BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|33457301 glycerophosphodiester phosphodiesterase domain containing 4 [Homo sapiens] (520 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|33457301 glycerophosphodiester phosphodiesterase domain conta... 1071 0.0 gi|189571657 glycerophosphodiester phosphodiesterase domain cont... 361 e-100 gi|21361649 osteoblast differentiation promoting factor protein ... 323 2e-88 gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens] 53 8e-07 gi|32698962 glycerophosphodiester phosphodiesterase domain conta... 48 2e-05 gi|25901062 hypothetical protein LOC56261 [Homo sapiens] 42 0.001 gi|12965180 taste receptor, type 2, member 10 [Homo sapiens] 38 0.026 gi|17986270 dopamine receptor D2 isoform short [Homo sapiens] 33 0.82 gi|4503385 dopamine receptor D2 isoform long [Homo sapiens] 33 0.82 gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo s... 32 1.8 gi|146198640 glycerophosphodiester phosphodiesterase domain cont... 31 3.1 gi|157388953 G protein-coupled receptor 172B [Homo sapiens] 30 4.1 gi|157388951 G protein-coupled receptor 172B [Homo sapiens] 30 4.1 gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla... 30 5.3 gi|169184025 PREDICTED: hypothetical protein [Homo sapiens] 30 7.0 gi|169179740 PREDICTED: hypothetical protein [Homo sapiens] 30 7.0 gi|169180137 PREDICTED: hypothetical protein [Homo sapiens] 30 7.0 gi|190194429 zinc finger protein 267 [Homo sapiens] 30 7.0 gi|28882035 taste receptor, type 2, member 19 [Homo sapiens] 29 9.1 gi|12232393 major facilitator superfamily domain containing 1 [H... 29 9.1 >gi|33457301 glycerophosphodiester phosphodiesterase domain containing 4 [Homo sapiens] Length = 520 Score = 1071 bits (2769), Expect = 0.0 Identities = 520/520 (100%), Positives = 520/520 (100%) Query: 1 MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI 60 MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI Sbjct: 1 MLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERI 60 Query: 61 ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF 120 ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF Sbjct: 61 ELYLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILF 120 Query: 121 WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180 WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP Sbjct: 121 WPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180 Query: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV Sbjct: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240 Query: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE Sbjct: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300 Query: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ Sbjct: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360 Query: 361 HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN 420 HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN Sbjct: 361 HLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAAN 420 Query: 421 IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV 480 IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV Sbjct: 421 IHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISV 480 Query: 481 LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR 520 LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR Sbjct: 481 LFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEEDR 520 >gi|189571657 glycerophosphodiester phosphodiesterase domain containing 5 [Homo sapiens] Length = 605 Score = 361 bits (927), Expect = e-100 Identities = 199/522 (38%), Positives = 291/522 (55%), Gaps = 35/522 (6%) Query: 3 LFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIEL 62 L+ W E ++Y F+W + GYW W + IL AY + LL+L + ++ Sbjct: 59 