Guide to the Human Genome
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Search of human proteins with 34335190

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34335190 cAMP responsive element modulator isoform e [Homo
sapiens]
         (109 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34335190 cAMP responsive element modulator isoform e [Homo sa...   216   2e-57
gi|34335192 cAMP responsive element modulator isoform f [Homo sa...   207   1e-54
gi|34335202 cAMP responsive element modulator isoform k [Homo sa...   202   4e-53
gi|34335186 cAMP responsive element modulator isoform a [Homo sa...   201   1e-52
gi|34335214 cAMP responsive element modulator isoform o [Homo sa...   201   1e-52
gi|34335210 cAMP responsive element modulator isoform m [Homo sa...   201   1e-52
gi|34335228 cAMP responsive element modulator isoform v [Homo sa...   199   3e-52
gi|34335216 cAMP responsive element modulator isoform p [Homo sa...   199   3e-52
gi|34335212 cAMP responsive element modulator isoform n [Homo sa...   199   3e-52
gi|34335204 cAMP responsive element modulator isoform l [Homo sa...   191   1e-49
gi|34335218 cAMP responsive element modulator isoform q [Homo sa...   191   1e-49
gi|34335194 cAMP responsive element modulator isoform g [Homo sa...   188   9e-49
gi|34335188 cAMP responsive element modulator isoform d [Homo sa...   179   4e-46
gi|34335196 cAMP responsive element modulator isoform h [Homo sa...   174   1e-44
gi|34335200 cAMP responsive element modulator isoform j [Homo sa...   172   5e-44
gi|34335226 cAMP responsive element modulator isoform s [Homo sa...   172   5e-44
gi|34335222 cAMP responsive element modulator isoform u [Homo sa...   172   5e-44
gi|34335224 cAMP responsive element modulator isoform t [Homo sa...   171   1e-43
gi|34335198 cAMP responsive element modulator isoform i [Homo sa...   162   4e-41
gi|34335220 cAMP responsive element modulator isoform r [Homo sa...   162   4e-41
gi|4758054 cAMP responsive element binding protein 1 isoform A [...   129   5e-31
gi|19745184 cAMP responsive element binding protein 1 isoform B ...   129   5e-31
gi|4885073 activating transcription factor 1 [Homo sapiens]           115   6e-27
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho...    55   1e-08
gi|18702325 cAMP responsive element binding protein 3-like 4 [Ho...    54   2e-08
gi|209954788 activating transcription factor 6 beta isoform b [H...    50   4e-07
gi|20631977 activating transcription factor 6 beta isoform a [Ho...    50   4e-07
gi|56786157 activating transcription factor 6 [Homo sapiens]           46   7e-06
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho...    44   2e-05
gi|22219462 cAMP responsive element binding protein 3 [Homo sapi...    44   2e-05

>gi|34335190 cAMP responsive element modulator isoform e [Homo
           sapiens]
          Length = 109

 Score =  216 bits (551), Expect = 2e-57
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 1   MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 60
           MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
Sbjct: 1   MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 60

Query: 61  REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 61  REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109


>gi|34335192 cAMP responsive element modulator isoform f [Homo
           sapiens]
          Length = 121

 Score =  207 bits (528), Expect = 1e-54
 Identities = 109/121 (90%), Positives = 109/121 (90%), Gaps = 12/121 (9%)

Query: 1   MAVTGDDT------------AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 48
           MAVTGDDT            AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE
Sbjct: 1   MAVTGDDTDEETELAPSHMAAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 60

Query: 49  ATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           ATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD
Sbjct: 61  ATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 120

Query: 109 Y 109
           Y
Sbjct: 121 Y 121


>gi|34335202 cAMP responsive element modulator isoform k [Homo
           sapiens]
          Length = 113

 Score =  202 bits (515), Expect = 4e-53
 Identities = 102/107 (95%), Positives = 105/107 (98%)

Query: 3   VTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE 62
           ++G  +AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE
Sbjct: 7   LSGQLSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE 66

Query: 63  AAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           AAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 67  AAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 113


>gi|34335186 cAMP responsive element modulator isoform a [Homo
           sapiens]
          Length = 300

 Score =  201 bits (510), Expect = 1e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR
Sbjct: 200 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 259

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 260 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 300


>gi|34335214 cAMP responsive element modulator isoform o [Homo
           sapiens]
          Length = 270

 Score =  201 bits (510), Expect = 1e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR
Sbjct: 170 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 229

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 230 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 270


>gi|34335210 cAMP responsive element modulator isoform m [Homo
           sapiens]
          Length = 245

 Score =  201 bits (510), Expect = 1e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR
Sbjct: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245


>gi|34335228 cAMP responsive element modulator isoform v [Homo
           sapiens]
          Length = 221

