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Search of human proteins with 33149306
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33149306 uroplakin 3B isoform b [Homo sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33149306 uroplakin 3B isoform b [Homo sapiens] 577 e-165
gi|13399330 uroplakin 3B isoform a [Homo sapiens] 292 2e-79
gi|167555123 uroplakin-like protein [Homo sapiens] 142 4e-34
gi|5902152 uroplakin 3A precursor [Homo sapiens] 103 1e-22
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 36 0.032
gi|148727264 transcription elongation regulator 1-like [Homo sap... 32 0.61
gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens] 30 2.3
gi|110349719 titin isoform N2-A [Homo sapiens] 29 3.9
gi|110349717 titin isoform novex-2 [Homo sapiens] 29 3.9
gi|110349713 titin isoform novex-1 [Homo sapiens] 29 3.9
gi|110349715 titin isoform N2-B [Homo sapiens] 29 3.9
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 29 3.9
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 29 3.9
gi|38569411 AP1 gamma subunit binding protein 1 isoform 2 [Homo ... 29 5.1
gi|38569409 AP1 gamma subunit binding protein 1 isoform 1 [Homo ... 29 5.1
gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 29 5.1
gi|150170699 kinesin family member 26A [Homo sapiens] 29 5.1
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 29 5.1
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 29 5.1
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 29 5.1
gi|27436996 potassium voltage-gated channel, subfamily G, member... 28 6.7
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 28 6.7
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 28 8.7
>gi|33149306 uroplakin 3B isoform b [Homo sapiens]
Length = 276
Score = 577 bits (1488), Expect = e-165
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MGLPWGQPHLGLQMLLLALNCLRPSLSLELVPYTPQITAWDLEGKVTATTFSLEQPRCVF 60
MGLPWGQPHLGLQMLLLALNCLRPSLSLELVPYTPQITAWDLEGKVTATTFSLEQPRCVF
Sbjct: 1 MGLPWGQPHLGLQMLLLALNCLRPSLSLELVPYTPQITAWDLEGKVTATTFSLEQPRCVF 60
Query: 61 DGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPM 120
DGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPM
Sbjct: 61 DGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPM 120
Query: 121 AGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQ 180
AGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQ
Sbjct: 121 AGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQ 180
Query: 181 GKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAASTMRFSSLWWPEEAPEQLRIG 240
GKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAASTMRFSSLWWPEEAPEQLRIG
Sbjct: 181 GKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAASTMRFSSLWWPEEAPEQLRIG 240
Query: 241 SFMGKRYMTHHIPPSEAATLPVGCKPGLDPLPSLSP 276
SFMGKRYMTHHIPPSEAATLPVGCKPGLDPLPSLSP
Sbjct: 241 SFMGKRYMTHHIPPSEAATLPVGCKPGLDPLPSLSP 276
>gi|13399330 uroplakin 3B isoform a [Homo sapiens]
Length = 320
Score = 292 bits (748), Expect = 2e-79
Identities = 151/209 (72%), Positives = 151/209 (72%), Gaps = 55/209 (26%)
Query: 1 MGLPWGQPHLGLQMLLLALNCLRPSLSL-------------------------------- 28
MGLPWGQPHLGLQMLLLALNCLRPSLSL
Sbjct: 1 MGLPWGQPHLGLQMLLLALNCLRPSLSLGEWGSWMDASSQTQGAGGPAGVIGPWAPAPLR 60
Query: 29 --ELVPYT---------------------PQITAWDLEGKVTATTFSLEQPRCVFDGLAS 65
E P T PQITAWDLEGKVTATTFSLEQPRCVFDGLAS
