Guide to the Human Genome
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Search of human proteins with 32996709

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32996709 transmembrane emp24 protein transport domain
containing 7 [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32996709 transmembrane emp24 protein transport domain contain...   459   e-130
gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens]     287   6e-78
gi|5803149 coated vesicle membrane protein [Homo sapiens]             123   1e-28
gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo ...   106   1e-23
gi|19923442 transmembrane emp24 protein transport domain contain...   104   7e-23
gi|33457308 transmembrane emp24 protein transport domain contain...    83   2e-16
gi|39725636 transmembrane emp24 protein transport domain contain...    79   4e-15
gi|98986464 transmembrane emp24 domain-containing protein 10 pre...    73   2e-13
gi|21389573 transmembrane emp24 protein transport domain contain...    47   1e-05
gi|53729352 WD repeat-containing protein 1 isoform 2 [Homo sapiens]    30   1.3  
gi|9257257 WD repeat-containing protein 1 isoform 1 [Homo sapiens]     30   1.3  
gi|14165405 protocadherin alpha 2 isoform 2 precursor [Homo sapi...    29   2.8  
gi|9256584 protocadherin alpha 2 isoform 1 precursor [Homo sapiens]    29   2.8  
gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like...    28   4.9  
gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo ...    28   8.3  
gi|239743851 PREDICTED: hypothetical protein [Homo sapiens]            28   8.3  
gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]            28   8.3  
gi|239743746 PREDICTED: hypothetical protein [Homo sapiens]            28   8.3  

>gi|32996709 transmembrane emp24 protein transport domain containing
           7 [Homo sapiens]
          Length = 224

 Score =  459 bits (1181), Expect = e-130
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCT 60
           MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCT
Sbjct: 1   MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCT 60

Query: 61  LEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHK 120
           LEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHK
Sbjct: 61  LEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHK 120

Query: 121 TVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAE 180
           TVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAE
Sbjct: 121 TVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAE 180

Query: 181 DLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTTRVGS 224
           DLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTTRVGS
Sbjct: 181 DLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTTRVGS 224


>gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens]
          Length = 217

 Score =  287 bits (734), Expect = 6e-78
 Identities = 140/205 (68%), Positives = 167/205 (81%), Gaps = 2/205 (0%)

Query: 21  LLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDP 80
           LL LL     P GA E+TFELPDNAKQCF+E++ QG K +L++QVITGGHYDVDC +EDP
Sbjct: 14  LLLLLRRAEQPCGA-ELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDP 72

Query: 81  DGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPS-EN 139
            G  +Y+E KKQYDSFT+ A   G Y+FCFSNEFSTF+HKTVYFDFQVG++PP+ P   N
Sbjct: 73  QGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGN 132

Query: 140 RVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLV 199
           RV+ALTQMESACV+IHEALK+VID QTH+RLREAQ R+RAEDLN+RV+YWSVGE + L V
Sbjct: 133 RVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFV 192

Query: 200 VSIGQVFLLKSFFSDKRTTTTRVGS 224
           VS  QV LLKSFF++KR  +  V S
Sbjct: 193 VSFSQVLLLKSFFTEKRPISRAVHS 217


>gi|5803149 coated vesicle membrane protein [Homo sapiens]
          Length = 201

 Score =  123 bits (309), Expect = 1e-28
 Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 1/173 (0%)

Query: 44  NAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKN 103
           +A++CF+E +  GTK  L F+V  GG  D+D  +  PD K +YK  ++    +TF A  +
Sbjct: 28  HAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMD 87

Query: 104 GTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVID 163
           GTYKFCFSN  ST T K V F   +GE P     E       ++E     +  A+ +V  
Sbjct: 88  GTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQ-NKLEEMINELAVAMTAVKH 146

Query: 164 YQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKR 216
            Q +  +RE   R+  ++ N+RV  WS  EAL+L+ +++GQ++ LK FF  +R
Sbjct: 147 EQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVRR 199


>gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo
           sapiens]
          Length = 227

 Score =  106 bits (265), Expect = 1e-23
 Identities = 75/218 (34%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 22  LALLLLVPGP--GGAS-------EITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYD 72
           LAL LL+P    GGA        E TF LP   KQCFY+          E+QVI G   D
Sbjct: 10  LALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLD 69

Query: 73  VDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDF------ 126
           VD  LE P G +L  E +K     T   ++ G YK CF N FST + K V+F+       
Sbjct: 70  VDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFDSLQ 129

Query: 127 ----QVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDL 182
                 G    + P E     +  ++ +  ++   L+  I   T  R  EA+ R+  E  
Sbjct: 130 DDEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEGN 189

