Guide to the Human Genome
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Search of human proteins with 31543093

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]
         (636 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]              1312   0.0  
gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]              744   0.0  
gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]           381   e-106
gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo...   381   e-106
gi|40255043 galactosidase, beta 1-like [Homo sapiens]                 377   e-104
gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo...   207   2e-53
gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]               32   2.3  
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   3.0  
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   3.0  
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   3.0  
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom...    31   3.0  
gi|226246682 prostaglandin reductase 2 [Homo sapiens]                  31   4.0  
gi|226246680 prostaglandin reductase 2 [Homo sapiens]                  31   4.0  
gi|22748929 prostaglandin reductase 2 [Homo sapiens]                   31   4.0  
gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ...    30   5.2  
gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ...    30   5.2  
gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo s...    30   5.2  
gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens]     30   5.2  
gi|41393561 leucine aminopeptidase 3 [Homo sapiens]                    30   6.8  

>gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]
          Length = 636

 Score = 1312 bits (3396), Expect = 0.0
 Identities = 636/636 (100%), Positives = 636/636 (100%)

Query: 1   MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST 60
           MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST
Sbjct: 1   MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST 60

Query: 61  FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF 120
           FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF
Sbjct: 61  FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF 120

Query: 121 VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS 180
           VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS
Sbjct: 121 VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS 180

Query: 181 RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG 240
           RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG
Sbjct: 181 RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG 240

Query: 241 IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK 300
           IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK
Sbjct: 241 IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK 300

Query: 301 TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK 360
           TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK
Sbjct: 301 TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK 360

Query: 361 LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV 420
           LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV
Sbjct: 361 LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV 420

Query: 421 NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV 480
           NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV
Sbjct: 421 NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV 480

Query: 481 LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS 540
           LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS
Sbjct: 481 LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS 540

Query: 541 LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP 600
           LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP
Sbjct: 541 LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP 600

Query: 601 WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK 636
           WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK
Sbjct: 601 WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK 636


>gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
          Length = 653

 Score =  744 bits (1922), Expect = 0.0
 Identities = 365/608 (60%), Positives = 442/608 (72%), Gaps = 11/608 (1%)

Query: 29  RLDWSTLVPLRLRHRQLGLQAKGW-----NFMLEDSTFWIFGGSIHYFRVPREYWRDRLL 83
           R +WS L PL L++R +GL  +       +F LE   F IFGGSIHYFRVPREYWRDRLL
Sbjct: 50  RFNWSHLTPLELKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLL 109

Query: 84  KMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGPYICSEM 143
           K+KACG NT+TTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG YICSEM
Sbjct: 110 KLKACGFNTVTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEM 169

Query: 144 DLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMSRVVPLQYKRGGPIIAVQVENEYG 203
           DLGGLPSWLLQDP + LRTT K F EAV+ YFDHL+ RV+PLQY++ GP+IAVQVENEYG
Sbjct: 170 DLGGLPSWLLQDPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYG 229

Query: 204 SYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKGIVQGVLATINLQSTHELQLLTTF 263
           S+NKD  YMPY+ KAL  RGIVELLLTSD +  +  G  +GVLA INLQ  H+     TF
Sbjct: 230 SFNKDKTYMPYLHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQ----DTF 285

Query: 264 --LFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGT 321
             L  VQ  +P ++MEYW GWFD WG  H++ D+ EV   VS  +    S N+YMFHGGT
Sbjct: 286 NQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGT 345

Query: 322 NFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLP 381
           NFGFMNGA +F  +   VTSYDYDAVLTEAGDYT KY+KL+  F S+S  PLP  P L P
Sbjct: 346 NFGFMNGATYFGKHSGIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPP 405

Query: 382 KMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPVNGGNGQSFGYILYETSITSSG 441
           K  Y P+ P LYL LWDAL YL EP++S +P+NMENLP+N G+GQS+G +LYE SI S G
Sbjct: 406 KAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGG 465

Query: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501
            L  H HD  QVF++   IG L+     + +P ++    LRILVEN+GRVN+   I +++
Sbjct: 466 RLRAHAHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQ 525

Query: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSSLPETPTLPAFFLGSLSISSTP 561
           KG+ G++ +N+S L+ F IYSL+MK SFF+R     W  +P++   PAF+ G+L    +P
Sbjct: 526 KGITGSVSINNSSLEGFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSP 585