Sbjct: 61 LGEAAPGTPTPVSVAHLLSPVATELVPYTPQITAWDLEGKVTATTFSLEQPRCVFDGLAS 120
Query: 66 ASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG 125
ASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG
Sbjct: 121 ASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG 180
Query: 126 APVLRVGHDHGCHQQPFCNAPLPGPGPYR 154
APVLRVGHDHGCHQQPFCNAPLPGPGPYR
Sbjct: 181 APVLRVGHDHGCHQQPFCNAPLPGPGPYR 209
>gi|167555123 uroplakin-like protein [Homo sapiens]
Length = 263
Score = 142 bits (357), Expect = 4e-34
Identities = 110/272 (40%), Positives = 143/272 (52%), Gaps = 32/272 (11%)
Query: 1 MGLPWGQPHLGLQMLLLALNCLRPSLSL---ELVPYTPQITAWDLEGKVTATTFSLEQPR 57
+GL GQ L L LLL L ++P + E + Y PQ++ L G++T +TF+LEQP
Sbjct: 11 IGLSAGQSQL-LVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTLSTFTLEQPL 69
Query: 58 CVFDGL-ASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPC 116
F S DT+WLVVA SNA++ F P T DIPA G+Y+TL +
Sbjct: 70 GQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRANRVLYQT 129
Query: 117 GDPMAGSGGAPVLRVGHDHGCHQQPF-CNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDP 175
G VLRVG+D C CN PLPGPGPYRVKFL+M+ G P AETKWS
Sbjct: 130 ------RGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEG-PVAETKWSSD 182
Query: 176 ITLHQGKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAA------STMRFSSLWW 229
L Q + ++ PG +S +VI +ILS L +LL LA ++ R +SL
Sbjct: 183 TRLQQAQALRAV---PGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSG 239
Query: 230 PEEAPEQLRIGSFMGKRYMTH--HIPPSEAAT 259
PEEA GS +RY TH P+E A+
Sbjct: 240 PEEA------GSV--RRYTTHLAFSTPAEGAS 263
>gi|5902152 uroplakin 3A precursor [Homo sapiens]
Length = 287
Score = 103 bits (258), Expect = 1e-22
Identities = 81/225 (36%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 16 LLALNCLRPSLSLELVPYTPQITAWDLEGKVTATTFSLEQPRCVFDGLASASDT--VWLV 73
LLAL CLR ++ L P +T T TT +LE+P C+FD + + T V+L
Sbjct: 7 LLALGCLRFGSAVNLQPQLASVTF--ATNNPTLTTVALEKPLCMFDSKEALTGTHEVYLY 64
Query: 74 VAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSP---DQLPCGD-PMAGSGG---- 125
V +A + + + P L T P D +PC D P + G
Sbjct: 65 VLVDSAISRNASVQDSTNTPLGSTFLQTEGGRTGPYKAVAFDLIPCSDLPSLDAIGDVSK 124
Query: 126 ------APVLRVGHDHGCHQQP----FCNAPLPGPGPYRVKFLLMD-TRGSPRAETKWSD 174
A ++RVG + C P CNAPL YR K++L++ + G +T WSD
Sbjct: 125 ASQILNAYLVRVGANGTCLWDPNFQGLCNAPLSAATEYRFKYVLVNMSTGLVEDQTLWSD 184
Query: 175 PITLHQGKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAA 219
PI +Q +IDTWPGRRSG MIVITSIL SL LL+ F A
Sbjct: 185 PIRTNQLTPYSTIDTWPGRRSGGMIVITSILGSLPFFLLVGFAGA 229
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 36.2 bits (82), Expect = 0.032
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 87 ETLADIPASPQLLTDGHYMTLPLSPDQLP------CGD----PMAGSGGAPVLRVGHDHG 136
ET +PAS L GH +L P CG+ P A SGGAP+ +GH G
Sbjct: 6944 ETALRLPASGTHLAPGHSHSLEHDSPSTPRPSSEACGEAQRLPSAPSGGAPIRDMGHPQG 7003
Query: 137 CHQQP 141
Q P
Sbjct: 7004 SKQLP 7008
>gi|148727264 transcription elongation regulator 1-like [Homo
sapiens]
Length = 586
Score = 32.0 bits (71), Expect = 0.61
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 22 LRPSLSLELVPYTPQITAWDLEGKVTATTFSLEQPRC-VFDGLASASDTVWLVVAFSNAS 80
L PS ++ELVP P + L + + P C +F + A D+ W+ S
Sbjct: 126 LPPSSTVELVPVFPHLCPSALATPIGKSWIDKRIPNCKIFFNNSFALDSTWIHPEESRFF 185
Query: 81 RGFQNPETLAD---IPASPQLLTDGHYMTLPLSPDQLPCG 117
G + P LA+ + S T+ L+P +P G
