Search of human proteins with 37574728

Search of human proteins with 37574728

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|37574728 BH3 interacting domain death agonist isoform 3
[Homo sapiens]
         (99 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37574728 BH3 interacting domain death agonist isoform 3 [Homo...   194   2e-50
gi|37574726 BH3 interacting domain death agonist isoform 1 [Homo...   194   2e-50
gi|4557361 BH3 interacting domain death agonist isoform 2 [Homo ...   194   2e-50
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   0.54 
gi|4507943 exportin 1 [Homo sapiens]                                   28   1.2  
gi|16262452 cingulin [Homo sapiens]                                    28   1.6  
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa...    27   2.7  
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap...    27   2.7  
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              27   2.7  
gi|45356151 non-SMC condensin II complex, subunit D3 [Homo sapiens]    27   3.5  
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo...    27   4.6  
gi|153791839 sodium channel associated protein 1 [Homo sapiens]        27   4.6  
gi|194248095 epsin 1 isoform b [Homo sapiens]                          26   6.0  
gi|203096856 kinesin family member 7 [Homo sapiens]                    26   6.0  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             26   7.8  

>gi|37574728 BH3 interacting domain death agonist isoform 3 [Homo
          sapiens]
          Length = 99

 Score =  194 bits (492), Expect = 2e-50
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 60
          MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA
Sbjct: 1  MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 60

Query: 61 KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 99
          KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD
Sbjct: 61 KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 99


>gi|37574726 BH3 interacting domain death agonist isoform 1 [Homo
           sapiens]
          Length = 241

 Score =  194 bits (492), Expect = 2e-50
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 60
           MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA
Sbjct: 143 MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 202

Query: 61  KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 99
           KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD
Sbjct: 203 KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 241


>gi|4557361 BH3 interacting domain death agonist isoform 2 [Homo
           sapiens]
          Length = 195

 Score =  194 bits (492), Expect = 2e-50
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 60
           MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA
Sbjct: 97  MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 156

Query: 61  KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 99
           KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD
Sbjct: 157 KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 195


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 8/73 (10%)

Query: 29   RDLATALEQLLQAYPRDMEKEK-------TMLVLALLLAKKVASHTPSLLRD-VFHTTVN 80
            RDL T LE+L + Y + +E+E+       T++ L   LA+K    + S L++  F   ++
Sbjct: 2075 RDLQTQLEELQKKYQQKLEQEENPGNDNVTIMELQTQLAQKTTLISDSKLKEQEFREQIH 2134

Query: 81   FINQNLRTYVRSL 93
             +   L+ Y +++
Sbjct: 2135 NLEDRLKKYEKNV 2147


>gi|4507943 exportin 1 [Homo sapiens]
          Length = 1071

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 44  RDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQNLRTY 89
           R+ E   TM ++   L   + +  P +   VF  T+N IN++   Y
Sbjct: 796 REPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEY 841


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 1   MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVL 55
           +D+ +    + GL  +  N  RS++DR R L   LE+ +     ++++EK  + L
Sbjct: 934 LDKELLAQRLQGLEQEAENKKRSQDDRARQL-KGLEEKVSRLETELDEEKNTVEL 987


>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
           sapiens]
          Length = 1185

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 22  RSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVAS 65
           R  ED+NR L   LE   Q   + + K +T+  +   LA++VA+
Sbjct: 358 RQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAA 401


>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
           sapiens]
          Length = 1202

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 22  RSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVAS 65
           R  ED+NR L   LE   Q   + + K +T+  +   LA++VA+
Sbjct: 358 RQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAA 401


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 2  DRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAK 61
          D S+ PG    L  +LR      E  N  LA A E   + Y R +++    +V ALL  K
Sbjct: 22 DGSMEPGTCQELLHRLREL----EAENSALAQANENQRETYERCLDEVANHVVQALLNQK 77

Query: 62 KVASHTPSLLRDVF 75
           +      L + VF
Sbjct: 78 DLREECIKLKKRVF 91


>gi|45356151 non-SMC condensin II complex, subunit D3 [Homo sapiens]
          Length = 1498

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 10  VNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPS 69
           ++ + L+   T   +ED        L  + Q  P  +EK   +L+ ++L +   A H+PS
Sbjct: 835 LSNIVLKENGTGNMDEDLLVKYIFTLGDIAQLCPARVEKRIFLLIQSVLASSADADHSPS 894


>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
           sapiens]
          Length = 2168

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 18  RNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKT----MLVLALLLAKKVASHTPS 69
           +NTS        +L +  EQ  QA+P  ++K+++      V+A L   K  S +P+
Sbjct: 414 KNTSEESSLLTSELRSKREQYKQAFPSQLKKQESSKSLKKVIAALSNPKATSSSPA 469


>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
          Length = 688

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 10  VNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDME 47
           V  + LQL N  +  E  + +L  A+E+ L+A+P   E
Sbjct: 81  VGEMKLQLENVIKENERLHSELKDAVEKKLEAFPLGTE 118


>gi|194248095 epsin 1 isoform b [Homo sapiens]
          Length = 576

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 40  QAYPRDMEKEKTMLVLALLLAKKVASHTPS 69
           QA+P+   +E+  L LAL ++K+ A   PS
Sbjct: 175 QAWPQSSGEEELQLQLALAMSKEEADQPPS 204


>gi|203096856 kinesin family member 7 [Homo sapiens]
          Length = 1343

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 15  LQLRNTSRSEEDRNRDLATALEQLLQAY----PRDMEKEKTMLVLALLL 59
           L L+N     E+ NRD   ALE  ++ Y     R  E+++ M+ L L L
Sbjct: 490 LTLQNQVARLEEENRDFLAALEDAMEQYKLQSDRLREQQEEMVELRLRL 538


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 2   DRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKE 49
           +++I  G V     +LR+  R EE ++RDL   ++ L +     M KE
Sbjct: 691 NKAIEKGEVVSQEAELRHRFRLEEAKSRDLKAEVQALKEKIHELMNKE 738


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,272,390
Number of Sequences: 37866
Number of extensions: 103595
Number of successful extensions: 403
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 390
Number of HSP's gapped (non-prelim): 17
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.