Guide to the Human Genome
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Search of human proteins with 33457301

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33457301 glycerophosphodiester phosphodiesterase domain
containing 4 [Homo sapiens]
         (520 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33457301 glycerophosphodiester phosphodiesterase domain conta...  1071   0.0  
gi|189571657 glycerophosphodiester phosphodiesterase domain cont...   361   e-100
gi|21361649 osteoblast differentiation promoting factor protein ...   323   2e-88
gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]    53   8e-07
gi|32698962 glycerophosphodiester phosphodiesterase domain conta...    48   2e-05
gi|25901062 hypothetical protein LOC56261 [Homo sapiens]               42   0.001
gi|12965180 taste receptor, type 2, member 10 [Homo sapiens]           38   0.026
gi|17986270 dopamine receptor D2 isoform short [Homo sapiens]          33   0.82 
gi|4503385 dopamine receptor D2 isoform long [Homo sapiens]            33   0.82 
gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo s...    32   1.8  
gi|146198640 glycerophosphodiester phosphodiesterase domain cont...    31   3.1  
gi|157388953 G protein-coupled receptor 172B [Homo sapiens]            30   4.1  
gi|157388951 G protein-coupled receptor 172B [Homo sapiens]            30   4.1  
gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla...    30   5.3  
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]            30   7.0  
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]            30   7.0  
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]            30   7.0  
gi|190194429 zinc finger protein 267 [Homo sapiens]                    30   7.0  
gi|28882035 taste receptor, type 2, member 19 [Homo sapiens]           29   9.1  
gi|12232393 major facilitator superfamily domain containing 1 [H...    29   9.1  

>gi|33457301 glycerophosphodiester phosphodiesterase domain
           containing 4 [Homo sapiens]
          Length = 520

 Score = 1071 bits (2769), Expect = 0.0
 Identities = 520/520 (100%), Positives = 520/520 (100%)

Query: 1   MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI 60
           MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI
Sbjct: 1   MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI 60

Query: 61  ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF 120
           ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF
Sbjct: 61  ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF 120

Query: 121 WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180
           WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP
Sbjct: 121 WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180

Query: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240
           LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV
Sbjct: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240

Query: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300
           PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE
Sbjct: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300

Query: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360
           ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ
Sbjct: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360

Query: 361 HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN 420
           HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN
Sbjct: 361 HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN 420

Query: 421 IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV 480
           IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV
Sbjct: 421 IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV 480

Query: 481 LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR 520
           LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR
Sbjct: 481 LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR 520


>gi|189571657 glycerophosphodiester phosphodiesterase domain
           containing 5 [Homo sapiens]
          Length = 605

 Score =  361 bits (927), Expect = e-100
 Identities = 199/522 (38%), Positives = 291/522 (55%), Gaps = 35/522 (6%)

Query: 3   LFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIEL 62
           L+ W E  ++Y  F+W  +   GYW  W + IL       AY + LL+L    +    ++
Sbjct: 59  LYFWWEVHNDYDEFNWYLYNRMGYWSDWPVPILVTTAAAFAYIAGLLVLALCHIAVGQQM 118

Query: 63  YLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWP 122
            LH  HKI +++++   V+ M  + + W++ W V  +S+Q  AP++H+ ++  + +L W 
Sbjct: 119 NLHWLHKIGLVVILASTVVAMSAVAQLWEDEWEVLLISLQGTAPFLHVGAVAAVTMLSWI 178

Query: 123 VAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMPLG 182
           VA   A  ER                             QV +   F  ++  LYL PL 
Sbjct: 179 VAGQFARAER--------------------------TSSQVTILCTFFTVVFALYLAPLT 212

Query: 183 IYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPF 242
           I SPCI EK++LGPKP + GHRGAPML PE+T+MSF KA+E   +GL+ DI +S D VPF
Sbjct: 213 ISSPCIMEKKDLGPKPALIGHRGAPMLAPEHTLMSFRKALEQKLYGLQADITISLDGVPF 272

Query: 243 LMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEAD 302
           LMHD  L+RTTN+ E  PE A    +  NW  L  LNAG+WF+K +  PF+    LS +D
Sbjct: 273 LMHDTTLRRTTNVEEEFPELARRPASMLNWTTLQRLNAGQWFLKTD--PFWTASSLSPSD 330

