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Search of human proteins with 122937406
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937406 folate receptor 4 (delta) homolog [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937406 folate receptor 4 (delta) homolog [Homo sapiens] 550 e-157
gi|9257217 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|9257215 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|9257213 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|9257207 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|9257205 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|4758400 folate receptor 1 precursor [Homo sapiens] 311 4e-85
gi|112382370 folate receptor 3 precursor [Homo sapiens] 302 2e-82
gi|166064056 folate receptor 2 precursor [Homo sapiens] 301 3e-82
gi|166064054 folate receptor 2 precursor [Homo sapiens] 301 3e-82
gi|166064052 folate receptor 2 precursor [Homo sapiens] 301 3e-82
gi|166064050 folate receptor 2 precursor [Homo sapiens] 301 3e-82
gi|13899247 retbindin isoform 2 [Homo sapiens] 36 0.027
gi|124486584 retbindin isoform 1 [Homo sapiens] 36 0.027
gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo sa... 34 0.13
gi|34734079 frizzled 6 [Homo sapiens] 30 1.9
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 29 3.2
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 29 3.2
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 29 4.2
gi|217416372 coiled-coil domain containing 142 [Homo sapiens] 29 4.2
gi|110624774 mannose receptor, C type 2 [Homo sapiens] 29 4.2
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 28 7.2
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 28 7.2
gi|24497499 solute carrier family 22 member 8 [Homo sapiens] 28 7.2
gi|31377581 hypothetical protein LOC124989 [Homo sapiens] 28 7.2
gi|4559408 colony stimulating factor 2 receptor, beta precursor ... 28 9.4
>gi|122937406 folate receptor 4 (delta) homolog [Homo sapiens]
Length = 243
Score = 550 bits (1418), Expect = e-157
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MACWWPLLLELWTVMPTWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
MACWWPLLLELWTVMPTWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT
Sbjct: 1 MACWWPLLLELWTVMPTWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
Query: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV
Sbjct: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
Query: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE
Sbjct: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
Query: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASSAPSWELSYTIMVCSLFLP 240
KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASSAPSWELSYTIMVCSLFLP
Sbjct: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASSAPSWELSYTIMVCSLFLP 240
Query: 241 FLS 243
FLS
Sbjct: 241 FLS 243
>gi|9257217 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|9257215 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|9257213 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|9257207 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|9257205 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|4758400 folate receptor 1 precursor [Homo sapiens]
Length = 257
Score = 311 bits (796), Expect = 4e-85
Identities = 140/246 (56%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 7 LLLELWTVMP-------TWAGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLT 59
LLL +W + WA ELLN+CMNAKHHK P PEDKL+E+C PW+ NACC+
Sbjct: 10 LLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTN 69
Query: 60 TSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERV 119
TS EAH DVS LY F+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ERV
