTFDRPVEILIHPSEPHMPHVLIEKG--DMTLGEFDQHLKGRTDFI 310
Query: 262 -----------------------------AMVSFYPNIPEDQPS--NTCGEFIFLMDRSG 290
M++F P++ QP GEFIFL+DRS
Sbjct: 311 KGMKKKSRAERKTEIIRKRLHKDIPHHSVIMLNFCPDLQSVQPCLRKAHGEFIFLIDRSS 370
Query: 291 SMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTM 350
SM S + + K+ +++ LKSL C FNI GFGS++++ FP S Y++ ++
Sbjct: 371 SM---------SGISMHRVKDAMLVALKSLMPACLFNIIGFGSTFKSLFPSSQTYSEDSL 421
Query: 351 EEALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRIN 410
A ++ M+AD+GGT IL+PL+ + R P GHP LFV TDG V +T V++ VR +
Sbjct: 422 AMACDDIQRMKADMGGTNILSPLKWVIRQPVHRGHPRLLFVITDGAVNNTGKVLELVRNH 481
Query: 411 RQKHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVS 470
RC+SFGIG L+KG+A S G++E + +R+Q K +++LK+++ PV+ DV+
Sbjct: 482 AFSTRCYSFGIGPNVCHRLVKGLASVSEGSAELLMEGERLQPKMVKSLKKAMAPVLSDVT 541
Query: 471 LSWHLPPGLSAKMLSPEQTVIFRGQRLISY 500
+ W P + + +F G+RL+ Y
Sbjct: 542 VEWIFPETTEVLVSPVSASSLFPGERLVGY 571
Score = 37.4 bits (85), Expect = 0.054
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 712 MAAQPAELVDSSG--WATILAVIWLHSNGKDLKCEWELLERKAVAWM 756
+ +P +V+ +G WAT++ + WL + EWEL+ KA +W+
Sbjct: 1125 LGLEPRAVVEHTGKLWATVVGLAWLEHSSASYFTEWELVAAKANSWL 1171
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 161 bits (408), Expect = 2e-39
Identities = 156/596 (26%), Positives = 270/596 (45%), Gaps = 53/596 (8%)
Query: 15 VPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIV 74
VPL+ + + I + VA V Y N+ VP+EA ++FP+D+ +AV FEA ++GK IV
Sbjct: 621 VPLEDVHIKGRIIDTVAQVIVFQTYTNKSHVPIEAKYIFPLDDKAAVCGFEAFINGKHIV 680
Query: 75 AELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELP 134
E+++K +A+ Y +A++QGH A+L+ D+ DVF+ +VGNL P +K + + Y+ EL
Sbjct: 681 GEIKEKEEAQQEYLEAVTQGHGAYLMSQDAP--DVFTVSVGNLPPKAKVLIKITYITELS 738
Query: 135 LEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEK 194
+ + F +PA + P Q +++ V+ + + S+ +I+ + IE
Sbjct: 739 ILGTVGV-FFMPATVAPWQQDKALNENLQDTVEKICIKEIGTKQSFSLTMSIEMPYVIEF 797
Query: 195 VQSNCPLSPTEYLGEDKT--SAQVSLAAGHKFDRD-VELLIYYNEVHTPSVVLEMGMPNM 251
+ S T L + +T A +S G D L I + + P + +E P
Sbjct: 798 I-----FSDTHELKQKRTDCKAVISTMEGSSLDSSGFSLHIGLSAAYLPRMWVEK-HPEK 851
Query: 252 KPGHLMGDPSAMVSFYPNIPEDQPSNTC-GEFIFLMDRSGSMQSPMSSQDTSQLRIQAAK 310
+ + M+ F P++ D P E I +D S SM+ Q AK
Sbjct: 852 E------SEACMLVFQPDLDVDLPDLASESEVIICLDCSSSMEGVTFLQ---------AK 896
Query: 311 ETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLMQADLGGTEIL 370
+ + L + NI FG+ Y+ F T TM A + +G T+
Sbjct: 897 QIALHALSLVGEKQKVNIIQFGTGYKELFSYPKHITSNTM--AAEFIMSATPTMGNTDFW 954
Query: 371 APLQNIYRGPSIPGH-PLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFGIGEGTSTSL 429
L+ Y P + + +DG + D ++ V+ +R R F+ GIG + +
Sbjct: 955 KTLR--YLSLLYPARGSRNILLVSDGHLQDESLTLQLVKRSRPHTRLFACGIGSTANRHV 1012
Query: 430 IKGIARASGGTSEFITGKDR--MQSKALRTLKRSLQPVVEDVSLSW-HLPPGLSAKMLSP 486
++ +++ G E+ K + + + + R P VS+ W L P + + +P
Sbjct: 1013 LRILSQCGAGVFEYFNAKSKHSWRKQIEDQMTRLCSPSCHSVSVKWQQLNPDVPEALQAP 1072
Query: 487 EQT-VIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPDVNLTI 545
Q +F RL+ Y G +P T +C +Q K F V+ + + I
Sbjct: 1073 AQVPSLFLNDRLLVY----GFIPHC-TQATLCA--LIQEKEFRTMVS-TTELQKTTGTMI 1124