LYFWWEVHNDYDEFNWYLYNRMGYWSDWPVPILVTTAAAFAYIAGLLVLALCHIAVGQQM 118 Query: 63 YLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWP 122 LH HKI +++++ V+ M + + W++ W V +S+Q AP++H+ ++ + +L W Sbjct: 119 NLHWLHKIGLVVILASTVVAMSAVAQLWEDEWEVLLISLQGTAPFLHVGAVAAVTMLSWI 178 Query: 123 VAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMPLG 182 VA A ER QV + F ++ LYL PL Sbjct: 179 VAGQFARAER--------------------------TSSQVTILCTFFTVVFALYLAPLT 212 Query: 183 IYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPF 242 I SPCI EK++LGPKP + GHRGAPML PE+T+MSF KA+E +GL+ DI +S D VPF Sbjct: 213 ISSPCIMEKKDLGPKPALIGHRGAPMLAPEHTLMSFRKALEQKLYGLQADITISLDGVPF 272 Query: 243 LMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEAD 302 LMHD L+RTTN+ E PE A + NW L LNAG+WF+K + PF+ LS +D Sbjct: 273 LMHDTTLRRTTNVEEEFPELARRPASMLNWTTLQRLNAGQWFLKTD--PFWTASSLSPSD 330 Query: 303 KERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQHL 362 A+NQSI +LA+LL LA K ++ +L PP +HP R +F+ + +L S QH Sbjct: 331 HREAQNQSICSLAELLELA-KGNATLLLNLRDPPREHPYRSSFINVTLEAVLHSGFPQHQ 389 Query: 363 IFWLPAHDRQYVRSVAPGFQHV-GRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANI 421 + WLP+ R VR VAPGFQ G ++ +L + +I +N+ Y ++ LRDY + N+ Sbjct: 390 VMWLPSRQRPLVRKVAPGFQQTSGSKEAVASLRRGHIQRLNLRYTQVSRQELRDYASWNL 449 Query: 422 HINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVL 481 +N+YTVN PWLFSL WC+ + SVT+DN LSQ+ P + M P Y MW+ AD++S Sbjct: 450 SVNLYTVNAPWLFSLLWCAGVPSVTSDNSHALSQVPSPLWIMPPDEYCLMWVTADLVSFT 509 Query: 482 FIVAIFCFH-WR----RETEKEKLFETSSTRTDTQSGSKNEE 518 IV IF WR R E++ +++ R ++ S +E Sbjct: 510 LIVGIFVLQKWRLGGIRSYNPEQIMLSAAVRRTSRDVSIMKE 551 >gi|21361649 osteoblast differentiation promoting factor protein [Homo sapiens] Length = 539 Score = 323 bits (829), Expect = 2e-88 Identities = 181/493 (36%), Positives = 276/493 (55%), Gaps = 36/493 (7%) Query: 3 LFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIEL 62 L++ + ++ NF+ F G+W WS+ L + +L Y+SLLL+L LL R L Sbjct: 55 LYIGLVLLNDLHNFNEFLFRRWGHWMDWSLAFLLVISLLVTYASLLLVLALLLRLCRQPL 114 Query: 63 YLHLCHKILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWP 122 +LH HK+L+LL++LL + + W++ W +S+Q AP++H+ + + +L WP Sbjct: 115 HLHSLHKVLLLLIMLLVAAGLVGLDIQWQQEWHSLRVSLQATAPFLHIGAAAGIALLAWP 174 Query: 123 VA--FYVACLEREVRMRRYRMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMP 180 VA FY R+ R RG ++ + L F ++L +YL P Sbjct: 175 VADTFY--------RIHR--------------------RGPKILLLLLFFGVVLVIYLAP 206 Query: 181 LGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHV 240 L I SPCI E +L PKP + GHRGAPML PENT+MS K E GA ETD+ +S D V Sbjct: 207 LCISSPCIMEPRDLPPKPGLVGHRGAPMLAPENTLMSLRKTAECGATVFETDVMVSSDGV 266 Query: 241 PFLMHDFDLKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSE 300 PFLMHD L RTTN+ V P + + F+W L LNAG WF+ E RPF+ KPL+ Sbjct: 267 PFLMHDEHLSRTTNVASVFPTRITAHSSDFSWTELKRLNAGSWFL--ERRPFWGAKPLAG 324 Query: 301 ADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPKHPLRHTFVRQVVSVILASKIEQ 360 D++ A +Q++P L +LL A ++FDL RPP H TFV Q + +L +++ Q Sbjct: 325 PDQKEAESQTVPALEELLEEAAALNLSIMFDLRRPPQNHTYYDTFVIQTLETVLNARVPQ 384 Query: 361 HLIFWLPAHDRQYVRSVAPGFQHV-GRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAA 419 ++FWLP DR V+ APG + + GR T +N+ Y+ L ++ Sbjct: 385 AMVFWLPDEDRANVQRRAPGMRQIYGRQGGNRT---ERPQFLNLPYQDLPLLDIKALHKD 441 Query: 420 NIHINVYTVNEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIIS 479 N+ +N++ VN+PWLFSL WC+ ++SVTT++ LL Q+ +P + +TP+ Y+ +W++ + +S Sbjct: 442 NVSVNLFVVNKPWLFSLLWCAGVDSVTTNDCQLLQQMRYPIWLITPQTYLIIWVITNCVS 501 Query: 480 VLFIVAIFCFHWR 492 + ++ F R Sbjct: 502 TMLLLWTFLLQRR 514 >gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens] Length = 331 Score = 52.8 bits (125), Expect = 8e-07 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%) Query: 172 