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Search of human proteins with 32967280
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 316 6e-87
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 302 8e-83
gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo sap... 236 4e-63
gi|32967278 ubiquitin-conjugating enzyme E2A isoform 3 [Homo sap... 162 1e-40
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 133 7e-32
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 133 7e-32
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 130 6e-31
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 129 1e-30
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 129 1e-30
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 129 1e-30
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 128 2e-30
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 126 6e-30
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 125 1e-29
gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens] 124 2e-29
gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens] 124 2e-29
gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens] 124 2e-29
gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens] 124 2e-29
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 123 7e-29
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 117 4e-27
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 117 4e-27
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 117 4e-27
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 115 1e-26
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 115 2e-26
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 115 2e-26
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 115 2e-26
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 316 bits (809), Expect = 6e-87
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 152
PANSQAAQLYQENKREYEKRVSAIVEQSWRDC
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 152
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 302 bits (773), Expect = 8e-83
Identities = 145/151 (96%), Positives = 147/151 (97%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
MSTPARRRLMRDFKRLQEDPP GVSGAPSENNIM WNAVIFGPEGTPFEDGTFKL IEF+
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
EEYPNKPPTVRF+SKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 151
PANSQAAQLYQENKREYEKRVSAIVEQSW D
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWND 151
>gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo
sapiens]
Length = 122
Score = 236 bits (603), Expect = 4e-63
Identities = 122/152 (80%), Positives = 122/152 (80%), Gaps = 30/152 (19%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFED
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFED---------- 50
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 51 --------------------VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 90
Query: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 152
PANSQAAQLYQENKREYEKRVSAIVEQSWRDC
Sbjct: 91 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 122
>gi|32967278 ubiquitin-conjugating enzyme E2A isoform 3 [Homo
sapiens]
Length = 77
Score = 162 bits (409), Expect = 1e-40
Identities = 77/77 (100%), Positives = 77/77 (100%)
Query: 76 MFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR 135
MFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR
Sbjct: 1 MFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR 60
Query: 136 EYEKRVSAIVEQSWRDC 152
EYEKRVSAIVEQSWRDC
Sbjct: 61 EYEKRVSAIVEQSWRDC 77
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 133 bits (334), Expect = 7e-32
Identities = 58/135 (42%), Positives = 88/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ LQ DPPA S P +++ W A I GP + ++ G F LT+ F +YP
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP + F +K++HPN+ ++GSICLDIL+++WSP VS +L SI SLL +PNP+ P
Sbjct: 62 FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
AQ+Y+ +K +Y +
Sbjct: 122 DIAQIYKSDKEKYNR 136
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 133 bits (334), Expect = 7e-32
Identities = 59/135 (43%), Positives = 88/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ LQ DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F +K++HPN+ ++GSICLDIL+++WSP VS +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A Y+ ++ +Y +
Sbjct: 122 EIAHTYKADREKYNR 136
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 130 bits (326), Expect = 6e-31
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDREKYNR 136
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 129 bits (324), Expect = 1e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
A +R+ ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 65 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 125 QAAQLYQENKREYEK 139
+ A++Y+ ++ +Y +
Sbjct: 122 EIARIYKTDRDKYNR 136
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 128 bits (322), Expect = 2e-30
Identities = 56/134 (41%), Positives = 88/134 (65%)
Query: 6 RRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPN 65
R+ L ++ L DPPA S P +++ W A I GP +P++ G F LTI F +YP
Sbjct: 5 RKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 64
Query: 66 KPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQ 125
KPP V F ++++HPN+ ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P +
Sbjct: 65 KPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPE 124
Query: 126 AAQLYQENKREYEK 139
A++Y+ ++ +Y +
Sbjct: 125 IARIYKTDRDKYNR 138
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 126 bits (317), Expect = 6e-30
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 14/162 (8%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAP-SENNIMVWNAVIFGPEGTPFEDGTFKLTIEF 59
M+ A +RLM ++K+L +PP G+ P +E N W A+I GPE T FE G F + F
Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSF 60
Query: 60 TEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSIL 106
+YP PP +RF +MFHPN+Y DG +C+ IL RWSP V IL
Sbjct: 61 PLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKIL 120
Query: 107 TSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
S+ S+L EPN S AN A++++++++ ++ K IV++S
Sbjct: 121 LSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 125 bits (315), Expect = 1e-29
Identities = 56/130 (43%), Positives = 87/130 (66%)
Query: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNK 66
RR++++ +RL +P G+ P E+N ++ VI GP+ +PFE GTFKL + EEYP
Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA 65
Query: 67 PPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQA 126
P VRF++K++HPNV G ICLDIL+++WSP + ++L SIQ+LL PNP+ P +
Sbjct: 66 APKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
Query: 127 AQLYQENKRE 136
A+ ++ N+ +
Sbjct: 126 AEQWKTNEAQ 135
>gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 124 bits (312), Expect = 2e-29
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSEN-----NIMVWNAVIFGPEGTPFEDGTFKL 55
MS A RL ++ K ++D P G P++N N+M W I G +GTP+E G FKL
Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 60