Query: 546 HRLAAKSLLQTKDMGL---RETPASDKKDAL-----NLSLESGVISSFTAFIAINK 593
H+LAA++L++ + G+ ET KK L LS E+ +I+ FT+F+A+ K
Sbjct: 1125 HKLAARALIRDYEDGILHENETSHEMKKQTLKSLIIKLSKENSLITQFTSFVAVEK 1180
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 142 bits (357), Expect = 2e-33
Identities = 133/568 (23%), Positives = 228/568 (40%), Gaps = 96/568 (16%)
Query: 14 PVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKI 73
P+PL V V A L Y N + P++ FV+P+ E V FEA G+++
Sbjct: 12 PLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRV 71
Query: 74 VAELQDKMKARTNYEKAISQG---------HQAFLLEGDSSSRDVFSCNVGNLQPGSKAA 124
+LQ + +++ +A+ G Q L+ + +R G +
Sbjct: 72 SFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLPTGIIAAAGTMT 131
Query: 125 VTLKYVQELPLEADGALRFVLPAVLNPRYQ-----------FSGSSKDSCLNVKT----- 168
VTL +ELP DG L LP VL P S SC V +
Sbjct: 132 VTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTSCFGVGSLQEEG 191
Query: 169 ----PIVPVEDL---------PYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQ 215
+ D+ PYT S + + ++S + ++A
Sbjct: 192 LAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADAPPHASSAAT 251
Query: 216 --VSLAAGHKFDRDVELLIYYNEVHTPSVVLEMG-------------------------- 247
V+LA GH DR +E+L++ +E H P ++LE G
Sbjct: 252 ICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARRDFQRLQRRDSD 311
Query: 248 -------MPNMKPGHLMGDPSAMVSFYPNIPEDQPSN---TCGEFIFLMDRSGSMQSPMS 297
+ ++ +P +SF P++ +P + E +FL+D S
Sbjct: 312 GDRQVWFLQRRFHKDILLNPVLALSFCPDL-SSKPGHLGTATRELLFLLDSSSV------ 364
Query: 298 SQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRV 357
A K+ ++L +KSLP N+ FG+ + FPES + ++ +
Sbjct: 365 ----------AHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESI 414
Query: 358 KLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGE--VTDTFSVIKEVRINRQKHR 415
+ +Q G ++LA L P +P QLF+ T T ++ +R +R R
Sbjct: 415 ETLQVPSGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTAR 474
Query: 416 CFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHL 475
CFSFG+G T L++G++ S G + F+ R+Q ++ L+++L+P + D+S+ W +
Sbjct: 475 CFSFGLGP-TCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFV 533
Query: 476 PPGLSAKMLSPEQTVIFRGQRLISYAQL 503
P + A + E ++ G +L+ Y L
Sbjct: 534 PDTVEALLTPREIPALYPGDQLLGYCSL 561
Score = 33.5 bits (75), Expect = 0.78
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 725 WATILAVIWLHSNGKDLKCEWELLERKAVAWMRA 758
WAT +A+ WL EWEL KA W+RA
Sbjct: 1167 WATAVALAWLEHRCAAAFDEWELTAAKADCWLRA 1200
>gi|156119625 inter-alpha (globulin) inhibitor H1 [Homo sapiens]
Length = 911
Score = 67.4 bits (163), Expect = 5e-11
Identities = 97/488 (19%), Positives = 186/488 (38%), Gaps = 84/488 (17%)
Query: 17 LKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIVAE 76
++S+ V+ + A T N E F + + + + F DG + +
Sbjct: 53 IRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGD 112
Query: 77 LQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELPLE 136
++DK+ A Y KA G A L+ + + F+ ++ + P SK L Y + L
Sbjct: 113 IKDKVTAWKQYRKAAISGENAGLVRASGRTMEQFTIHL-TVNPQSKVTFQLTYEEVLKRN 171
Query: 137 ADGALRFVLPAVLNPR------------YQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVA 184
+++ + + P+ ++ G SK L+ + +P E T+
