Guide to the Human Genome
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Search of human proteins with 37574042

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|37574042 alanine-glyoxylate aminotransferase 2-like 1
isoform 1 [Homo sapiens]
         (499 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform...  1012   0.0  
gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isofor...   989   0.0  
gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isofor...   890   0.0  
gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo s...   613   e-175
gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Hom...   275   5e-74
gi|4557809 ornithine aminotransferase precursor [Homo sapiens]        127   2e-29
gi|188536080 4-aminobutyrate aminotransferase precursor [Homo sa...    93   5e-19
gi|38679950 4-aminobutyrate aminotransferase precursor [Homo sap...    93   5e-19
gi|38679946 4-aminobutyrate aminotransferase precursor [Homo sap...    93   5e-19
gi|56550043 sarcolemma associated protein [Homo sapiens]               31   3.0  
gi|166064027 cyclin-dependent kinase-like 3 isoform 1 [Homo sapi...    30   6.7  
gi|166064025 cyclin-dependent kinase-like 3 isoform 2 [Homo sapi...    30   6.7  
gi|55741653 hypothetical protein LOC57691 [Homo sapiens]               30   6.7  
gi|31543159 hypothetical protein LOC57020 [Homo sapiens]               30   6.7  

>gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform 1
           [Homo sapiens]
          Length = 499

 Score = 1012 bits (2616), Expect = 0.0
 Identities = 499/499 (100%), Positives = 499/499 (100%)

Query: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVG 60
           MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVG
Sbjct: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVG 60

Query: 61  HCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 120
           HCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL
Sbjct: 61  HCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 120

Query: 121 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 180
           RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE
Sbjct: 121 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 180

Query: 181 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 240
           DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG
Sbjct: 181 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 240

Query: 241 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 300
           GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS
Sbjct: 241 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 300

Query: 301 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 360
           SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI
Sbjct: 301 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 360

Query: 361 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 420
           RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE
Sbjct: 361 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 420

Query: 421 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 480
           DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR
Sbjct: 421 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 480

Query: 481 KRNGMCTDTHSLLSKRLKT 499
           KRNGMCTDTHSLLSKRLKT
Sbjct: 481 KRNGMCTDTHSLLSKRLKT 499


>gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isoform 2
           [Homo sapiens]
          Length = 493

 Score =  989 bits (2557), Expect = 0.0
 Identities = 493/499 (98%), Positives = 493/499 (98%), Gaps = 6/499 (1%)

Query: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVG 60
           MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAH  
Sbjct: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAH-- 58

Query: 61  HCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 120
               GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL
Sbjct: 59  ----GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 114

Query: 121 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 180
           RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE
Sbjct: 115 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 174

Query: 181 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 240
           DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG
Sbjct: 175 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 234

Query: 241 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 300
           GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS
Sbjct: 235 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 294

Query: 301 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 360
           SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI
Sbjct: 295 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 354

Query: 361 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 420
           RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE
Sbjct: 355 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 414

Query: 421 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 480
           DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR
Sbjct: 415 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 474

Query: 481 KRNGMCTDTHSLLSKRLKT 499
           KRNGMCTDTHSLLSKRLKT
Sbjct: 475 KRNGMCTDTHSLLSKRLKT 493


>gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isoform 3
           [Homo sapiens]
          Length = 441

 Score =  890 bits (2299), Expect = 0.0
 Identities = 440/441 (99%), Positives = 441/441 (100%)

Query: 59  VGHCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDL 118
           +GHCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDL
Sbjct: 1   MGHCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDL 60

Query: 119 ALRLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY 178
           ALRLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY
Sbjct: 61  ALRLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY 120

Query: 179 REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHG 238
           REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHG
Sbjct: 121 REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHG 180

Query: 239 AGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEA 298
           AGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEA
Sbjct: 181 AGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEA 240

Query: 299 FSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIG 358
           FSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIG
Sbjct: 241 FSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIG 300

Query: 359 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 418
           DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT
Sbjct: 301 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 360

Query: 419 EEDAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENP 478
           EEDAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENP
Sbjct: 361 EEDAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENP 420

Query: 479 SRKRNGMCTDTHSLLSKRLKT 499
           SRKRNGMCTDTHSLLSKRLKT
Sbjct: 421 SRKRNGMCTDTHSLLSKRLKT 441


>gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo
           sapiens]
          Length = 450