Query: 183 NTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTT 220
             RV +WS     +LL+V++ QV  LK FF DKR   T
Sbjct: 190 LERVNFWSAVNVAVLLLVAVLQVCTLKRFFQDKRPVPT 227


>gi|19923442 transmembrane emp24 protein transport domain containing
           5 [Homo sapiens]
          Length = 229

 Score =  104 bits (259), Expect = 7e-23
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 23/220 (10%)

Query: 21  LLALL--LLVPGPGGA-----SEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDV 73
           LLA L  +L+PG  G      S+ TF LP   K+CFY+ +       +E+QV+ G   D+
Sbjct: 13  LLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDI 72

Query: 74  DCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDF---QVGE 130
           D  L  P+GK L  E +K  D      ++ G Y FCF N FST + K ++F+     +GE
Sbjct: 73  DFHLASPEGKTLVFEQRKS-DGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGE 131

Query: 131 DPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTH----------FRLREAQGRSRAE 180
                  E+    +T  +   + + + L+S+   ++            R  EA+ R+  E
Sbjct: 132 QAQ--EQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQE 189

Query: 181 DLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTT 220
               RV +WS+   ++++VVS  QV++LKS F DKR + T
Sbjct: 190 SNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT 229


>gi|33457308 transmembrane emp24 protein transport domain containing
           4 [Homo sapiens]
          Length = 227

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 24/214 (11%)

Query: 23  ALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVIT--------------- 67
           ALLLL     GA  + F + +  K+CF E+I   T     ++                  
Sbjct: 16  ALLLLALCATGAQGLYFHIGETEKRCFIEEIPDETMVIGNYRTQMWDKQKEVFLPSTPGL 75

Query: 68  GGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCF---SNEFSTFT--HKTV 122
           G H +V    +DPDGKV+          FTFT+   G ++ C    S   + F      V
Sbjct: 76  GMHVEV----KDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRV 131

Query: 123 YFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDL 182
           + D QVGE    +P       LT+++     + + ++ +   Q + R RE + R  +E  
Sbjct: 132 HLDIQVGEHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSEST 191

Query: 183 NTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKR 216
           N RV +WS+ + +IL++  I Q+  LKSFF  K+
Sbjct: 192 NQRVLWWSIAQTVILILTGIWQMRHLKSFFEAKK 225


>gi|39725636 transmembrane emp24 protein transport domain containing
           9 [Homo sapiens]
          Length = 235

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 27/232 (11%)

Query: 2   PRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGT---- 57
           PRPG+        GR   R L L+L +   G A  + F + +  K+CF E+I   T    
Sbjct: 12  PRPGTG------LGRV-MRTLLLVLWLATRGSA--LYFHIGETEKKCFIEEIPDETMVIG 62

Query: 58  --------KCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFC 109
                   K   E+Q  T G   +   ++DP+ KV+          FTFT+   G ++ C
Sbjct: 63  NYRTQLYDKQREEYQPATPG-LGMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQIC 121

Query: 110 F---SNEFSTFTHKT--VYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDY 164
               S +FS F      V+ D QVGE    +        L++++     + E ++ +   
Sbjct: 122 LHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKE 181

Query: 165 QTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKR 216
           Q + R RE + R  +E  N RV +WS+ + LIL+ + + Q+  LKSFF  K+
Sbjct: 182 QNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233


>gi|98986464 transmembrane emp24 domain-containing protein 10
           precursor [Homo sapiens]
          Length = 219

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 5/201 (2%)

Query: 21  LLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVIT----GGHYDVDCR 76
           L  LLL + GP     I+F LP N+++C  E+I +    T  +++       G      +
Sbjct: 16  LALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLK 75

Query: 77  LEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFS-TFTHKTVYFDFQVGEDPPLF 135
           + D  G +LY +       F FT      ++ CF ++ +     + V  D + G +   +
Sbjct: 76  ITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNY 135

Query: 136 PSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEAL 195
               +V  L  +E     + +  +S+++   + + RE + R   E  NTRV Y+S+    
Sbjct: 136 EEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMF 195

Query: 196 ILLVVSIGQVFLLKSFFSDKR 216
            L+ ++  QVF L+ FF  K+
Sbjct: 196 CLIGLATWQVFYLRRFFKAKK 216


>gi|21389573 transmembrane emp24 protein transport domain containing
           6 [Homo sapiens]
          Length = 240

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 14/192 (7%)

Query: 41  LPDNAKQCFYEDIAQGTKC--TLEFQVITGGHYD--VDCRLEDPDGKVLYKEMKKQYDSF 96
           +P    +CF++   Q      + E Q   G  +D  V     +P G  L    +      
Sbjct: 48  IPPGGTECFWQFAHQTGYFYFSCEVQRTVGMSHDRHVAATAHNPQG-FLIDTSQGVRGQI 106