Sbjct: 172 H---MQYEIVIKVKPKQLVHHFEIDVDIFEPQGISK---LDAQASFLPKELAAQTIKKSF 225
Query: 185 TIDSQHGIEKV----QSNCPLSPTEYL-GEDKTSAQVSLAAGHKFDRDVELLIYYNEVHT 239
+ H + + Q +CP T L G K + VS D+ +LL+ N
Sbjct: 226 SGKKGHVLFRPTVSQQQSCPTCSTSLLNGHFKVTYDVSR------DKICDLLVANNHF-- 277
Query: 240 PSVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQ 299
H P + + N+ +F++D SGSM+
Sbjct: 278 --------------AHFFA-PQNLTNMNKNV------------VFVIDISGSMRGQ---- 306
Query: 300 DTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKL 359
+++ KE L+ +L + G YF++ FG+ ++ V+ ++ ++ A V+
Sbjct: 307 -----KVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSWKGSLVQASEANLQAAQDFVRG 361
Query: 360 MQAD---------LGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGE----VTDTFSVIKE 406
D L G EIL +Q P + H L + TDG+ VTD ++K
Sbjct: 362 FSLDEATNLNGGLLRGIEILNQVQESL--PELSNHASILIMLTDGDPTEGVTDRSQILKN 419
Query: 407 VR-INRQKHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPV 465
VR R + ++ G G + ++ ++ + G ++ I + + +P+
Sbjct: 420 VRNAIRGRFPLYNLGFGHNVDFNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVAKPL 479
Query: 466 VEDVSLSW 473
+ DV L +
Sbjct: 480 LVDVDLQY 487
>gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens]
Length = 930
Score = 67.4 bits (163), Expect = 5e-11
Identities = 130/638 (20%), Positives = 251/638 (39%), Gaps = 84/638 (13%)
Query: 9 TLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALV 68
T + + + S++V + A T N EA F + + + + +F ++
Sbjct: 27 TAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNRANTVQEATFQMELPKKAFITNFSMII 86
Query: 69 DGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLK 128
DG +++K +A+ Y A+++G A L++ + + F +V ++ P +K L
Sbjct: 87 DGMTYPGIIKEKAEAQAQYSAAVAKGKSAGLVKATGRNMEQFQVSV-SVAPNAKITFELV 145
Query: 129 YVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTP----IVPVEDLPYTLSMVA 184
Y +EL G +L + P+ D +++ P + E T +V
Sbjct: 146 Y-EELLKRRLGVYELLLK--VRPQQLVKHLQMD--IHIFEPQGISFLETESTFMTNQLVD 200
Query: 185 TIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVL 244
+ + K +++ PT + Q ++ G+ L+I Y+ +
Sbjct: 201 ALTTWQN--KTKAHIRFKPTLSQQQKSPEQQETVLDGN-------LIIRYDVDRA----I 247
Query: 245 EMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQDTSQL 304
G ++ G+ + F P P N +F++D+SGSM S
Sbjct: 248 SGGSIQIENGYFVH------YFAPEGLTTMPKNV----VFVIDKSGSM---------SGR 288
Query: 305 RIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLMQADL 364
+IQ +E LI +L L FN+ F + P V + + + +A +QA L
Sbjct: 289 KIQQTREALIKILDDLSPRDQFNLIVFSTEATQWRPSLVPASAENVNKARSFAAGIQA-L 347
Query: 365 GGTEI-------LAPLQNIYRGPSIPGHPLQLFV-FTDGEVTDTFSVIKEVRINRQ---- 412
GGT I + L + + +P + L + TDG+ T + + ++ N +
Sbjct: 348 GGTNINDAMLMAVQLLDSSNQEERLPEGSVSLIILLTDGDPTVGETNPRSIQNNVREAVS 407
Query: 413 -KHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDV-- 469
++ F G G S + ++ +A +GG + I S + L+ Q V +
Sbjct: 408 GRYSLFCLGFGFDVSYAFLEKLALDNGGLARRI----HEDSDSALQLQDFYQEVANPLLT 463
Query: 470 SLSWHLPPGLSAKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFED 529
++++ P ++ ++F+G ++ +L R P T V K Q TF+
Sbjct: 464 AVTFEYPSNAVEEVTQNNFRLLFKGSEMVVAGKLQDRGPDV-LTATVSGKLPTQNITFQT 522
Query: 530 KVTFPLQ------PKPDVNLTIHRLAAKSLLQTKDMGLRETPASD------KKDALNLSL 577