Sbjct: 70 TSQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERV 129
Query: 120 VNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLC 179
+NVPLC+EDCE+WWEDCR SYTCKSNW GW+W+ G N+C GA C PF YFPTP LC
Sbjct: 130 LNVPLCKEDCEQWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLC 189
Query: 180 EKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFA---SSAPSWELSYTIMVCS 236
+ W++S+K S R SGRC+Q WF+PAQGNPN VAR +A S A W ++ +
Sbjct: 190 NEIWTHSYKVSNYSRGSGRCIQMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLA 249
Query: 237 LFLPFL 242
L L +L
Sbjct: 250 LMLLWL 255
>gi|112382370 folate receptor 3 precursor [Homo sapiens]
Length = 245
Score = 302 bits (773), Expect = 2e-82
Identities = 129/204 (63%), Positives = 152/204 (74%)
Query: 19 AGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPLYNFSLFH 78
A +LLN+CMNAKHHK PSPED+LY +C PWK NACCT +TS E H D S LYNF+ H
Sbjct: 29 ARTDLLNVCMNAKHHKTQPSPEDELYGQCSPWKKNACCTASTSQELHKDTSRLYNFNWDH 88
Query: 79 CGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVVNVPLCQEDCEEWWEDCRM 138
CG + P C++HFIQ C YECSPNLGPWI+ V S + ER++NVPLC+EDCE WWEDCR
Sbjct: 89 CGKMEPTCKRHFIQDSCLYECSPNLGPWIRQVNQSWRKERILNVPLCKEDCERWWEDCRT 148
Query: 139 SYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCEKTWSNSFKASPERRNSGR 198
SYTCKSNW GW+W+ G N CP GA C F YFPTPA LCE WS+SFK S R SGR
Sbjct: 149 SYTCKSNWHKGWNWTSGINECPAGALCSTFESYFPTPAALCEGLWSHSFKVSNYSRGSGR 208
Query: 199 CLQKWFEPAQGNPNVAVARLFASS 222
C+Q WF+ AQGNPN VA+ +A++
Sbjct: 209 CIQMWFDSAQGNPNEEVAKFYAAA 232
>gi|166064056 folate receptor 2 precursor [Homo sapiens]
Length = 255
Score = 301 bits (771), Expect = 3e-82
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 3/222 (1%)
Query: 4 WWPLLLELWTVMPTWAGDE---LLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
W PLLL L V + + LLN+CM+AKHHK P PEDKL+++C PWK NACCT +T
Sbjct: 5 WMPLLLLLVCVATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTAST 64
Query: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
S E H D S LYNF+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ER +
Sbjct: 65 SQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFL 124
Query: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
+VPLC+EDC+ WWEDC S+TCKSNW GWDW+ G N+CP GA C F YFPTPA LCE
Sbjct: 125 DVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCE 184
Query: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASS 222
WS+S+K S R SGRC+Q WF+ AQGNPN VAR +A++
Sbjct: 185 GLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA 226
>gi|166064054 folate receptor 2 precursor [Homo sapiens]
Length = 255
Score = 301 bits (771), Expect = 3e-82
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 3/222 (1%)
Query: 4 WWPLLLELWTVMPTWAGDE---LLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
W PLLL L V + + LLN+CM+AKHHK P PEDKL+++C PWK NACCT +T
Sbjct: 5 WMPLLLLLVCVATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTAST 64
Query: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
S E H D S LYNF+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ER +
Sbjct: 65 SQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFL 124
Query: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
+VPLC+EDC+ WWEDC S+TCKSNW GWDW+ G N+CP GA C F YFPTPA LCE
Sbjct: 125 DVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCE 184
Query: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASS 222
WS+S+K S R SGRC+Q WF+ AQGNPN VAR +A++
Sbjct: 185 GLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA 226
>gi|166064052 folate receptor 2 precursor [Homo sapiens]
Length = 255
Score = 301 bits (771), Expect = 3e-82
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 3/222 (1%)
Query: 4 WWPLLLELWTVMPTWAGDE---LLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