 Score =  613 bits (1581), Expect = e-175
 Identities = 288/432 (66%), Positives = 360/432 (83%), Gaps = 1/432 (0%)

Query: 7   KRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVGHCHPGV 66
           K DTL LR++ I  SC++FF  DP+KIVRAQ QYM+DE G +Y+DCI+NVAHVGHCHP V
Sbjct: 8   KADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLV 67

Query: 67  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 126
           V+AA +Q ++LNTNSR+LHDNIV+YA+RLS TLPE+L V YF NSGSEANDLALRLAR +
Sbjct: 68  VQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHY 127

Query: 127 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 186
            GHQDV+ LDHAYHGHLSSLI+ISPYKF +  D +KE+VHVAP PDTYRG YREDH + A
Sbjct: 128 TGHQDVVVLDHAYHGHLSSLIDISPYKF-RNLDGQKEWVHVAPLPDTYRGPYREDHPNPA 186

Query: 187 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 246
            AYA+EVK+++  A   GRKIAAF AES+ S GGQIIPPAGYF +VAE++  AGGVF+AD
Sbjct: 187 MAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVAD 246

Query: 247 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 306
           E+QVGFGRVGKHFW+FQ+ G+DFVPDIVTMGK +GNGHPVACV  T+ +A AF ++G+EY
Sbjct: 247 EIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEY 306

Query: 307 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 366
           FNT+GG+PVSCAVGLAVL+++E E LQ +A  VG++L +LL +QK KH ++GD+RG+GLF
Sbjct: 307 FNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLF 366

Query: 367 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 426
           IG+DL+KD   RTPAT EA +++ ++KE  VLLS DGP RN+LK KPPMCF+ ++A+ +V
Sbjct: 367 IGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVV 426

Query: 427 DQLDRILTVLEE 438
            +LD ILT +EE
Sbjct: 427 AKLDAILTDMEE 438


>gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Homo
           sapiens]
          Length = 514

 Score =  275 bits (704), Expect = 5e-74
 Identities = 162/449 (36%), Positives = 247/449 (55%), Gaps = 34/449 (7%)

Query: 11  LGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVA--HVGHCHPGVVK 68
           L + K+H+ P    +F   P+ + +   +++FD  G +YLD  + +    VGHCHP V  
Sbjct: 67  LEIHKEHLSPVVTAYFQK-PLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNA 125

Query: 69  AALKQM-ELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQFR 127
            A KQ+  L +T++ F H  + EYA++L+A LPE L V +  NSGSEAN+LA+ +AR   
Sbjct: 126 VAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMARAHS 185

Query: 128 GHQDVITLDHAYHG---HLSSLIEISPYKFQKGKDVKKEFVHVAPT--PDTYRGKYREDH 182
            + D+I+   AYHG   +   L  +  YK +       +     PT  PD +RG +   H
Sbjct: 186 NNIDIISFRGAYHGCSPYTLGLTNVGTYKMELPGGTGCQ-----PTMCPDVFRGPWGGSH 240

Query: 183 A---------------DSASAYADEVKKIIEDAHNS-GRKIAAFIAESMQSCGGQIIPPA 226
                           D   A    +++  +    S  + IA F AE +Q   G +  P 
Sbjct: 241 CRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPK 300

Query: 227 GYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPV 286
           G+ ++  E V   GGV IADEVQ GFGR+G HFW FQ +  D +PDIVTM K +GNG P+
Sbjct: 301 GFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTH--DVLPDIVTMAKGIGNGFPM 358

Query: 287 ACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTEL 346
           A V+TT EIA++ +   +++FNT+GGNP++CA+G AVL++I+ E+LQ N++ VG Y+   
Sbjct: 359 AAVITTPEIAKSLAKC-LQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLK 417

Query: 347 LKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYK-MKEKRVLLSADGPH 405
             K + +  ++GD+RG GL IGI++V+D +   P   E  + I++  K   +L+      
Sbjct: 418 FAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIF 477

Query: 406 RNVLKIKPPMCFTEEDAKFMVDQLDRILT 434
               +I P MC T+ +  F V+     LT
Sbjct: 478 SQTFRIAPSMCITKPEVDFAVEVFRSALT 506