Query: 303 KERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQHL 362
              A+NQSI +LA+LL LA K    ++ +L  PP +HP R +F+   +  +L S   QH 
Sbjct: 331 HREAQNQSICSLAELLELA-KGNATLLLNLRDPPREHPYRSSFINVTLEAVLHSGFPQHQ 389

Query: 363 IFWLPAHDRQYVRSVAPGFQHV-GRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANI 421
           + WLP+  R  VR VAPGFQ   G   ++ +L + +I  +N+ Y ++    LRDY + N+
Sbjct: 390 VMWLPSRQRPLVRKVAPGFQQTSGSKEAVASLRRGHIQRLNLRYTQVSRQELRDYASWNL 449

Query: 422 HINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVL 481
            +N+YTVN PWLFSL WC+ + SVT+DN   LSQ+  P + M P  Y  MW+ AD++S  
Sbjct: 450 SVNLYTVNAPWLFSLLWCAGVPSVTSDNSHALSQVPSPLWIMPPDEYCLMWVTADLVSFT 509

Query: 482 FIVAIFCFH-WR----RETEKEKLFETSSTRTDTQSGSKNEE 518
            IV IF    WR    R    E++  +++ R  ++  S  +E
Sbjct: 510 LIVGIFVLQKWRLGGIRSYNPEQIMLSAAVRRTSRDVSIMKE 551


>gi|21361649 osteoblast differentiation promoting factor protein
           [Homo sapiens]
          Length = 539

 Score =  323 bits (829), Expect = 2e-88
 Identities = 181/493 (36%), Positives = 276/493 (55%), Gaps = 36/493 (7%)

Query: 3   LFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIEL 62
           L++ +   ++  NF+   F   G+W  WS+  L +  +L  Y+SLLL+L  LL   R  L
Sbjct: 55  LYIGLVLLNDLHNFNEFLFRRWGHWMDWSLAFLLVISLLVTYASLLLVLALLLRLCRQPL 114

Query: 63  YLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWP 122
           +LH  HK+L+LL++LL    +  +   W++ W    +S+Q  AP++H+ +   + +L WP
Sbjct: 115 HLHSLHKVLLLLIMLLVAAGLVGLDIQWQQEWHSLRVSLQATAPFLHIGAAAGIALLAWP 174

Query: 123 VA--FYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180
           VA  FY        R+ R                    RG ++ + L F  ++L +YL P
Sbjct: 175 VADTFY--------RIHR--------------------RGPKILLLLLFFGVVLVIYLAP 206

Query: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240
           L I SPCI E  +L PKP + GHRGAPML PENT+MS  K  E GA   ETD+ +S D V
Sbjct: 207 LCISSPCIMEPRDLPPKPGLVGHRGAPMLAPENTLMSLRKTAECGATVFETDVMVSSDGV 266

Query: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300
           PFLMHD  L RTTN+  V P     + + F+W  L  LNAG WF+  E RPF+  KPL+ 
Sbjct: 267 PFLMHDEHLSRTTNVASVFPTRITAHSSDFSWTELKRLNAGSWFL--ERRPFWGAKPLAG 324

Query: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360
            D++ A +Q++P L +LL  A      ++FDL RPP  H    TFV Q +  +L +++ Q
Sbjct: 325 PDQKEAESQTVPALEELLEEAAALNLSIMFDLRRPPQNHTYYDTFVIQTLETVLNARVPQ 384

Query: 361 HLIFWLPAHDRQYVRSVAPGFQHV-GRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAA 419
            ++FWLP  DR  V+  APG + + GR     T        +N+ Y+ L    ++     
Sbjct: 385 AMVFWLPDEDRANVQRRAPGMRQIYGRQGGNRT---ERPQFLNLPYQDLPLLDIKALHKD 441

Query: 420 NIHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIIS 479
           N+ +N++ VN+PWLFSL WC+ ++SVTT++  LL Q+ +P + +TP+ Y+ +W++ + +S
Sbjct: 442 NVSVNLFVVNKPWLFSLLWCAGVDSVTTNDCQLLQQMRYPIWLITPQTYLIIWVITNCVS 501

Query: 480 VLFIVAIFCFHWR 492
            + ++  F    R
Sbjct: 502 TMLLLWTFLLQRR 514


>gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]
          Length = 331

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 172 ILLGLYLMPLGIYS----PCIQEKENLGPKPTI--FGHRGAPMLGPENTMMSFEKAVEHG 225
           +L G   + L ++S    P  +  + L P+  I    HRG     PENT+ +  +A ++G
Sbjct: 33  LLTGSLFVLLRVFSFEPVPSCRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNG 92

Query: 226 AHGLETDIHLSYDHVPFLMHDFDLKRTTN 254
           A G+E DI  + D +P LMHD  + RTT+
Sbjct: 93  ATGVELDIEFTSDGIPVLMHDNTVDRTTD 121


>gi|32698962 glycerophosphodiester phosphodiesterase domain
           containing 1 [Homo sapiens]
          Length = 314

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 169 FLLILLGLYLMPLGI---YSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHG 225
           +LL  LG YL+   +   Y   + +++          HRG      ENTM +F+ AV+ G
Sbjct: 8   YLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVKIG 67

Query: 226 AHGLETDIHLSYDHVPFLMHDFDLKRTTNIG-EVQPESACENPAF 269
              LE D H++ D    + HD +LKR T +   +     CE P +
Sbjct: 68  TDTLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPY 112


>gi|25901062 hypothetical protein LOC56261 [Homo sapiens]
          Length = 672

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 176 LYLMPLGIYSPCIQEKENLGPKPTI---FGHRGAPMLGP--------ENTMMSFEKAVEH 224
           + + PL  YS  ++   +   KP I    GHRGA             ENT+ S   A  H
Sbjct: 293 IIIKPLPGYSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASH 352

Query: 225 GAHGLETDIHLSYDHVPFLMHD 246
           GA  +E D+HLS D VP + HD
Sbjct: 353 GAAFVEFDVHLSKDFVPVVYHD 374


>gi|12965180 taste receptor, type 2, member 10 [Homo sapiens]
          Length = 307

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 10/183 (5%)

Query: 12  EYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKIL 71
           EY ++ WV    +  WF  S+ I    +I   +S+ +    FL L  R  + L      L
Sbjct: 82  EYISYFWVIGNQSSMWFATSLSIFYFLKIAN-FSNYI----FLWLKSRTNMVLPFMIVFL 136

Query: 72  ILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLE 131
           ++  +L    +  I+  +  +   V  L+M     ++  + + + VI F+ ++  + C+ 
Sbjct: 137 LISSLLNFAYIAKILNDYKTKNDTVWDLNMYKSEYFIKQILLNLGVIFFFTLSL-ITCIF 195

Query: 132 REVRMRRY-RMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMPLGIYSPCIQE 190
             + + R+ R   S    L+  N    ++ ++V +     +IL  LY + + I   C   
Sbjct: 196 LIISLWRHNRQMQSNVTGLRDSNTEAHVKAMKVLIS---FIILFILYFIGMAIEISCFTV 252

Query: 191 KEN 193
           +EN
Sbjct: 253 REN 255


>gi|17986270 dopamine receptor D2 isoform short [Homo sapiens]
          Length = 414

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 13/60 (21%), Positives = 29/60 (48%)

Query: 70  ILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVAC 129
           I + L +++C   +  +C    +R+    + M     Y     +TVM+ + W ++F ++C
Sbjct: 109 IFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISC 168


>gi|4503385 dopamine receptor D2 isoform long [Homo sapiens]
          Length = 443

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 13/60 (21%), Positives = 29/60 (48%)

Query: 70  ILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVAC 129
           I + L +++C   +  +C    +R+    + M     Y     +TVM+ + W ++F ++C
Sbjct: 109 IFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISC 168


>gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo
           sapiens]
          Length = 1617

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 12/79 (15%)

Query: 24  TGYWFFWS------IFILSL-ARILTAYSSLLLLLGFLLLWERIELY-LHLCHKILILLV 75
           + +W  W       IFI+S+   I+  ++ ++++ GF++++    LY L L   + ++ V
Sbjct: 261 SAFWLSWGLIYAGFIFIISIFVTIIITFTQIIVMTGFMVIFILFFLYGLSLVALVFLMSV 320