W PLLL L V + + LLN+CM+AKHHK P PEDKL+++C PWK NACCT +T
Sbjct: 5 WMPLLLLLVCVATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTAST 64
Query: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
S E H D S LYNF+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ER +
Sbjct: 65 SQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFL 124
Query: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
+VPLC+EDC+ WWEDC S+TCKSNW GWDW+ G N+CP GA C F YFPTPA LCE
Sbjct: 125 DVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCE 184
Query: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASS 222
WS+S+K S R SGRC+Q WF+ AQGNPN VAR +A++
Sbjct: 185 GLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA 226
>gi|166064050 folate receptor 2 precursor [Homo sapiens]
Length = 255
Score = 301 bits (771), Expect = 3e-82
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 3/222 (1%)
Query: 4 WWPLLLELWTVMPTWAGDE---LLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTT 60
W PLLL L V + + LLN+CM+AKHHK P PEDKL+++C PWK NACCT +T
Sbjct: 5 WMPLLLLLVCVATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTAST 64
Query: 61 SWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYECSPNLGPWIQPVAPSGQGERVV 120
S E H D S LYNF+ HCG + P C++HFIQ C YECSPNLGPWIQ V S + ER +
Sbjct: 65 SQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFL 124
Query: 121 NVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCE 180
+VPLC+EDC+ WWEDC S+TCKSNW GWDW+ G N+CP GA C F YFPTPA LCE
Sbjct: 125 DVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCE 184
Query: 181 KTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASS 222
WS+S+K S R SGRC+Q WF+ AQGNPN VAR +A++
Sbjct: 185 GLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA 226
>gi|13899247 retbindin isoform 2 [Homo sapiens]
Length = 261
Score = 36.2 bits (82), Expect = 0.027
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 123 PLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCEKT 182
PLC+E C+ W+ +C TC W K C CL + F DLC
Sbjct: 145 PLCEELCQAWFANCEDDITCGPTWLP----LSEKRGCE--PSCLTYGQTFADGTDLCRSA 198
Query: 183 WSNSFK-ASPERRN 195
++ A+P R+
Sbjct: 199 LGHALPVAAPGARH 212
>gi|124486584 retbindin isoform 1 [Homo sapiens]
Length = 229
Score = 36.2 bits (82), Expect = 0.027
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 123 PLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYFPTPADLCEKT 182
PLC+E C+ W+ +C TC W K C CL + F DLC
Sbjct: 113 PLCEELCQAWFANCEDDITCGPTWLP----LSEKRGCE--PSCLTYGQTFADGTDLCRSA 166
Query: 183 WSNSFK-ASPERRN 195
++ A+P R+
Sbjct: 167 LGHALPVAAPGARH 180
>gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo
sapiens]
Length = 678
Score = 33.9 bits (76), Expect = 0.13
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 111 APSGQGERVVNVPLC-QEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFS 169
A S Q + +V C Q CE+ + SYTC + RGG SQ + C C+PFS
Sbjct: 228 AYSSQEKACRDVDECLQGRCEQVCVNSPGSYTCHCDGRGGLKLSQDMDTCEDILPCVPFS 287
>gi|34734079 frizzled 6 [Homo sapiens]
Length = 706
Score = 30.0 bits (66), Expect = 1.9
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 88 KHFIQAICFYECSPNLGPWIQPVAPSGQGERVVNVPLCQEDCEEWWEDCR 137
+HF+ + ECSPN+ ++ E++ VP C++ CE+ + DC+
Sbjct: 59 EHFLP-LANLECSPNIETFLCKAFVPTCIEQIHVVPPCRKLCEKVYSDCK 107
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 29.3 bits (64), Expect = 3.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 88 KHFIQAICFYECSPNLGPWIQPVA---PSGQGERVVNVPLCQEDCEEWWEDCRMSYT-CK 143
+ F ++IC C N G + P PSG + N P+C + C+ E S C
Sbjct: 1483 RRFQKSICDPTCM-NGGKCVGPSTCSCPSGWSGKRCNTPICLQKCKNGGECIAPSICHCP 1541
Query: 144 SNWRG 148
S+W G
Sbjct: 1542 SSWEG 1546
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 29.3 bits (64), Expect = 3.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 159 CPKGAQCLPFSHYFPTPADLCEKTWSNSFKASP 191
