BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1 isoform b [Homo sapiens] (268 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1... 568 e-162 gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1... 511 e-145 gi|24308237 phosphatidylinositol transfer protein, membrane-asso... 234 5e-62 gi|195927017 phosphatidylinositol transfer protein, membrane-ass... 221 5e-58 gi|195927015 phosphatidylinositol transfer protein, membrane-ass... 221 5e-58 gi|5453908 phosphatidylinositol transfer protein, alpha [Homo sa... 204 9e-53 gi|6912594 phosphatidylinositol transfer protein, beta [Homo sap... 183 2e-46 gi|22202619 cathepsin L1 preproprotein [Homo sapiens] 30 2.2 gi|4503155 cathepsin L1 preproprotein [Homo sapiens] 30 2.2 gi|45269133 glial cells missing homolog a [Homo sapiens] 30 2.9 gi|125490354 spermatogenesis associated 1 [Homo sapiens] 29 3.8 gi|222446611 R-spondin family, member 2 [Homo sapiens] 29 4.9 gi|148839350 hypothetical protein LOC25858 [Homo sapiens] 29 4.9 gi|109715862 gem (nuclear organelle) associated protein 8 [Homo ... 28 6.4 gi|109715864 gem (nuclear organelle) associated protein 8 [Homo ... 28 6.4 gi|8923481 gem (nuclear organelle) associated protein 8 [Homo sa... 28 6.4 >gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1 isoform b [Homo sapiens] Length = 268 Score = 568 bits (1465), Expect = e-162 Identities = 268/268 (100%), Positives = 268/268 (100%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK Sbjct: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 Query: 61 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN 120 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN Sbjct: 61 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN 120 Query: 121 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI 180 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI Sbjct: 121 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI 180 Query: 181 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREYEKN 240 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREYEKN Sbjct: 181 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREYEKN 240 Query: 241 MHEQTNIKVCNQHSSPVDDIESHAQTST 268 MHEQTNIKVCNQHSSPVDDIESHAQTST Sbjct: 241 MHEQTNIKVCNQHSSPVDDIESHAQTST 268 >gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1 isoform a [Homo sapiens] Length = 332 Score = 511 bits (1315), Expect = e-145 Identities = 240/249 (96%), Positives = 244/249 (97%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK Sbjct: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 Query: 61 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN 120 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN Sbjct: 61 RVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSN 120 Query: 121 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI 180 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI Sbjct: 121 DTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPI 180 Query: 181 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREYEKN 240 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMD+VRE+E+ Sbjct: 181 MCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERA 240 Query: 241 MHEQTNIKV 249 E TN K+ Sbjct: 241 TQEATNKKI 249 >gi|24308237 phosphatidylinositol transfer protein, membrane-associated 2 [Homo sapiens] Length = 1349 Score = 234 bits (598), Expect = 5e-62 Identities = 115/277 (41%), Positives = 175/277 (63%), Gaps = 10/277 (3%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQS-DRGEGVEVVQNEPFEDPHHGNGQFTE 59 M++KEYRI +P+TV+EY+I QLYMI K S ++ G GVE+++N P+ D G+GQ+T Sbjct: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60 Query: 60 KRVYLNSKLPSWARAVVPKI-FYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKG 118 K ++ +PSW R+++PK V E++WN YPYT T +TC F+ KFSI IET Y+ + G Sbjct: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120 Query: 119 SNDTIFD-NEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177 N +F+ + + + + FIDI D +P YK EDPK F+S KT RG L E W + + Sbjct: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180 Query: 178 Q----PIMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMD 232 + PIMC+YKL V+F WG+Q+++E+F+H +R +++ HRQA+ W DEWY ++M+ Sbjct: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240 Query: 233 DVREYEKNMHEQTNIKVC--NQHSSPVDDIESHAQTS 267 ++RE EK + K+ N+ ++ H S Sbjct: 241 NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVS 277 >gi|195927017 phosphatidylinositol transfer protein, membrane-associated isoform b [Homo sapiens] Length = 1243 Score = 221 bits (563), Expect = 5e-58 Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 7/246 (2%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSD-RGEGVEVVQNEPFEDPHHGNGQFTE 59 ML+KEY I +P+++DEY++ QLYMI K S E+S G GVE++ N P+ D G+GQ+T Sbjct: 1 MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTH 60 Query: 60 KRVYLNSKLPSWARAVVPKI-FYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKG 118 K ++ S +P W RA++PK V E++WN YPYT T YTC F+ KFSI IET Y + G Sbjct: 61 KVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGG 120 Query: 119 SNDTIFD-NEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGW-RDS 176 +F+ + A+ +R + IDI D + YK EDP+ + S KTGRG L + W R + Sbjct: 121 QQPNVFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWARTA 180 Query: 177 HQ--PIMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMDD 233 Q P+MC+YKL V+F WG+Q ++EQF+H V +R ++L HRQA+ W DEW +++M D Sbjct: 181 AQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTELSMAD 240 Query: 234 VREYEK 239 +R E+ Sbjct: 241 IRALEE 246 >gi|195927015 phosphatidylinositol transfer protein, membrane-associated isoform a [Homo sapiens] Length = 1244 Score = 221 bits (563), Expect = 5e-58 Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 7/246 (2%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSD-RGEGVEVVQNEPFEDPHHGNGQFTE 59 ML+KEY I +P+++DEY++ QLYMI K S E+S G GVE++ N P+ D G+GQ+T Sbjct: 1 MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTH 60 Query: 60 KRVYLNSKLPSWARAVVPKI-FYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKG 118 K ++ S +P W RA++PK V E++WN YPYT T YTC F+ KFSI IET Y + G Sbjct: 61 KVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGG 120 Query: 119 SNDTIFD-NEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGW-RDS 176 +F+ + A+ +R + IDI D + YK EDP+ + S KTGRG L + W R + Sbjct: 121 QQPNVFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWARTA 180 Query: 177 HQ--PIMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMDD 233 Q P+MC+YKL V+F WG+Q ++EQF+H V +R ++L HRQA+ W DEW +++M D Sbjct: 181 AQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTELSMAD 240 Query: 234 VREYEK 239 +R E+ Sbjct: 241 IRALEE 246 >gi|5453908 phosphatidylinositol transfer protein, alpha [Homo sapiens] Length = 270 Score = 204 bits (518), Expect = 9e-53 Identities = 109/253 (43%), Positives = 157/253 (62%), Gaps = 10/253 (3%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 +LLKEYR+ +P++VDEY++GQLY +++ S ++ GEGVEV+ NEP+E GQ+T K Sbjct: 2 VLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGE-KGQYTHK 60 Query: 61 RVYLNSKLPSWARAVVPK-IFYVTEKAWNYYPYTITEYTCSFLPK-FSIHIETKYEDNKG 118 +L SK+P++ R + P+ + EKAWN YPY T T ++ + F I IET ++ + G Sbjct: 61 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG 120 Query: 119 SNDTIFDNEAKDVER-EVCFIDIAC-DEIPERYYKESEDPKHFKSEKTGRGQLREGWRDS 176 + + + E + + E +IDIA ++ + YK EDP FKS KTGRG L W+ Sbjct: 121 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE 180 Query: 177 -----HQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTM 231 P MC+YKLVTVKF+ WGLQ +VE F+HK R + HRQ F W+D+W D+TM Sbjct: 181 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM 240 Query: 232 DDVREYEKNMHEQ 244 DD+R E+ Q Sbjct: 241 DDIRRMEEETKRQ 253 >gi|6912594 phosphatidylinositol transfer protein, beta [Homo sapiens] Length = 271 Score = 183 bits (464), Expect = 2e-46 Identities = 102/257 (39%), Positives = 155/257 (60%), Gaps = 18/257 (7%) Query: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEK 60 +L+KE+R+ +P +V EY++GQLY +++ S ++ GEG+EV++NEP+E GQ+T K Sbjct: 2 VLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGE-KGQYTHK 60 Query: 61 RVYLNSKLPSWARAVVPK---IFYVTEKAWNYYPYTITEYTCSFLPK-FSIHIETKYEDN 116 +L SK+P++ R + P+ +F+ EKAWN YPY T T ++ F I IET ++ + Sbjct: 61 IYHLKSKVPAFVRMIAPEGSLVFH--EKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPD 118 Query: 117 KGSNDTIFD---NEAKDVEREVCFIDIAC-DEIPERYYKESEDPKHFKSEKTGRGQLREG 172 G+ + + N K VE + IDIA ++ YK EDP F+S KT RG L Sbjct: 119 LGTLENVHGLDPNTWKTVE--IVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPN 176 Query: 173 WRDSHQ-----PIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWY 227 W+ P MC+YKLVT+KF+ WGLQ++VE F+ K + I HRQ F W+D+W Sbjct: 177 WKKELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWI 236 Query: 228 DMTMDDVREYEKNMHEQ 244 D+TM+D+R E ++ Sbjct: 237 DLTMEDIRRMEDETQKE 253 >gi|22202619 cathepsin L1 preproprotein [Homo sapiens] Length = 333 Score = 30.0 bits (66), Expect = 2.2 Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 90 YPYTITEYTCSFLPKFSIHIETKYED 115 YPY TE +C + PK+S+ +T + D Sbjct: 202 YPYEATEESCKYNPKYSVANDTGFVD 227 >gi|4503155 cathepsin L1 preproprotein [Homo sapiens] Length = 333 Score = 30.0 bits (66), Expect = 2.2 Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 90 YPYTITEYTCSFLPKFSIHIETKYED 115 YPY TE +C + PK+S+ +T + D Sbjct: 202 YPYEATEESCKYNPKYSVANDTGFVD 227 >gi|45269133 glial cells missing homolog a [Homo sapiens] Length = 436 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 68 LPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPK------FSIHIETKYEDNKGSND 121 L +W++ ++ + ++ YP+ +T + CSF P F + + K Sbjct: 294 LQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCP 353 Query: 122 TIFDNEAKDVEREVCFIDIACDEIPERYYKESEDP 156 ++ N A ++ E +D Y+ EDP Sbjct: 354 PLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDP 388 >gi|125490354 spermatogenesis associated 1 [Homo sapiens] Length = 459 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 64 LNSKLPSWARAVVPKIFYVTEKAWNYYPYTI-TEYTCSFL 102 LN PS + V +FYV E +WNY TI TE F+ Sbjct: 25 LNPSRPSSSELVELHVFYVPEGSWNYKLNTISTEVVNKFI 64 >gi|222446611 R-spondin family, member 2 [Homo sapiens] Length = 243 Score = 28.9 bits (63), Expect = 4.9 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 182 CSYKLVTVKFEVWGLQTRVEQFVHKVVRDILL 213 CS T F+ WGL+TR Q V K V+D +L Sbjct: 156 CSRNNRTCGFK-WGLETRTRQIVKKPVKDTIL 186 >gi|148839350 hypothetical protein LOC25858 [Homo sapiens] Length = 200 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 109 IETKYEDNKGSNDTIFDNEAKDVEREVCF----IDIACDEIPERYYKESEDPKHFKS-EK 163 + K D +GS++ ++ +D+ +++ E+ E + +E + + Sbjct: 8 VSLKSSDRQGSDEESVHSDTRDLWTTTTLSQAQLNMPLSEVCEGFDEEGRNISKTRGWHS 67 Query: 164 TGRGQLREGWRDSHQP 179 GRG L EG++ SH+P Sbjct: 68 PGRGSLDEGYKASHKP 83 >gi|109715862 gem (nuclear organelle) associated protein 8 [Homo sapiens] Length = 242 Score = 28.5 bits (62), Expect = 6.4 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%) Query: 74 AVVPKIFYVTEKAWNYYPYTITEYTCSFL-PKFSIHIE-TKYEDNKGSNDTIFDNEAKDV 131 A P+ FY AW YP + + + S P++S I+ + ED S + + E+ D Sbjct: 70 AAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETES-DA 128 Query: 132 EREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177 E E ++ E +Y+ E+E + E+ + QL DS+ Sbjct: 129 EVECDLSNMEITEELRQYFAETE---RHREERRRQQQLDAERLDSY 171 >gi|109715864 gem (nuclear organelle) associated protein 8 [Homo sapiens] Length = 242 Score = 28.5 bits (62), Expect = 6.4 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%) Query: 74 AVVPKIFYVTEKAWNYYPYTITEYTCSFL-PKFSIHIE-TKYEDNKGSNDTIFDNEAKDV 131 A P+ FY AW YP + + + S P++S I+ + ED S + + E+ D Sbjct: 70 AAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETES-DA 128 Query: 132 EREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177 E E ++ E +Y+ E+E + E+ + QL DS+ Sbjct: 129 EVECDLSNMEITEELRQYFAETE---RHREERRRQQQLDAERLDSY 171 >gi|8923481 gem (nuclear organelle) associated protein 8 [Homo sapiens] Length = 242 Score = 28.5 bits (62), Expect = 6.4 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%) Query: 74 AVVPKIFYVTEKAWNYYPYTITEYTCSFL-PKFSIHIE-TKYEDNKGSNDTIFDNEAKDV 131 A P+ FY AW YP + + + S P++S I+ + ED S + + E+ D Sbjct: 70 AAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETES-DA 128 Query: 132 EREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177 E E ++ E +Y+ E+E + E+ + QL DS+ Sbjct: 129 EVECDLSNMEITEELRQYFAETE---RHREERRRQQQLDAERLDSY 171 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,746,903 Number of Sequences: 37866 Number of extensions: 480915 Number of successful extensions: 1031 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 997 Number of HSP's gapped (non-prelim): 16 length of query: 268 length of database: 18,247,518 effective HSP length: 100 effective length of query: 168 effective length of database: 14,460,918 effective search space: 2429434224 effective search space used: 2429434224 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.