>gi|4557809 ornithine aminotransferase precursor [Homo sapiens]
          Length = 439

 Score =  127 bits (320), Expect = 2e-29
 Identities = 111/424 (26%), Positives = 196/424 (46%), Gaps = 66/424 (15%)

Query: 30  PIKIVRAQRQYMFDENGEQYLDCINNVAHV--GHCHPGVVKAALKQMELLNTNSRFLHDN 87
           P+ + R +  Y++D  G +Y D +++ + V  GHCHP +V A   Q++ L   SR  ++N
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118

Query: 88  IV----EYAKRL---SATLPEKLSVCYFTNSGSEANDLALRLARQF----RGHQD----V 132
           ++    EY  +L      LP         N+G EA + A +LAR++    +G Q     +
Sbjct: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170

Query: 133 ITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSASAYAD- 191
           +     + G   S I  S                    P +Y G            Y D 
Sbjct: 171 VFAAGNFWGRTLSAISSST------------------DPTSYDGFGPFMPGFDIIPYNDL 212

Query: 192 -EVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQV 250
             +++ ++D +     +AAF+ E +Q   G ++P  GY   V E       +FIADE+Q 
Sbjct: 213 PALERALQDPN-----VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT 267

Query: 251 GFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNG-HPVACVVTTKEIAEAFSSSGMEYFNT 309
           G  R G+  W    Y E+  PDIV +GK +  G +PV+ V+   +I         E+ +T
Sbjct: 268 GLARTGR--WLAVDY-ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGST 322

Query: 310 YGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLFIGI 369
           YGGNP+ C V +A L+++E E+L  NA ++G  L   L   K    ++  +RG GL   I
Sbjct: 323 YGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI 380

Query: 370 DLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQL 429
            +      +     +A  +  ++++  +L  A   H ++++  PP+   E++ +  ++ +
Sbjct: 381 VI------KETKDWDAWKVCLRLRDNGLL--AKPTHGDIIRFAPPLVIKEDELRESIEII 432

Query: 430 DRIL 433
           ++ +
Sbjct: 433 NKTI 436


>gi|188536080 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 112/439 (25%), Positives = 180/439 (41%), Gaps = 71/439 (16%)

Query: 40  YMFDENGEQYLDCINNVAHV--GHCHPGVVKAALKQMELLNTNSRFLH---------DNI 88
           Y+ D +G + LD  + ++ V  G+ HP    A LK ++     S F++         +N 
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHP----ALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 89  VEYAKR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LA 123
           VE  ++ L +  P+ +S       GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 124 RQFRGHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY--- 178
            Q  G  D  +++   A+HG     +  +  K     D+      +AP P   R KY   
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLE 256

Query: 179 ---REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEY 235
              +E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ + 
Sbjct: 257 EFVKENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDI 315

Query: 236 VHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEI 295
               G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE 
Sbjct: 316 ARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE- 368

Query: 296 AEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKH 354
            E   ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q    
Sbjct: 369 -EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYP 427

Query: 355 TLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPP 414
             I  +RG G F   D        TP  +    +I   + K V+L   G     ++ +P 
Sbjct: 428 QFISRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPT 477

Query: 415 MCFTEEDAKFMVDQLDRIL 433
           + F +  A   ++    IL
Sbjct: 478 LVFRDHHAHLFLNIFSDIL 496


>gi|38679950 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 112/439 (25%), Positives = 180/439 (41%), Gaps = 71/439 (16%)

Query: 40  YMFDENGEQYLDCINNVAHV--GHCHPGVVKAALKQMELLNTNSRFLH---------DNI 88
           Y+ D +G + LD  + ++ V  G+ HP    A LK ++     S F++         +N 
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHP----ALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 89  VEYAKR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LA 123
           VE  ++ L +  P+ +S       GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 124 RQFRGHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY--- 178
            Q  G  D  +++   A+HG     +  +  K     D+      +AP P   R KY   
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLE 256

Query: 179 ---REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEY 235
              +E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ + 
Sbjct: 257 EFVKENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDI 315

Query: 236 VHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEI 295
               G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE 
Sbjct: 316 ARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE- 368

Query: 296 AEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKH 354
            E   ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q    
Sbjct: 369 -EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYP 427

Query: 355 TLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPP 414
             I  +RG G F   D        TP  +    +I   + K V+L   G     ++ +P 
Sbjct: 428 QFISRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPT 477