Sbjct: 186 HGHEKPRLLANQVAVSLSRPAPASRPLPTVVLAPQPIPGG 225
>gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 2.3
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 108 PLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFC--NAPLPGPGPYRVKFLLMDTRGS 165
P + QLP P+ G P GHD H+ P N P P LL +
Sbjct: 371 PRADPQLPSRTPVQGPRPRPQSSPGHDPAEHESPRAAKNVPRQNSAPLLQTALLGNGERP 430
Query: 166 PRAETKWSDPITLHQGKTPG 185
P A K + P+TL K G
Sbjct: 431 PGA--KEAPPLTLSLVKPSG 448
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 113 QLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKW 172
QL D + G +++V +DHG + P + L PGP + F+ D R KW
Sbjct: 14765 QLRVRDSLRPDHGLYMIKVENDHGIAKAPCTVSVLDTPGP-PINFVFEDIR-KTSVLCKW 14822
Query: 173 SDPI 176
P+
Sbjct: 14823 EPPL 14826
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 113 QLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKW 172
QL D + G +++V +DHG + P + L PGP + F+ D R KW
Sbjct: 8460 QLRVRDSLRPDHGLYMIKVENDHGIAKAPCTVSVLDTPGP-PINFVFEDIR-KTSVLCKW 8517
Query: 173 SDPI 176
P+
Sbjct: 8518 EPPL 8521
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 113 QLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKW 172
QL D + G +++V +DHG + P + L PGP + F+ D R KW
Sbjct: 8393 QLRVRDSLRPDHGLYMIKVENDHGIAKAPCTVSVLDTPGP-PINFVFEDIR-KTSVLCKW 8450
Query: 173 SDPI 176
P+
Sbjct: 8451 EPPL 8454
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 113 QLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYRVKFLLMDTRGSPRAETKW 172
QL D + G +++V +DHG + P + L PGP + F+ D R KW
Sbjct: 8268 QLRVRDSLRPDHGLYMIKVENDHGIAKAPCTVSVLDTPGP-PINFVFEDIR-KTSVLCKW 8325
Query: 173 SDPI 176
P+
Sbjct: 8326 EPPL 8329
>gi|46397390 pogo transposable element with ZNF domain isoform 1
[Homo sapiens]
Length = 1410
Score = 29.3 bits (64), Expect = 3.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 253 PPSEAATLPVGCKPGLDPLPSLSP 276
PPS T PV P P+P+LSP
Sbjct: 423 PPSPEKTAPVASTPSSTPIPALSP 446
>gi|46397394 pogo transposable element with ZNF domain isoform 2
[Homo sapiens]
Length = 1357
Score = 29.3 bits (64), Expect = 3.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 253 PPSEAATLPVGCKPGLDPLPSLSP 276
PPS T PV P P+P+LSP
Sbjct: 370 PPSPEKTAPVASTPSSTPIPALSP 393
>gi|38569411 AP1 gamma subunit binding protein 1 isoform 2 [Homo
sapiens]
Length = 1302
Score = 28.9 bits (63), Expect = 5.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 69 TVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGGAPV 128
TV ++A + +P+ L PA+P G MTLP +P P P +G P
Sbjct: 357 TVLAMIAVTQRGVPAMSPDALNQFPAAPIPTLSGFSMTLP-TPVSQPTVIPSGPAGSMP- 414
Query: 129 LRVGHDHGCHQQPFCNAPLPGP 150
L +G QP L GP
Sbjct: 415 LSLG-------QPVMGINLVGP 429
>gi|38569409 AP1 gamma subunit binding protein 1 isoform 1 [Homo
sapiens]
Length = 1314
Score = 28.9 bits (63), Expect = 5.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 69 TVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGGAPV 128
TV ++A + +P+ L PA+P G MTLP +P P P +G P
Sbjct: 357 TVLAMIAVTQRGVPAMSPDALNQFPAAPIPTLSGFSMTLP-TPVSQPTVIPSGPAGSMP- 414
Query: 129 LRVGHDHGCHQQPFCNAPLPGP 150
L +G QP L GP
Sbjct: 415 LSLG-------QPVMGINLVGP 429
>gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 3 [Homo sapiens]
Length = 970
Score = 28.9 bits (63), Expect = 5.1
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
Query: 104 YMTLPLSPDQLPCGDPMAGSGGAPV---LRVGHDHGCHQQP--FCNAPLPGP 150