+ + Q PK + + RL A L + + + ASD + ALNLSL
Sbjct: 523 ESSVAEQEAEFQSPKYIFHNFMERLWA--YLTIQQLLEQTVSASDADQQALRNQALNLSL 580
Query: 578 ESGVISSFTAFIAINKE-------LNKPVQGPLAHRDV 608
++ T+ + + KP++G +R+V
Sbjct: 581 AYSFVTPLTSMVVTKPDDQEQSQVAEKPMEGESRNRNV 618
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 55.8 bits (133), Expect = 1e-07
Identities = 141/635 (22%), Positives = 249/635 (39%), Gaps = 94/635 (14%)
Query: 8 LTLHREPVP--------LKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDS 59
LT PVP + S S+ + A T N EA F + +
Sbjct: 20 LTYQGPPVPASSSTKLLMTSYSMRSTVVSRYAHTLVTSVLFNPHAEAHEAIFDLDLPHLA 79
Query: 60 AVYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQP 119
+ +F ++ K +AE+++K +A+ YE+A QG A + + F + +L
Sbjct: 80 FISNFTMTINNKVYIAEVKEKHQAKKIYEEAHQQGKTAAHVGIRDRESEKFRIST-SLAA 138
Query: 120 GSKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYT 179
G++ +L Y +EL G + V+ L P S + ++ +T I V P
Sbjct: 139 GTEVTFSLAY-EELLQRHQGQYQLVVS--LRPGQLVKRLSIEVTVSERTGISYVHIPPLR 195
Query: 180 LSMVAT------IDSQHG--IEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELL 231
+ T +DS IE+ ++ ++ L + + + + A + L
Sbjct: 196 TGRLRTNAHASEVDSPPSTRIERGETCVRITYCPTLQDQSSISGSGIMA--------DFL 247
Query: 232 IYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSFYPN--IPEDQPSNTCGEFIFLMDRS 289
+ Y+ VV+E ++GD ++ + P P +F++D S
Sbjct: 248 VQYD------VVME---------DIIGDVQIYDDYFIHYFAPRGLPPME-KNVVFVIDVS 291
Query: 290 GSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEAC-FPESVKYTQQ 348
SM +++ K + ++L L YFNI F + S++ T Q
Sbjct: 292 SSMFG---------TKMEQTKTAMNVILSDLQANDYFNIISFSDTVNVWKAGGSIQATIQ 342
Query: 349 TMEEALGRVKLMQADLGGTEILAPL-----------QNIYRGPSIPGHPLQLFVFTDGEV 397
+ A + M+AD G T++ + L Q RGPS+ PL +F+ TDGE
Sbjct: 343 NVHSAKDYLHCMEAD-GWTDVNSALLAAASVLNHSNQEPGRGPSVGRIPLIIFL-TDGEP 400
Query: 398 T---DTFSVIKEVRINRQKHR--CFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQS 452
T T SVI HR FS G+ +L++ ++ + G + I +D +
Sbjct: 401 TAGVTTPSVILSNVRQALGHRVSLFSLAFGDDADFTLLRRLSLENRGIARRIY-EDTDAA 459
Query: 453 KALRTLKRSL-QPVVEDVSLSW-HLPPGLSAKMLSPE----QTVIFRGQRLISYAQLTGR 506
L+ L + P++ DV L++ G S + P ++ GQ +L
Sbjct: 460 LQLKGLYEEISMPLLADVRLNYLGGLVGASPWAVFPNYFGGSELVVAGQVQPGKQELGIH 519
Query: 507 MPAAETTGEVCLKYTLQGKTFEDKVTF--PLQPKPDVNLTIHRLAA--------KSLLQT 556
+ A ++ + + +G T + F P +P P+V I RL A + Q
Sbjct: 520 LAARGPKDQLLVAHHSEGATNNSQKAFGCPGEPAPNVAHFIRRLWAYVTIGELLDAHFQA 579
Query: 557 KDMGLRETPASDKKDALNLSLESGVISSFTAFIAI 591
+D R A+ LNLSLE ++ T+ + +
Sbjct: 580 RDTTTRHLLAA---KVLNLSLEYNFVTPLTSLVMV 611
>gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein
[Homo sapiens]
Length = 890
Score = 48.5 bits (114), Expect = 2e-05
Identities = 86/423 (20%), Positives = 152/423 (35%), Gaps = 60/423 (14%)
Query: 36 TLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIVAELQDKMKARTNYEKAISQGH 95
T+ N E F + + + + +F +DG +++K A+ YEKA+SQG
Sbjct: 64 TMRAVNRADTAKEVSFDVELPKTAFITNFTLTIDGVTYPGNVKEKEVAKKQYEKAVSQGK 123
Query: 96 QAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQF 155
A L++ + F+ +V N+ GSK L Y +EL G L
Sbjct: 124 TAGLVKASGRKLEKFTVSV-NVAAGSKVTFELTY-EELLKRHKGKYEMYLK--------- 172