Query: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ--NRWSPTYDVSSILTSIQSLL 113
+ F ++YP+ PP +F +FHPNVY G++CL IL+ W P + IL IQ LL
Sbjct: 61 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 120
Query: 114 DEPNPNSPANSQAAQLYQENKREYEKRVSA 143
+EPN PA ++A +Y +N+ EYEKRV A
Sbjct: 121 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRA 150
>gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 124 bits (312), Expect = 2e-29
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSEN-----NIMVWNAVIFGPEGTPFEDGTFKL 55
MS A RL ++ K ++D P G P++N N+M W I G +GTP+E G FKL
Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 60
Query: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ--NRWSPTYDVSSILTSIQSLL 113
+ F ++YP+ PP +F +FHPNVY G++CL IL+ W P + IL IQ LL
Sbjct: 61 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 120
Query: 114 DEPNPNSPANSQAAQLYQENKREYEKRVSA 143
+EPN PA ++A +Y +N+ EYEKRV A
Sbjct: 121 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRA 150
>gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 124 bits (312), Expect = 2e-29
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSEN-----NIMVWNAVIFGPEGTPFEDGTFKL 55
MS A RL ++ K ++D P G P++N N+M W I G +GTP+E G FKL
Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 60
Query: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ--NRWSPTYDVSSILTSIQSLL 113
+ F ++YP+ PP +F +FHPNVY G++CL IL+ W P + IL IQ LL
Sbjct: 61 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 120
Query: 114 DEPNPNSPANSQAAQLYQENKREYEKRVSA 143
+EPN PA ++A +Y +N+ EYEKRV A
Sbjct: 121 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRA 150
>gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 124 bits (312), Expect = 2e-29
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSEN-----NIMVWNAVIFGPEGTPFEDGTFKL 55
MS A RL ++ K ++D P G P++N N+M W I G +GTP+E G FKL
Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 60
Query: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ--NRWSPTYDVSSILTSIQSLL 113
+ F ++YP+ PP +F +FHPNVY G++CL IL+ W P + IL IQ LL
Sbjct: 61 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 120
Query: 114 DEPNPNSPANSQAAQLYQENKREYEKRVSA 143
+EPN PA ++A +Y +N+ EYEKRV A
Sbjct: 121 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRA 150
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 123 bits (308), Expect = 7e-29
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 4 PARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 63
P +RL ++ L G+S P +N+ W I G GT +ED +KL++EF Y
Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGY 89
Query: 64 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPAN 123
P PTV+F++ +HPNV G+ICLDIL+ +WS YDV +IL SIQSLL EPN +SP N
Sbjct: 90 PYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLN 149
Query: 124 SQAAQLYQ 131
+ AA+L++
Sbjct: 150 THAAELWK 157
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 117 bits (293), Expect = 4e-27
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 23 GVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVY 82
G+S P +N+ W I G GT +ED +KL++EF YP PTV+F++ +HPNV
Sbjct: 10 GISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVD 69
Query: 83 ADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQ 131
G+ICLDIL+ +WS YDV +IL SIQSLL EPN +SP N+ AA+L++
Sbjct: 70 TQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 118
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 117 bits (293), Expect = 4e-27
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 23 GVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVY 82
G+S P +N+ W I G GT +ED +KL++EF YP PTV+F++ +HPNV
Sbjct: 10 GISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVD 69
Query: 83 ADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQ 131
G+ICLDIL+ +WS YDV +IL SIQSLL EPN +SP N+ AA+L++
Sbjct: 70 TQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 118
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 117 bits (293), Expect = 4e-27
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
+ST A+R + ++ + DPP S P +NI W + I GP G+ +E G F L I FT
Sbjct: 45 LSTSAKR-IQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFT 103
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
EYP KPP V F ++++H N+ + G ICLDIL++ WSP +S +L SI SLL + NP
Sbjct: 104 PEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 163
Query: 121 PANSQAAQLYQENKREYEK 139
P A Y N+ E+++
Sbjct: 164 PLVGSIATQYMTNRAEHDR 182
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 115 bits (288), Expect = 1e-26
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
+ST A+R + ++ + DPP S P +NI W + I GP G+ +E G F L I F+
Sbjct: 53 LSTSAKR-IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS 111
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
+YP KPP V F ++++H N+ + G ICLDIL++ WSP +S +L SI SLL + NP
Sbjct: 112 PDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 171
Query: 121 PANSQAAQLYQENKREYEK 139
P A Y N+ E+++
Sbjct: 172 PLVGSIATQYMTNRAEHDR 190
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 115 bits (287), Expect = 2e-26
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
+ST A+R + ++ + DPP S P +NI W + I GP G+ +E G F L I F+
Sbjct: 59 LSTSAKR-IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS 117
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
+YP KPP V F ++++H N+ + G ICLDIL++ WSP +S +L SI SLL + NP
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 177
Query: 121 PANSQAAQLYQENKREYEK 139
P A Y N+ E+++
Sbjct: 178 PLVGSIATQYLTNRAEHDR 196
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 115 bits (287), Expect = 2e-26
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
+ST A+R + ++ + DPP S P +NI W + I GP G+ +E G F L I F+
Sbjct: 59 LSTSAKR-IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS 117
Query: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
+YP KPP V F ++++H N+ + G ICLDIL++ WSP +S +L SI SLL + NP
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 177
Query: 121 PANSQAAQLYQENKREYEK 139
P A Y N+ E+++
Sbjct: 178 PLVGSIATQYLTNRAEHDR 196
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 115 bits (287), Expect = 2e-26
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 24/173 (13%)
Query: 3 TPARRRLMRDFKRLQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTE 61
T +++ LM + K LQE+P G E+++ W IFGP T +E G FK I+F
Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPI 66
Query: 62 EYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTS 108
+YP PPT RF++KM+HPN+Y +G +C+ IL RW+PT +V +IL S
Sbjct: 67 DYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS 126
Query: 109 IQSLLDEPNPNSPANSQAAQLYQE------NKREY----EKRVSAIVEQSWRD 151
+ SLL+EPN SPAN A+ ++++ +EY K+VSA ++ +D
Sbjct: 127 VISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKD 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,852,486
Number of Sequences: 37866
Number of extensions: 314944
Number of successful extensions: 911
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 801
Number of HSP's gapped (non-prelim): 79
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.