Query: 562 CDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGPWLSSGINQVIVFEETMAGPAL 621
            DTFL L  W  G VFING+NLGRYWNIGPQKTLYLPG WL    N+VI+FE+ M+G  +
Sbjct: 586 KDTFLSLLNWNYGFVFINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDI 645

Query: 622 QFTETPHL 629
           + T+ P L
Sbjct: 646 KSTDKPTL 653


>gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]
          Length = 647

 Score =  381 bits (979), Expect = e-106
 Identities = 235/591 (39%), Positives = 329/591 (55%), Gaps = 40/591 (6%)

Query: 53  NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFS 112
           +F+ +   F    GSIHY RVPR YW+DRLLKMK  GLN + TYVPWN HEP  G++ FS
Sbjct: 10  SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFS 69

Query: 113 GNLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVD 172
            + D+E F+ +A E+GL VILRPGPYIC+E ++GGLP+WLL+   + LR++   +  AVD
Sbjct: 70  EDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVD 129

Query: 173 LYFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVKKALEDR-GIVELLLT 230
            +   L+ ++ PL Y+ GGP+I VQVENEYGSY   D  Y+ +++K      G   +L T
Sbjct: 130 KWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFT 189

Query: 231 SD--NKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGG 288
           +D  +K  L  G +QG+  T++  +   +          +   P +  E++TGW D WG 
Sbjct: 190 TDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQ 249

Query: 289 PHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVL 348
           PH+ + +  V  ++  I+  G+S+NLYMF GGTNF + NGA     Y +  TSYDYDA L
Sbjct: 250 PHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPL 307

Query: 349 TEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEP 406
           +EAGD T KY  LR+       +P  P P   PK  Y  +T     ++  AL  L    P
Sbjct: 308 SEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGP 367

Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SGILSGHVHDRGQVFVNTV 458
           IKS  P+    +       Q +G++LY T++          S  L+G VHDR  V V+ +
Sbjct: 368 IKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNG-VHDRAYVAVDGI 420

Query: 459 SIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNF 518
             G L+           +    L +LVEN GRVNYG  I+D  KGL+ NL L+ + L ++
Sbjct: 421 PQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-FKGLVSNLTLSSNILTDW 479

Query: 519 RIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFFLGSLSISS----TPCDT 564
            I+ LD + +     G           + W+      TLPAF++G+ SI S     P DT
Sbjct: 480 TIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDT 539

Query: 565 FLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSGINQVIVFE 613
           F++  GW KG V+ING NLGRYW   GPQ TL++P   L +S  N + V E
Sbjct: 540 FIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLE 590


>gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo
           sapiens]
          Length = 677

 Score =  381 bits (979), Expect = e-106
 Identities = 235/591 (39%), Positives = 329/591 (55%), Gaps = 40/591 (6%)

Query: 53  NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFS 112
           +F+ +   F    GSIHY RVPR YW+DRLLKMK  GLN + TYVPWN HEP  G++ FS
Sbjct: 40  SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFS 99

Query: 113 GNLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVD 172
            + D+E F+ +A E+GL VILRPGPYIC+E ++GGLP+WLL+   + LR++   +  AVD
Sbjct: 100 EDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVD 159

Query: 173 LYFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVKKALEDR-GIVELLLT 230
            +   L+ ++ PL Y+ GGP+I VQVENEYGSY   D  Y+ +++K      G   +L T
Sbjct: 160 KWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFT 219

Query: 231 SD--NKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGG 288
           +D  +K  L  G +QG+  T++  +   +          +   P +  E++TGW D WG 
Sbjct: 220 TDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQ 279

Query: 289 PHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVL 348
           PH+ + +  V  ++  I+  G+S+NLYMF GGTNF + NGA     Y +  TSYDYDA L
Sbjct: 280 PHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPL 337

Query: 349 TEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEP 406
           +EAGD T KY  LR+       +P  P P   PK  Y  +T     ++  AL  L    P
Sbjct: 338 SEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGP 397

Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SGILSGHVHDRGQVFVNTV 458
           IKS  P+    +       Q +G++LY T++          S  L+G VHDR  V V+ +
Sbjct: 398 IKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNG-VHDRAYVAVDGI 450