Query: 156 SGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQ 215
V + L + I GI + + + LG T +
Sbjct: 173 ---------------VQPKQLVKHFEIEVDIFEPQGISMLDAEASFITNDLLGSALTKS- 216
Query: 216 VSLAAGH-----KFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSFY-PN 269
S GH D+ + + + + PG++ V F+ P
Sbjct: 217 FSGKKGHVSFKPSLDQQRSCPTCTDSLLNGDFTITYDVNRESPGNVQIVNGYFVHFFAPQ 276
Query: 270 IPEDQPSNTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIY 329
P N F++D SGSM + +++ KE L+ +L+ + Y N
Sbjct: 277 GLPVVPKNVA----FVIDISGSM---------AGRKLEQTKEALLRILEDMQEEDYLNFI 323
Query: 330 GFGSSYEACFPESVKYTQQTMEEALGRVKLMQADLGGTEI-------LAPLQNIYRGPSI 382
F V+ T + ++EA VK M+ D G T I ++ L I
Sbjct: 324 LFSGDVSTWKEHLVQATPENLQEARTFVKSME-DKGMTNINDGLLRGISMLNKAREEHRI 382
Query: 383 PGHPLQLFV-FTDGEVTDTFSVIKEVRINRQ-----KHRCFSFGIGEGTSTSLIKGIARA 436
P + + TDG+ S ++++ N + K ++ G G + + ++ +A
Sbjct: 383 PERSTSIVIMLTDGDANVGESRPEKIQENVRNAIGGKFPLYNLGFGNNLNYNFLENMALE 442
Query: 437 SGG 439
+ G
Sbjct: 443 NHG 445
>gi|218505703 von Willebrand factor A domain containing 3A [Homo
sapiens]
Length = 1184
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 285 LMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGC-YFNIYGFGSSYEACFPESV 343
L+D SGSM + Q E ++L+ + L C FN+ F S+++ V
Sbjct: 963 LLDTSGSMGPYLQ---------QVKTELVLLIWEQLRKCCDSFNLLSFAESFQSWQDTLV 1013
Query: 344 KYTQQTMEEALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFS- 402
+ T EA+ V +QA G T IL L + + G L++ TDG+ + S
Sbjct: 1014 ETTDAACHEAMQWVTHLQAQ-GSTSILQALLKAFSFHDLEG----LYLLTDGKPDTSCSL 1068
Query: 403 VIKEVRINRQKH----RCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRM 450
V+ EV+ R+K S + + ++ +A +GG G+D +
Sbjct: 1069 VLNEVQKLREKRDVKVHTISLNCSDRAAVEFLRKLASFTGGRYHCPVGEDTL 1120
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 34.7 bits (78), Expect = 0.35
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 32/271 (11%)
Query: 371 APLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFGIGEGTSTSLI 430
A I R SIP H +++ ++ T S+ + R K S + T
Sbjct: 1004 ATTPRITRSNSIPTHEAAFELYSGSQMGSTLSLAE-----RPKGMIRSGSFRDPTDDVHG 1058
Query: 431 KGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLSAKMLSPEQTV 490
++ AS +S + + ++RMQS+ +R L+R L+ E V+ L++++ + V
Sbjct: 1059 SVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEKVAT-------LTSQLSANANLV 1111
Query: 491 IFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPDVNLTIHRLAA 550
Q L++ +T R+ T E + + + + F + + I
Sbjct: 1112 AAFEQSLVN---MTSRLRHLAETAE---EKDTELLDLRETIDFLKKKNSEAQAVIQGALN 1165
Query: 551 KSLLQTKDMGLRETPASDKKDALN-LSLESGVISSFTAFIAINKE-------------LN 596
S K++ ++ +SD +LN ++ S + SS A K+ +
Sbjct: 1166 ASETTPKELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKKKSWLRSSFNKAFSIK 1225
Query: 597 KPVQGPLAHRDVPRPILLGASAPLKIKCQSG 627
K + ++ D+ +SAP K Q G
Sbjct: 1226 KGPKSASSYSDIEEIATPDSSAPSSPKLQHG 1256
>gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]
Length = 1531
Score = 33.5 bits (75), Expect = 0.78
Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 477 PGLSAKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQ 536
P LS K L P+++V+ + A + G V L + F D+
Sbjct: 1362 PKLSNKELKPQKSVV-------------SDLEADDVKGSVPLSSSPPATHFPDETEIT-N 1407