 Score =  199 bits (507), Expect = 3e-52
 Identities = 103/106 (97%), Positives = 103/106 (97%), Gaps = 1/106 (0%)

Query: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 117 TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 175

Query: 64  AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 176 AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 221


>gi|34335216 cAMP responsive element modulator isoform p [Homo
           sapiens]
          Length = 207

 Score =  199 bits (507), Expect = 3e-52
 Identities = 103/106 (97%), Positives = 103/106 (97%), Gaps = 1/106 (0%)

Query: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 103 TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 161

Query: 64  AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 162 AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 207


>gi|34335212 cAMP responsive element modulator isoform n [Homo
           sapiens]
          Length = 182

 Score =  199 bits (507), Expect = 3e-52
 Identities = 103/106 (97%), Positives = 103/106 (97%), Gaps = 1/106 (0%)

Query: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 78  TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 136

Query: 64  AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 137 AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 182


>gi|34335204 cAMP responsive element modulator isoform l [Homo
           sapiens]
          Length = 96

 Score =  191 bits (485), Expect = 1e-49
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 14  MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 96


>gi|34335218 cAMP responsive element modulator isoform q [Homo
           sapiens]
          Length = 96

 Score =  191 bits (485), Expect = 1e-49
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 14  MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109
           YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 96


>gi|34335194 cAMP responsive element modulator isoform g [Homo
           sapiens]
          Length = 108

 Score =  188 bits (477), Expect = 9e-49
 Identities = 95/108 (87%), Positives = 101/108 (93%)

Query: 1   MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 60
           MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
Sbjct: 1   MAVTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 60

Query: 61  REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           REAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 108


>gi|34335188 cAMP responsive element modulator isoform d [Homo
           sapiens]
          Length = 120

 Score =  179 bits (454), Expect = 4e-46
 Identities = 95/120 (79%), Positives = 101/120 (84%), Gaps = 12/120 (10%)

Query: 1   MAVTGDDT------------AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 48
           MAVTGDDT            AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE
Sbjct: 1   MAVTGDDTDEETELAPSHMAAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 60

Query: 49  ATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           ATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  ATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 120


>gi|34335196 cAMP responsive element modulator isoform h [Homo
           sapiens]
          Length = 112

 Score =  174 bits (441), Expect = 1e-44
 Identities = 88/106 (83%), Positives = 97/106 (91%)

Query: 3   VTGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE 62
           ++G  +AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE
Sbjct: 7   LSGQLSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNRE 66

Query: 63  AAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           AA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 67  AARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 112


>gi|34335200 cAMP responsive element modulator isoform j [Homo
           sapiens]
          Length = 102

 Score =  172 bits (436), Expect = 5e-44
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 3   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 62

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 63  RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 102


>gi|34335226 cAMP responsive element modulator isoform s [Homo
           sapiens]
          Length = 248

 Score =  172 bits (436), Expect = 5e-44
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 149 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 208

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 209 RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 248


>gi|34335222 cAMP responsive element modulator isoform u [Homo
           sapiens]
          Length = 299

 Score =  172 bits (436), Expect = 5e-44
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 200 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 259

Query: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 260 RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 299


>gi|34335224 cAMP responsive element modulator isoform t [Homo
           sapiens]
          Length = 236

 Score =  171 bits (433), Expect = 1e-43
 Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)

Query: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 133 TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 191

Query: 64  AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           A+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 192 ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236


>gi|34335198 cAMP responsive element modulator isoform i [Homo
           sapiens]
          Length = 95

 Score =  162 bits (411), Expect = 4e-41
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 14  MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|34335220 cAMP responsive element modulator isoform r [Homo
           sapiens]
          Length = 95

 Score =  162 bits (411), Expect = 4e-41
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 14  MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|4758054 cAMP responsive element binding protein 1 isoform A
           [Homo sapiens]
          Length = 327

 Score =  129 bits (324), Expect = 5e-31
 Identities = 70/101 (69%), Positives = 82/101 (81%), Gaps = 4/101 (3%)

Query: 9   AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKEC 67
           AA+GD+ TYQIR APT+ +  GVVMA+SP     P Q AEEA RKRE+RLMKNREAA+EC
Sbjct: 230 AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAREC 286

Query: 68  RRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           RR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K+D
Sbjct: 287 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 327



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 10  ATGDMPTYQ-IRAPTAALPQ--GVVMAASPGSLHSPQ-------QLAEEATRKRELRLMK 59
           AT   PT   ++ P     Q  GV+ AA P  + SPQ        +AE    +  +  + 
Sbjct: 46  ATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQISTIAESEDSQESVDSVT 105

Query: 60  NREAAKECRRRKKEYVKCL 78
           + +  +E   R+  Y K L
Sbjct: 106 DSQKRREILSRRPSYRKIL 124


>gi|19745184 cAMP responsive element binding protein 1 isoform B
           [Homo sapiens]
          Length = 341

 Score =  129 bits (324), Expect = 5e-31
 Identities = 70/101 (69%), Positives = 82/101 (81%), Gaps = 4/101 (3%)

Query: 9   AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKEC 67
           AA+GD+ TYQIR APT+ +  GVVMA+SP     P Q AEEA RKRE+RLMKNREAA+EC
Sbjct: 244 AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAREC 300

Query: 68  RRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
           RR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K+D
Sbjct: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341


>gi|4885073 activating transcription factor 1 [Homo sapiens]
          Length = 271

 Score =  115 bits (289), Expect = 6e-27
 Identities = 65/100 (65%), Positives = 77/100 (77%), Gaps = 3/100 (3%)

Query: 10  ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKEC 67
           A+GDM TYQIR   +A  LPQ VVM  SP +L S     ++   KRE+RLMKNREAA+EC
Sbjct: 172 ASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAAREC 230

Query: 68  RRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 107
           RR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 231 RRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270


>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
           sapiens]
          Length = 519

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 27/60 (45%), Positives = 41/60 (68%)

Query: 42  PQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKD 101
           P   AEE   KR  R +KN+ +A+E RR+KKEYV+CLE +V     +N +L +++ETL++
Sbjct: 282 PLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLEN 341


>gi|18702325 cAMP responsive element binding protein 3-like 4 [Homo
           sapiens]
          Length = 395

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 26/61 (42%), Positives = 42/61 (68%)

Query: 40  HSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETL 99
           H P   AEE   K+  R ++N+++A++ RRRKKEY+  LESRVA    QN++L ++++ L
Sbjct: 207 HLPLTKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQEL 266

Query: 100 K 100
           +
Sbjct: 267 E 267


>gi|209954788 activating transcription factor 6 beta isoform b [Homo
           sapiens]
          Length = 700

 Score = 50.1 bits (118), Expect = 4e-07
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 18  QIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           Q   P  +LP+     +V A  PG+   P+   +    KR+ R++KNRE+A + RR+KKE
Sbjct: 288 QPEGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAKLLKRQQRMIKNRESACQSRRKKKE 345

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLK 100
           Y++ LE+R+  +   N++L  E   L+
Sbjct: 346 YLQGLEARLQAVLADNQQLRRENAALR 372


>gi|20631977 activating transcription factor 6 beta isoform a [Homo
           sapiens]
          Length = 703

 Score = 50.1 bits (118), Expect = 4e-07
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 18  QIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 73
           Q   P  +LP+     +V A  PG+   P+   +    KR+ R++KNRE+A + RR+KKE
Sbjct: 291 QPEGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAKLLKRQQRMIKNRESACQSRRKKKE 348

Query: 74  YVKCLESRVAVLEVQNKKLIEELETLK 100
           Y++ LE+R+  +   N++L  E   L+
Sbjct: 349 YLQGLEARLQAVLADNQQLRRENAALR 375


>gi|56786157 activating transcription factor 6 [Homo sapiens]
          Length = 670

 Score = 45.8 bits (107), Expect = 7e-06
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 19  IRAPTAALPQGVVMAASPGSLHSPQQL--AEEATRKRELRLMKNREAAKECRRRKKEYVK 76
           + AP+A  P    ++ +   L S  +   ++ A  +R+ R++KNRE+A + R++KKEY+ 
Sbjct: 273 VPAPSANSPVNGKLSVTKPVLQSTMRNVGSDIAVLRRQQRMIKNRESACQSRKKKKEYML 332

Query: 77  CLESRVAVLEVQNKKLIEELETLK 100
            LE+R+     +N++L +E  TLK
Sbjct: 333 GLEARLKAALSENEQLKKENGTLK 356


>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
           sapiens]
          Length = 520

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 22/60 (36%), Positives = 38/60 (63%)

Query: 42  PQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKD 101
           P   +EE   K+  R +KN+ +A+E RR+KKEY+  LE +V     +N +L +++E L++
Sbjct: 286 PLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLEN 345


>gi|22219462 cAMP responsive element binding protein 3 [Homo
           sapiens]
          Length = 371

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 42  PQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKD 101
           P    EE   KR  R ++N+ +A+E RR+KK YV  LESRV     QN +L  +++ L++
Sbjct: 142 PLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEE 201


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.127    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,226,108
Number of Sequences: 37866
Number of extensions: 165384
Number of successful extensions: 1163
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 931
Number of HSP's gapped (non-prelim): 299
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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