Query: 459 SIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNF 518
             G L+           +    L +LVEN GRVNYG  I+D  KGL+ NL L+ + L ++
Sbjct: 451 PQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-FKGLVSNLTLSSNILTDW 509

Query: 519 RIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFFLGSLSISS----TPCDT 564
            I+ LD + +     G           + W+      TLPAF++G+ SI S     P DT
Sbjct: 510 TIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDT 569

Query: 565 FLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSGINQVIVFE 613
           F++  GW KG V+ING NLGRYW   GPQ TL++P   L +S  N + V E
Sbjct: 570 FIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLE 620


>gi|40255043 galactosidase, beta 1-like [Homo sapiens]
          Length = 654

 Score =  377 bits (969), Expect = e-104
 Identities = 239/597 (40%), Positives = 331/597 (55%), Gaps = 32/597 (5%)

Query: 54  FMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSG 113
           F+L+ + F    GS+HYFRVPR  W DRLLKM+  GLN +  YVPWN HEP+ G ++F+G
Sbjct: 39  FLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRWSGLNAIQFYVPWNYHEPQPGVYNFNG 98

Query: 114 NLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDL 173
           + DL AF+  AA   L VILRPGPYIC+E ++GGLPSWLL+ P + LRT+   F  AVD 
Sbjct: 99  SRDLIAFLNEAALANLLVILRPGPYICAEWEMGGLPSWLLRKPEIHLRTSDPDFLAAVDS 158

Query: 174 YFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVK---KALEDRGIVELLL 229
           +F  L+ ++ P  Y  GG II++QVENEYGSY   D +YM ++    +AL    I  LL 
Sbjct: 159 WFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDFSYMRHLAGLFRALLGEKI--LLF 216

Query: 230 TSDNKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGP 289
           T+D  +GL  G ++G+  T++      +  + T L   +   P +  EY+TGW D WG  
Sbjct: 217 TTDGPEGLKCGSLRGLYTTVDFGPADNMTKIFTLLRKYEPHGPLVNSEYYTGWLDYWGQN 276

Query: 290 HNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLT 349
           H+    S V K +  ++  G+S+N+YMFHGGTNFG+ NGA     +    TSYDYDA ++
Sbjct: 277 HSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGADKKGRFLPITTSYDYDAPIS 336

Query: 350 EAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVL---YLSLWDALKYLGEP 406
           EAGD T K   LRD       +PL P P   PKM   P+T  L    L+  D L   G P
Sbjct: 337 EAGDPTPKLFALRDVISKFQEVPLGPLPPPSPKMMLGPVTLHLVGHLLAFLDLLCPRG-P 395

Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITSS-------GILSGHVHDRGQVFVNTVS 459
           I S  P+  E +       Q  G++LY T +T +        + +  VHDR  V V+ V 
Sbjct: 396 IHSILPMTFEAVK------QDHGFMLYRTYMTHTIFEPTPFWVPNNGVHDRAYVMVDGVF 449

Query: 460 IGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFR 519
            G ++           +  + L ILVEN GR+++G N  D  KGL+    L  + L  + 
Sbjct: 450 QGVVERNMRDKLFLTGKLGSKLDILVENMGRLSFGSNSSD-FKGLLKPPILGQTILTQWM 508

Query: 520 IYSL--DMKKSFFQRFGLDKWSSLPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVF 577
           ++ L  D    ++    L KW   P+ P+ P F+  +  I  +  DTFL L GW KG V+
Sbjct: 509 MFPLKIDNLVKWWFPLQLPKW-PYPQAPSGPTFYSKTFPILGSVGDTFLYLPGWTKGQVW 567

Query: 578 INGQNLGRYW-NIGPQKTLYLPGPWL--SSGINQV--IVFEETMAGPALQFTETPHL 629
           ING NLGRYW   GPQ+TLY+P   L     +N++  +  E+    P +QF + P L
Sbjct: 568 INGFNLGRYWTKQGPQQTLYVPRFLLFPRGALNKITLLELEDVPLQPQVQFLDKPIL 624


>gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo
           sapiens]
          Length = 546

 Score =  207 bits (527), Expect = 2e-53
 Identities = 139/368 (37%), Positives = 192/368 (52%), Gaps = 36/368 (9%)

Query: 272 PKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMH 331
           P +  E++TGW D WG PH+ + +  V  ++  I+  G+S+NLYMF GGTNF + NGA  
Sbjct: 132 PLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN- 190