C KG + +P ++FPT + C K + FK P
Sbjct: 1257 CHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPP 1289
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 28.9 bits (63), Expect = 4.2
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 19/81 (23%)
Query: 31 KHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPLYNFSLFHCGLLMP------ 84
KH++ P+ LY++ + N ++DV PL + C P
Sbjct: 2056 KHNQLYKKPDVPLYKKI---RSNV----------YVDVKPLSGYEATTCNCKKPDDDTRK 2102
Query: 85 GCRKHFIQAICFYECSPNLGP 105
GC + + F ECSPN P
Sbjct: 2103 GCVDDCLNRMIFAECSPNTCP 2123
>gi|217416372 coiled-coil domain containing 142 [Homo sapiens]
Length = 743
Score = 28.9 bits (63), Expect = 4.2
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 13/85 (15%)
Query: 79 CGLLMPGCRKHFIQ------AICFYECSPNLGPWIQPVAPSGQGERVVNVPLCQEDCEEW 132
CGL + G + Q A C NLGPW P A + Q + + ++CE+
Sbjct: 291 CGLGLGGAGALWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEK- 349
Query: 133 WEDCRMSYTCKSNWRGG--WDWSQG 155
++ C W W QG
Sbjct: 350 ----ELASLCHRLLHQSLIWSWDQG 370
>gi|110624774 mannose receptor, C type 2 [Homo sapiens]
Length = 1479
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 106 WIQPVAPSGQGERVVNVPLCQEDCEEWWEDCRMSYTC-KSNWRGGWDWSQGKNRC-PKGA 163
W G+ ER P+ DCE +W+ +++ +C + N++ W + C +GA
Sbjct: 212 WCATTQDYGKDERWGFCPIKSNDCETFWDKDQLTDSCYQFNFQSTLSWREAWASCEQQGA 271
Query: 164 QCL 166
L
Sbjct: 272 DLL 274
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 28.1 bits (61), Expect = 7.2
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 16/90 (17%)
Query: 136 CRMSYTCKSNWRGGWDWSQGKNRCP-----------KGAQCLPFSHYFPTPADLCEKTWS 184
CR C W+ G W C G C+ +P PA++ +K W
Sbjct: 1283 CRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCV-----YPNPANVPKKNWW 1337
Query: 185 NSFKASPERRNSGRCLQKWFEPAQGNPNVA 214
+S + G + F + G+ N+A
Sbjct: 1338 SSKSKEKKHIWFGETINGGFHFSYGDDNLA 1367
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 28.1 bits (61), Expect = 7.2
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 16/90 (17%)
Query: 136 CRMSYTCKSNWRGGWDWSQGKNRCP-----------KGAQCLPFSHYFPTPADLCEKTWS 184
CR C W+ G W C G C+ +P PA++ +K W
Sbjct: 1214 CRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCV-----YPNPANVPKKNWW 1268
Query: 185 NSFKASPERRNSGRCLQKWFEPAQGNPNVA 214
+S + G + F + G+ N+A
Sbjct: 1269 SSKSKEKKHIWFGETINGGFHFSYGDDNLA 1298
>gi|24497499 solute carrier family 22 member 8 [Homo sapiens]
Length = 542
Score = 28.1 bits (61), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 90 FIQAICFYECSP----NLGPWIQPVAPSGQGER 118
F A + C P + GPW+ P+ P+G+ ER
Sbjct: 40 FTAATPVHHCRPPHNASTGPWVLPMGPNGKPER 72
>gi|31377581 hypothetical protein LOC124989 [Homo sapiens]
Length = 973
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 20 GDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPL 71
G + L + ++K + +P P KL +E + K+N+ C L + H SPL
Sbjct: 87 GRKSLQVQQHSKRTEIIP-PFLKLSKEKVTRKENSLCKLPNQYSVHKTSSPL 137
>gi|4559408 colony stimulating factor 2 receptor, beta precursor
[Homo sapiens]
Length = 897
Score = 27.7 bits (60), Expect = 9.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 175 PADLCEKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFAS-------SAPSWE 227
P L ++ +S PE +N + Q P Q P V V +LF + S P WE
Sbjct: 830 PGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWE 889
Query: 228 LSYTIMVC 235
++ VC
Sbjct: 890 VNKPGEVC 897
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,518,879
Number of Sequences: 37866
Number of extensions: 680622
Number of successful extensions: 1083
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1066
Number of HSP's gapped (non-prelim): 27
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.