ILLGLYLMPLGIYS----PCIQEKENLGPKPTI--FGHRGAPMLGPENTMMSFEKAVEHG 225 +L G + L ++S P + + L P+ I HRG PENT+ + +A ++G Sbjct: 33 LLTGSLFVLLRVFSFEPVPSCRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNG 92 Query: 226 AHGLETDIHLSYDHVPFLMHDFDLKRTTN 254 A G+E DI + D +P LMHD + RTT+ Sbjct: 93 ATGVELDIEFTSDGIPVLMHDNTVDRTTD 121 >gi|32698962 glycerophosphodiester phosphodiesterase domain containing 1 [Homo sapiens] Length = 314 Score = 47.8 bits (112), Expect = 2e-05 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Query: 169 FLLILLGLYLMPLGI---YSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHG 225 +LL LG YL+ + Y + +++ HRG ENTM +F+ AV+ G Sbjct: 8 YLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVKIG 67 Query: 226 AHGLETDIHLSYDHVPFLMHDFDLKRTTNIG-EVQPESACENPAF 269 LE D H++ D + HD +LKR T + + CE P + Sbjct: 68 TDTLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPY 112 >gi|25901062 hypothetical protein LOC56261 [Homo sapiens] Length = 672 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 11/82 (13%) Query: 176 LYLMPLGIYSPCIQEKENLGPKPTI---FGHRGAPMLGP--------ENTMMSFEKAVEH 224 + + PL YS ++ + KP I GHRGA ENT+ S A H Sbjct: 293 IIIKPLPGYSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASH 352 Query: 225 GAHGLETDIHLSYDHVPFLMHD 246 GA +E D+HLS D VP + HD Sbjct: 353 GAAFVEFDVHLSKDFVPVVYHD 374 >gi|12965180 taste receptor, type 2, member 10 [Homo sapiens] Length = 307 Score = 37.7 bits (86), Expect = 0.026 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 12 EYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKIL 71 EY ++ WV + WF S+ I +I +S+ + FL L R + L L Sbjct: 82 EYISYFWVIGNQSSMWFATSLSIFYFLKIAN-FSNYI----FLWLKSRTNMVLPFMIVFL 136 Query: 72 ILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLE 131 ++ +L + I+ + + V L+M ++ + + + VI F+ ++ + C+ Sbjct: 137 LISSLLNFAYIAKILNDYKTKNDTVWDLNMYKSEYFIKQILLNLGVIFFFTLSL-ITCIF 195 Query: 132 REVRMRRY-RMTHSEKKRLKQCNVITRLRGLQVPVGLPFLLILLGLYLMPLGIYSPCIQE 190 + + R+ R S L+ N ++ ++V + +IL LY + + I C Sbjct: 196 LIISLWRHNRQMQSNVTGLRDSNTEAHVKAMKVLIS---FIILFILYFIGMAIEISCFTV 252 Query: 191 KEN 193 +EN Sbjct: 253 REN 255 >gi|17986270 dopamine receptor D2 isoform short [Homo sapiens] Length = 414 Score = 32.7 bits (73), Expect = 0.82 Identities = 13/60 (21%), Positives = 29/60 (48%) Query: 70 ILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVAC 129 I + L +++C + +C +R+ + M Y +TVM+ + W ++F ++C Sbjct: 109 IFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISC 168 >gi|4503385 dopamine receptor D2 isoform long [Homo sapiens] Length = 443 Score = 32.7 bits (73), Expect = 0.82 Identities = 13/60 (21%), Positives = 29/60 (48%) Query: 70 ILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVAC 129 I + L +++C + +C +R+ + M Y +TVM+ + W ++F ++C Sbjct: 109 IFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISC 168 >gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo sapiens] Length = 1617 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 12/79 (15%) Query: 24 TGYWFFWS------IFILSL-ARILTAYSSLLLLLGFLLLWERIELY-LHLCHKILILLV 75 + +W W IFI+S+ I+ ++ ++++ GF++++ LY L L + ++ V Sbjct: 261 SAFWLSWGLIYAGFIFIISIFVTIIITFTQIIVMTGFMVIFILFFLYGLSLVALVFLMSV 320 Query: 76 IL----LCVILMFIICKFW 90 +L L +++F++ FW Sbjct: 321 LLKKAVLTNLVVFLLTLFW 339 >gi|146198640 glycerophosphodiester phosphodiesterase domain containing 3 [Homo sapiens] Length = 318 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 203 HRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFDLKRTTNI 255 HRG ENTM + E ++ + LE D L+ D V + HD +L R + + Sbjct: 44 HRGGSGELLENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGL 96 >gi|157388953 G protein-coupled receptor 172B [Homo sapiens] Length = 448 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/29 (55%), Positives = 17/29 (58%) Query: 