Query: 97  TFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHE 156
            F+  + G Y+ C SN+ + F    VY +F V  + P   ++++     Q+     +I +
Sbjct: 107 NFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEGP--ETDHKQKERKQLNDTLDAIED 164

Query: 157 ALKSVID-------YQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLK 209
             + V +       Y    R+R+       +     V +WS  ++L++++  I Q++ LK
Sbjct: 165 GTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNYVNWWSTAQSLVIILSGILQLYFLK 224

Query: 210 SFFSDKRTTTTR 221
             F+   TT T+
Sbjct: 225 RLFNVPTTTDTK 236


>gi|53729352 WD repeat-containing protein 1 isoform 2 [Homo sapiens]
          Length = 466

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 99  TASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPS--ENRVSALTQMESACVSIHE 156
           T  KNG   + +S       +   Y+D + GE+         N+VS +T  ES  + I  
Sbjct: 187 TVHKNGGKSYIYSGSHDGHIN---YWDSETGENDSFAGKGHTNQVSRMTVDESGQL-ISC 242

Query: 157 ALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLK 209
           ++   + Y T   LR+  G+   + L+ +    +VG     +VV IGQ+ LLK
Sbjct: 243 SMDDTVRY-TSLMLRDYSGQGVVK-LDVQPKCVAVGPGGYAVVVCIGQIVLLK 293


>gi|9257257 WD repeat-containing protein 1 isoform 1 [Homo sapiens]
          Length = 606

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 99  TASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPS--ENRVSALTQMESACVSIHE 156
           T  KNG   + +S       +   Y+D + GE+         N+VS +T  ES  + I  
Sbjct: 327 TVHKNGGKSYIYSGSHDGHIN---YWDSETGENDSFAGKGHTNQVSRMTVDESGQL-ISC 382

Query: 157 ALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLK 209
           ++   + Y T   LR+  G+   + L+ +    +VG     +VV IGQ+ LLK
Sbjct: 383 SMDDTVRY-TSLMLRDYSGQGVVK-LDVQPKCVAVGPGGYAVVVCIGQIVLLK 433


>gi|14165405 protocadherin alpha 2 isoform 2 precursor [Homo
          sapiens]
          Length = 824

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 15 GRWGCRLLALLLLVPGPGGASEITFELPDNAKQ-CFYEDIAQGTKCTLE------FQVIT 67
          G W  RLL+LLLL     G+ ++ + +P+ AK   F   IAQ     LE      F+V +
Sbjct: 10 GAW-TRLLSLLLLAAWEVGSGQLRYSVPEEAKHGTFVGRIAQDLGLELEELVPRLFRVAS 68

Query: 68 GGHYDV 73
            H D+
Sbjct: 69 KRHGDL 74


>gi|9256584 protocadherin alpha 2 isoform 1 precursor [Homo
          sapiens]
          Length = 948

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 15 GRWGCRLLALLLLVPGPGGASEITFELPDNAKQ-CFYEDIAQGTKCTLE------FQVIT 67
          G W  RLL+LLLL     G+ ++ + +P+ AK   F   IAQ     LE      F+V +
Sbjct: 10 GAW-TRLLSLLLLAAWEVGSGQLRYSVPEEAKHGTFVGRIAQDLGLELEELVPRLFRVAS 68

Query: 68 GGHYDV 73
            H D+
Sbjct: 69 KRHGDL 74


>gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like
           domains 1 [Homo sapiens]
          Length = 1138

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 29  PGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLE 78
           PG  G   +TF LPD    C      +G++C    +    GH+  DCRL+
Sbjct: 273 PGISGCRGLTFCLPD-PYGCSCGSGWRGSQCQ---EACAPGHFGADCRLQ 318


>gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo
           sapiens]
          Length = 541

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 21  LLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKC 59
           LL  L  +PGPG A+  T   P+ A    Y++  +G  C
Sbjct: 111 LLPKLPALPGPGAAATHTRMPPEQALMGEYQETPEGAPC 149


>gi|239743851 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 1   MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFEL 41
           +P PG       VA  W C  LAL L  PGPG A  +   L
Sbjct: 143 LPFPG-------VALPWPCPALALALPYPGPGSALTLALVL 176


>gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 1   MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFEL 41
           +P PG       VA  W C  LAL L  PGPG A  +   L
Sbjct: 143 LPFPG-------VALPWPCPALALALPYPGPGSALTLALVL 176


>gi|239743746 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 1   MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFEL 41
           +P PG       VA  W C  LAL L  PGPG A  +   L
Sbjct: 143 LPFPG-------VALPWPCPALALALPYPGPGSALTLALVL 176


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,880,243
Number of Sequences: 37866
Number of extensions: 384162
Number of successful extensions: 788
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 18
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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