Query: 537 PKPDVNLTIHRLAAKSLLQTKDMGL--RETPASDKKDALNLSLESGVISSFTAFIAINKE 594
P P N+T+ + AAKS T G R P K+D +L SGV N+
Sbjct: 1408 PVPKKNVTVKKTAAKSQSSTSTTGAKKRAAPKGTKRDP---ALNSGVSQKPDPAKTKNRR 1464
Query: 595 LNKP 598
KP
Sbjct: 1465 KRKP 1468
>gi|54112397 calcium channel, voltage-dependent, alpha 2/delta 3
subunit [Homo sapiens]
Length = 1091
Score = 32.0 bits (71), Expect = 2.3
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 274 QPSNTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGS 333
Q + + + + L+D SGSM+ LR+ AK+T+ +L +L +FNI +
Sbjct: 249 QAATSPKDVVILVDVSGSMKG---------LRLTIAKQTVSSILDTLGDDDFFNIIAYNE 299
Query: 334 S---YEACFPESVKYTQQTMEEALGR--VKLMQADLGGTEI-LAPLQNIYRGPSIPGH-- 385
E C ++ +T +E KL +G +I L NI + G
Sbjct: 300 ELHYVEPCLNGTLVQADRTNKEHFREHLDKLFAKGIGMLDIALNEAFNILSDFNHTGQGS 359
Query: 386 --PLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFGIG-EGTSTSLIKGIARASGGTSE 442
+ + TDG V ++ + +K R F++ IG E +K +A A+ G
Sbjct: 360 ICSQAIMLITDGAVDTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLKWMACANKGFFT 419
Query: 443 FITGKDRMQSKALRTLKRSLQPVVED 468
I+ +Q + L +P V D
Sbjct: 420 QISTLADVQENVMEYLHVLSRPKVID 445
>gi|31317228 early growth response 3 [Homo sapiens]
Length = 387
Score = 31.2 bits (69), Expect = 3.9
Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 194 KVQSNCPLSPTEYLGE--DKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNM 251
K+ P++ + L + D + +A + F + +++YN++ T +V +++G+ N
Sbjct: 4 KLAEKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENV-MDIGLTNE 62
Query: 252 KP-------GHLMGDP-SAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSP-----MSS 298
KP G P + V++ D PSN C + I + +G + P +S+
Sbjct: 63 KPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALST 122
Query: 299 QDTSQLRIQAAKETLILLLKSLP 321
Q ++ +Q + + + +LP
Sbjct: 123 QTSTASMVQPPQGDVEAMYPALP 145
>gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens]
Length = 346
Score = 30.8 bits (68), Expect = 5.1
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 136 EADGALRFVLP-AVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEK 194
E +G+L +VLP + + G S ++++ I T + ATID +H +
Sbjct: 25 EPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVR 84
Query: 195 VQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEM 246
N L+ + G+D + R+VE+LIY +V + + +M
Sbjct: 85 FLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDM 136
>gi|42741659 ATP-binding cassette, subfamily B, member 1 [Homo
sapiens]
Length = 1280
Score = 30.0 bits (66), Expect = 8.7
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 653 KTFQMDDYSLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIM 712
KT +D YS GL+ + + + FGE ++++ + D+ + G+SLE +
Sbjct: 1014 KTPLIDSYSTEGLMPNTLEGNVTFGE-----VVFN------YPTRPDIPVLQGLSLE-VK 1061
Query: 713 AAQPAELVDSSGWATILAVIWLHS-----NGKDLKCEWELLERKAVAWMRAHAG 761
Q LV SSG V L GK L + + ++R V W+RAH G
Sbjct: 1062 KGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVL-LDGKEIKRLNVQWLRAHLG 1114
>gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 2 [Homo sapiens]
Length = 2277
Score = 30.0 bits (66), Expect = 8.7
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 218 LAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVS-FYPNIPEDQPS 276