159 RGLQVPVGLPFLLILLGLYLMPLGIYSPC 187 R L VGL L +L G YLM L I SPC Sbjct: 337 RSLAGLVGLSLLGMLFGAYLMALAILSPC 365 >gi|157388951 G protein-coupled receptor 172B [Homo sapiens] Length = 448 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/29 (55%), Positives = 17/29 (58%) Query: 159 RGLQVPVGLPFLLILLGLYLMPLGIYSPC 187 R L VGL L +L G YLM L I SPC Sbjct: 337 RSLAGLVGLSLLGMLFGAYLMALAILSPC 365 >gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class U [Homo sapiens] Length = 435 Score = 30.0 bits (66), Expect = 5.3 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 13/118 (11%) Query: 26 YWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKILILLVILLCVILMFI 85 ++ F I ++++ + + L + F +W LY L + ++ +I++C +L + Sbjct: 314 FFMFIQIAVIAIFKSYPTVGDVALYMAFFPVWNH--LYRFLRNIFVLTCIIIVCSLLFPV 371 Query: 86 ICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTH 143 + W W+ AG + F Y ++ V IL FY A L RE Y +TH Sbjct: 372 L---W-HLWIYAGSANSNFF-YAITLTFNVGQILLISDYFY-AFLRRE-----YYLTH 418 >gi|169184025 PREDICTED: hypothetical protein [Homo sapiens] Length = 230 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231 PL PC E++ P P FG G P P+ + S E+ H G HG++T Sbjct: 71 PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121 >gi|169179740 PREDICTED: hypothetical protein [Homo sapiens] Length = 230 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231 PL PC E++ P P FG G P P+ + S E+ H G HG++T Sbjct: 71 PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121 >gi|169180137 PREDICTED: hypothetical protein [Homo sapiens] Length = 230 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 180 PLGIYSPCIQEKENLGPK--PTIFGHRGAPMLGPENTMMSFEKAVEH-GAHGLET 231 PL PC E++ P P FG G P P+ + S E+ H G HG++T Sbjct: 71 PLAHPLPC----ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDT 121 >gi|190194429 zinc finger protein 267 [Homo sapiens] Length = 743 Score = 29.6 bits (65), Expect = 7.0 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 19/102 (18%) Query: 188 IQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAV--EHGAHGLETDIHL---------- 235 ++ +E + +P +F H +L T SF+K + HG+ LE ++HL Sbjct: 65 VKSEETVAIQPDVFSHYNKDLLTEHCTEASFQKVISRRHGSCDLE-NLHLRKRWKREECE 123 Query: 236 ----SYDHVPFLMHDFDLKRTTNIGEVQPESACENPAFFNWD 273 YD F FD ++ Q S+C +N+D Sbjct: 124 GHNGCYDEKTFKYDQFDESSVESLFHQQILSSCAKS--YNFD 163 >gi|28882035 taste receptor, type 2, member 19 [Homo sapiens] Length = 299 Score = 29.3 bits (64), Expect = 9.1 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 1 MLLFLWIET--SSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWE 58 ++LFLW T +S + + V + + W + F + LA L+ + LL + F L Sbjct: 61 VMLFLWYATVFNSALYGLE-VRIVASNAWAVTNHFSMWLAASLSIFC-LLKIANFSNL-- 116 Query: 59 RIELYLHLCHKILILLVILLCVILMFIIC 87 + LHL +I +++++L L+F+IC Sbjct: 117 ---ISLHLKKRIKSVVLVILLGPLVFLIC 142 >gi|12232393 major facilitator superfamily domain containing 1 [Homo sapiens] Length = 465 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Query: 22 LGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCHKILILLVILLCVI 81 LGT Y F SI L LA I +L G+L L E++ C + +L V+LL ++ Sbjct: 386 LGTAYGFMQSIQNLGLAIISIIAGMILDSRGYLFL----EVFFIACVSLSLLSVVLLYLV 441 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.328 0.142 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,702,775 Number of Sequences: 37866 Number of extensions: 861938 Number of successful extensions: 2792 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 2771 Number of HSP's gapped (non-prelim): 23 length of query: 520 length of database: 18,247,518 effective HSP length: 107 effective length of query: 413 effective length of database: 14,195,856 effective search space: 5862888528 effective search space used: 5862888528 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.