Query: 415 MCFTEEDAKFMVDQLDRIL 433
           + F +  A   ++    IL
Sbjct: 478 LVFRDHHAHLFLNIFSDIL 496


>gi|38679946 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 112/439 (25%), Positives = 180/439 (41%), Gaps = 71/439 (16%)

Query: 40  YMFDENGEQYLDCINNVAHV--GHCHPGVVKAALKQMELLNTNSRFLH---------DNI 88
           Y+ D +G + LD  + ++ V  G+ HP    A LK ++     S F++         +N 
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHP----ALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 89  VEYAKR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LA 123
           VE  ++ L +  P+ +S       GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 124 RQFRGHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY--- 178
            Q  G  D  +++   A+HG     +  +  K     D+      +AP P   R KY   
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLE 256

Query: 179 ---REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEY 235
              +E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ + 
Sbjct: 257 EFVKENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDI 315

Query: 236 VHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEI 295
               G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE 
Sbjct: 316 ARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE- 368

Query: 296 AEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKH 354
            E   ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q    
Sbjct: 369 -EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYP 427

Query: 355 TLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPP 414
             I  +RG G F   D        TP  +    +I   + K V+L   G     ++ +P 
Sbjct: 428 QFISRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPT 477

Query: 415 MCFTEEDAKFMVDQLDRIL 433
           + F +  A   ++    IL
Sbjct: 478 LVFRDHHAHLFLNIFSDIL 496


>gi|56550043 sarcolemma associated protein [Homo sapiens]
          Length = 811

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 384 EAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMGTK 443
           E QH I +M+EK   L A      +  ++    FT E            LT L+E + +K
Sbjct: 341 ELQHKIDEMEEKEQELQA-----KIEALQADNDFTNER-----------LTALQEHLLSK 384

Query: 444 TE---SVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHS 491
           +    +   +   C+ K++ E H+    + T  SKEN +R +    +DT S
Sbjct: 385 SGGDCTFIHQFIECQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTLS 435


>gi|166064027 cyclin-dependent kinase-like 3 isoform 1 [Homo
           sapiens]
          Length = 592

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 422 AKFMVDQLDRILT--VLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPS 479
           A   +D  DRI +  +L     T+   +       K K+L+EA +  L      SKEN  
Sbjct: 265 ACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESSKENEL 324

Query: 480 RKRNGMCTDTHSLLS 494
           RK       T++LLS
Sbjct: 325 RKDERKTVYTNTLLS 339


>gi|166064025 cyclin-dependent kinase-like 3 isoform 2 [Homo
           sapiens]
          Length = 455

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 422 AKFMVDQLDRILT--VLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPS 479
           A   +D  DRI +  +L     T+   +       K K+L+EA +  L      SKEN  
Sbjct: 265 ACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESSKENEL 324

Query: 480 RKRNGMCTDTHSLLS 494
           RK       T++LLS
Sbjct: 325 RKDERKTVYTNTLLS 339


>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
          Length = 787

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 10/113 (8%)

Query: 380 PATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDA----------KFMVDQL 429
           PA  EA        E  +   ++GP R VL+    +C  +E+           K    Q 
Sbjct: 14  PAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYYSDILFPKMPKRQG 73

Query: 430 DRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKR 482
           D +  +  + + T TE+       C+    KE H E +     + K + S K+
Sbjct: 74  DFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKPSLSSKK 126


>gi|31543159 hypothetical protein LOC57020 [Homo sapiens]
          Length = 963

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 185 SASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFI 244
           S +  A E +K+++  H+  RK AAF+   +  C   I   AG F ++  Y+H +G V +
Sbjct: 677 SVNRLAMETRKVMKGNHS--RKTAAFVRACVAYCFITIPSLAGIFTRLNLYLH-SGQVAL 733

Query: 245 ADE 247
           A++
Sbjct: 734 ANQ 736


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,006,658
Number of Sequences: 37866
Number of extensions: 832247
Number of successful extensions: 1811
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1784
Number of HSP's gapped (non-prelim): 15
length of query: 499
length of database: 18,247,518
effective HSP length: 106
effective length of query: 393
effective length of database: 14,233,722
effective search space: 5593852746
effective search space used: 5593852746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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