L AG + DRD + + P G P+ P L A+ YP + QP+
Sbjct: 1831 LRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPEPLPAHRQALGERLYPRVQAMQPA 1890
Query: 277 NTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLI 314
L+D S S ++S+D+ + R+ A E +I
Sbjct: 1891 FASKITGMLLDYPSSAASLLASEDSLRARVDEAMELII 1928
>gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 1 [Homo sapiens]
Length = 2796
Score = 30.0 bits (66), Expect = 8.7
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 218 LAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVS-FYPNIPEDQPS 276
L AG + DRD + + P G P+ P L A+ YP + QP+
Sbjct: 2350 LRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPEPLPAHRQALGERLYPRVQAMQPA 2409
Query: 277 NTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLI 314
L+D S S ++S+D+ + R+ A E +I
Sbjct: 2410 FASKITGMLLDYPSSAASLLASEDSLRARVDEAMELII 2447
>gi|13540533 N-acetylneuraminate pyruvate lyase [Homo sapiens]
Length = 320
Score = 30.0 bits (66), Expect = 8.7
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 392 FTDGEVTDTFSVIKEVRINRQKHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQ 451
F+D ++ D + + NRQ+ F FG+ E ++L+ G A G T ++ K
Sbjct: 174 FSDTDLLDFGQCVDQ---NRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQM 230
Query: 452 SKALRTLKRSL 462
+A SL
Sbjct: 231 LEAFEQKDFSL 241
>gi|148596992 heart alpha-kinase [Homo sapiens]
Length = 2170
Score = 30.0 bits (66), Expect = 8.7
Identities = 69/318 (21%), Positives = 125/318 (39%), Gaps = 47/318 (14%)
Query: 154 QFSGSSKDSCLNVK---TPIVPVEDLPYTLSMVATID---SQHGIEKVQ-SNCPLSPTEY 206
Q S +S +C + K + + P+ +TL++ T + + KV+ S PL+ T +
Sbjct: 867 QVSETSVSTCKSSKDGNSVMSPLFTSTFTLNISHTASEGATGENLAKVENSTYPLASTVH 926
Query: 207 LGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSF 266
G+++ S S + +LL N P V + G + P D +A +
Sbjct: 927 AGQEQPSPSNSGGLD-----ETQLLSSENN---PLVQFKEG-GDKSPSPSAADTTATPAS 977
Query: 267 YPNI---PEDQPSNTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIG 323
Y +I P ++P+ L + Q+ ++DTS + I L S+P
Sbjct: 978 YSSIVSFPWEKPTT-------LTANNECFQATRETEDTSTVTIATEVHPAKYLAVSIPED 1030
Query: 324 CYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLMQADLGGTEILAPLQNIYRGPSIP 383
+ E FP + + + + + +V+L L G I + + + R PS+P
Sbjct: 1031 KH------AGGTEERFPRA---SHEKVSQFPSQVQLDHI-LSGATIKSTKELLCRAPSVP 1080
Query: 384 GHPLQLFVFTDGE--------VTDTFSVIKEVRINRQKHRCFSFGIGE-GTSTSLIKGIA 434
G P + +GE D S K ++R R + E G+ T +G+
Sbjct: 1081 GVPHHVLQLPEGEGFCSNSPLQVDNLSGDKSQTVDRADFRSYEENFQERGSETK--QGVQ 1138
Query: 435 RASGGTSEFITGKDRMQS 452
+ S ++ D QS
Sbjct: 1139 QQSLSQQGSLSAPDFQQS 1156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,288,119
Number of Sequences: 37866
Number of extensions: 1393340
Number of successful extensions: 2958
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2932
Number of HSP's gapped (non-prelim): 32
length of query: 786
length of database: 18,247,518
effective HSP length: 110
effective length of query: 676
effective length of database: 14,082,258
effective search space: 9519606408
effective search space used: 9519606408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.