Y+ LSP G P GSGG PV + H G HQ P FC PGP
Sbjct: 814 YLDQTLSPRP---GTPREGSGGEPVHEGRQPVHRQG-HQAPEGFCQRSAPGP 861
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 28.9 bits (63), Expect = 5.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Query: 96 PQLLTDGHYMTLPLSPDQLPCGDPMAGSGGAPVLRVGHDHG 136
P LL LP PDQ PCG A G GH G
Sbjct: 25 PPLLEVSPRKRLPAGPDQDPCGSRPAPEGAGAGPEQGHSAG 65
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 28.9 bits (63), Expect = 5.1
Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 15/103 (14%)
Query: 93 PASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG----APVLRVGHDH-----GCH-QQPF 142
P +PQL T G + P Q G P A AP V H H H Q+P
Sbjct: 202 PGTPQLPTPGPTPSATAVPPQ---GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 258
Query: 143 CNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQGKTPG 185
P P P P+ L + G P A + P LH PG
Sbjct: 259 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP--LHGQGPPG 299
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 28.9 bits (63), Expect = 5.1
Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 15/103 (14%)
Query: 93 PASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG----APVLRVGHDH-----GCH-QQPF 142
P +PQL T G + P Q G P A AP V H H H Q+P
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQ---GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 143 CNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQGKTPG 185
P P P P+ L + G P A + P LH PG
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP--LHGQGPPG 853
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 28.9 bits (63), Expect = 5.1
Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 15/103 (14%)
Query: 93 PASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGG----APVLRVGHDH-----GCH-QQPF 142
P +PQL T G + P Q G P A AP V H H H Q+P
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQ---GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 143 CNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDPITLHQGKTPG 185
P P P P+ L + G P A + P LH PG
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP--LHGQGPPG 853
>gi|27436996 potassium voltage-gated channel, subfamily G, member 4
[Homo sapiens]
Length = 519
Score = 28.5 bits (62), Expect = 6.7
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 183 TPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAASTMRFSSLWWPEEAPEQLRIGSF 242
T G D P G M+ ++SILS G+L++AF A S S + E EQ ++ +
Sbjct: 418 TVGYGDMVPRSVPGQMVALSSILS---GILIMAFPATSIFHTFSHSYLELKKEQEQLQAR 474
Query: 243 MGKRYMTHHIPPSEAATL 260
+ R++ + P SE L
Sbjct: 475 L--RHLQNTGPASECELL 490
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 108 PLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPG 151
P+ P G P AG+ GA GH H H PF +P PG
Sbjct: 265 PMPPGAAGHGPPSAGTPGAG--HPGHGHS-HPHPFPPGGMPHPG 305
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 28.1 bits (61), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 166 PRAETKWSDPITLHQGKTPGSIDTWPGRRSGS 197
P A W+ P+ + + ++P S PGRR S
Sbjct: 556 PHAPPDWAQPLLMGRPESPASAPLQPGRRPAS 587
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,164,449
Number of Sequences: 37866
Number of extensions: 718508
Number of successful extensions: 1595
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 32
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.