Query: 76  IL----LCVILMFIICKFW 90
           +L    L  +++F++  FW
Sbjct: 321 LLKKAVLTNLVVFLLTLFW 339


>gi|146198640 glycerophosphodiester phosphodiesterase domain
           containing 3 [Homo sapiens]
          Length = 318

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 203 HRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFDLKRTTNI 255
           HRG      ENTM + E ++   +  LE D  L+ D V  + HD +L R + +
Sbjct: 44  HRGGSGELLENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGL 96


>gi|157388953 G protein-coupled receptor 172B [Homo sapiens]
          Length = 448

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/29 (55%), Positives = 17/29 (58%)

Query: 159 RGLQVPVGLPFLLILLGLYLMPLGIYSPC 187
           R L   VGL  L +L G YLM L I SPC
Sbjct: 337 RSLAGLVGLSLLGMLFGAYLMALAILSPC 365


>gi|157388951 G protein-coupled receptor 172B [Homo sapiens]
          Length = 448

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/29 (55%), Positives = 17/29 (58%)

Query: 159 RGLQVPVGLPFLLILLGLYLMPLGIYSPC 187
           R L   VGL  L +L G YLM L I SPC
Sbjct: 337 RSLAGLVGLSLLGMLFGAYLMALAILSPC 365


>gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class
           U [Homo sapiens]
          Length = 435

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 13/118 (11%)

Query: 26  YWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKILILLVILLCVILMFI 85
           ++ F  I ++++ +       + L + F  +W    LY  L +  ++  +I++C +L  +
Sbjct: 314 FFMFIQIAVIAIFKSYPTVGDVALYMAFFPVWNH--LYRFLRNIFVLTCIIIVCSLLFPV 371

Query: 86  ICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTH 143
           +   W   W+ AG +   F  Y   ++  V  IL     FY A L RE     Y +TH
Sbjct: 372 L---W-HLWIYAGSANSNFF-YAITLTFNVGQILLISDYFY-AFLRRE-----YYLTH 418


>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231
           PL    PC    E++ P   P  FG  G P   P+  + S E+   H G HG++T
Sbjct: 71  PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121


>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231
           PL    PC    E++ P   P  FG  G P   P+  + S E+   H G HG++T
Sbjct: 71  PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121


>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231
           PL    PC    E++ P   P  FG  G P   P+  + S E+   H G HG++T
Sbjct: 71  PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121


>gi|190194429 zinc finger protein 267 [Homo sapiens]
          Length = 743

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 19/102 (18%)

Query: 188 IQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAV--EHGAHGLETDIHL---------- 235
           ++ +E +  +P +F H    +L    T  SF+K +   HG+  LE ++HL          
Sbjct: 65  VKSEETVAIQPDVFSHYNKDLLTEHCTEASFQKVISRRHGSCDLE-NLHLRKRWKREECE 123

Query: 236 ----SYDHVPFLMHDFDLKRTTNIGEVQPESACENPAFFNWD 273
                YD   F    FD     ++   Q  S+C     +N+D
Sbjct: 124 GHNGCYDEKTFKYDQFDESSVESLFHQQILSSCAKS--YNFD 163


>gi|28882035 taste receptor, type 2, member 19 [Homo sapiens]
          Length = 299

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 1   MLLFLWIET--SSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWE 58
           ++LFLW  T  +S  +  + V  + +  W   + F + LA  L+ +  LL +  F  L  
Sbjct: 61  VMLFLWYATVFNSALYGLE-VRIVASNAWAVTNHFSMWLAASLSIFC-LLKIANFSNL-- 116

Query: 59  RIELYLHLCHKILILLVILLCVILMFIIC 87
              + LHL  +I  +++++L   L+F+IC
Sbjct: 117 ---ISLHLKKRIKSVVLVILLGPLVFLIC 142


>gi|12232393 major facilitator superfamily domain containing 1 [Homo
           sapiens]
          Length = 465

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 22  LGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKILILLVILLCVI 81
           LGT Y F  SI  L LA I      +L   G+L L    E++   C  + +L V+LL ++
Sbjct: 386 LGTAYGFMQSIQNLGLAIISIIAGMILDSRGYLFL----EVFFIACVSLSLLSVVLLYLV 441


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.142    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,702,775
Number of Sequences: 37866
Number of extensions: 861938
Number of successful extensions: 2792
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2771
Number of HSP's gapped (non-prelim): 23
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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