Query: 332 FHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPV 391
              Y +  TSYDYDA L+EAGD T KY  LR+       +P  P P   PK  Y  +T  
Sbjct: 191 -SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLE 249

Query: 392 LYLSLWDALKYL--GEPIKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SG 441
              ++  AL  L    PIKS  P+    +       Q +G++LY T++          S 
Sbjct: 250 KLKTVGAALDILCPSGPIKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSS 303

Query: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501
            L+G VHDR  V V+ +  G L+           +    L +LVEN GRVNYG  I+D  
Sbjct: 304 PLNG-VHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-F 361

Query: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFF 551
           KGL+ NL L+ + L ++ I+ LD + +     G           + W+      TLPAF+
Sbjct: 362 KGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFY 421

Query: 552 LGSLSISS----TPCDTFLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSG 605
           +G+ SI S     P DTF++  GW KG V+ING NLGRYW   GPQ TL++P   L +S 
Sbjct: 422 MGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSA 481

Query: 606 INQVIVFE 613
            N + V E
Sbjct: 482 PNTITVLE 489



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query: 53 NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTT 95
          +F+ +   F    GSIHY RVPR YW+DRLLKMK  GLN + T
Sbjct: 40 SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82


>gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]
          Length = 192

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 371 IPLPPPPDLLPKMPYEPLTPVLYLSLWDA 399
           +P PP P + P  P  P+ P L+L  W A
Sbjct: 154 LPQPPLPPMFPLRPLPPILPDLHLEAWPA 182


>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396
           G + G+P PPPP  LP     P +PV   +L
Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448


>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396
           G + G+P PPPP  LP     P +PV   +L
Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448


>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396
           G + G+P PPPP  LP     P +PV   +L
Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448


>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396
           G + G+P PPPP  LP     P +PV   +L
Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448


>gi|226246682 prostaglandin reductase 2 [Homo sapiens]
          Length = 351

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223
           VD+YFD++   +S  V  Q      II      +   YNKD  Y P +  A+E    +R 
Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281

Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243
           I  E  L  + KD    GI+Q
Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302


>gi|226246680 prostaglandin reductase 2 [Homo sapiens]
          Length = 351

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223
           VD+YFD++   +S  V  Q      II      +   YNKD  Y P +  A+E    +R 
Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281

Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243
           I  E  L  + KD    GI+Q
Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302


>gi|22748929 prostaglandin reductase 2 [Homo sapiens]
          Length = 351

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223
           VD+YFD++   +S  V  Q      II      +   YNKD  Y P +  A+E    +R 
Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281

Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243
           I  E  L  + KD    GI+Q
Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302


>gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
           sapiens]
          Length = 205

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 372 PLPPPPDLLPKMPYEPLTPVL 392
           PLPP P L P  P +PL P+L
Sbjct: 165 PLPPQPPLPPMFPMQPLPPML 185


>gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo
           sapiens]
          Length = 175

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 372 PLPPPPDLLPKMPYEPLTPVL 392
           PLPP P L P  P +PL P+L
Sbjct: 135 PLPPQPPLPPMFPMQPLPPML 155


>gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo
           sapiens]
          Length = 191

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 372 PLPPPPDLLPKMPYEPLTPVL 392
           PLPP P L P  P +PL P+L
Sbjct: 151 PLPPQPPLPPMFPMQPLPPML 171


>gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens]
          Length = 743

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 503 GLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSSLPETPTLPAF 550
           G +GNL+  D PL      S  +K+ + Q   LD+  S   TP LPAF
Sbjct: 202 GRMGNLHTWDGPLPP----SWHIKQLYLQHRVLDQMRSFGMTPVLPAF 245


>gi|41393561 leucine aminopeptidase 3 [Homo sapiens]
          Length = 519

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 569 EGWEKGVVFINGQNLGR 585
           E W+KGV+F +GQNL R
Sbjct: 184 EAWQKGVLFASGQNLAR 200


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.141    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,803,948
Number of Sequences: 37866
Number of extensions: 1230925
Number of successful extensions: 3367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3326
Number of HSP's gapped (non-prelim): 24
length of query: 636
length of database: 18,247,518
effective HSP length: 109
effective length of query: 527
effective length of database: 14,120,124
effective search space: 7441305348
effective search space used: 7441305348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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