BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens] (636 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens] 1312 0.0 gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens] 744 0.0 gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens] 381 e-106 gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo... 381 e-106 gi|40255043 galactosidase, beta 1-like [Homo sapiens] 377 e-104 gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo... 207 2e-53 gi|4502073 amelogenin, Y-linked precursor [Homo sapiens] 32 2.3 gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 3.0 gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 3.0 gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 3.0 gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 31 3.0 gi|226246682 prostaglandin reductase 2 [Homo sapiens] 31 4.0 gi|226246680 prostaglandin reductase 2 [Homo sapiens] 31 4.0 gi|22748929 prostaglandin reductase 2 [Homo sapiens] 31 4.0 gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ... 30 5.2 gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ... 30 5.2 gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo s... 30 5.2 gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens] 30 5.2 gi|41393561 leucine aminopeptidase 3 [Homo sapiens] 30 6.8 >gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens] Length = 636 Score = 1312 bits (3396), Expect = 0.0 Identities = 636/636 (100%), Positives = 636/636 (100%) Query: 1 MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST 60 MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST Sbjct: 1 MTTWSLRRRPARTLGLLLLVVLGFLVLRRLDWSTLVPLRLRHRQLGLQAKGWNFMLEDST 60 Query: 61 FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF 120 FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF Sbjct: 61 FWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAF 120 Query: 121 VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS 180 VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS Sbjct: 121 VLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMS 180 Query: 181 RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG 240 RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG Sbjct: 181 RVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKG 240 Query: 241 IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK 300 IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK Sbjct: 241 IVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLK 300 Query: 301 TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK 360 TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK Sbjct: 301 TVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMK 360 Query: 361 LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV 420 LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV Sbjct: 361 LRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPV 420 Query: 421 NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV 480 NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV Sbjct: 421 NGGNGQSFGYILYETSITSSGILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTV 480 Query: 481 LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS 540 LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS Sbjct: 481 LRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSS 540 Query: 541 LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP 600 LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP Sbjct: 541 LPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGP 600 Query: 601 WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK 636 WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK Sbjct: 601 WLSSGINQVIVFEETMAGPALQFTETPHLGRNQYIK 636 >gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens] Length = 653 Score = 744 bits (1922), Expect = 0.0 Identities = 365/608 (60%), Positives = 442/608 (72%), Gaps = 11/608 (1%) Query: 29 RLDWSTLVPLRLRHRQLGLQAKGW-----NFMLEDSTFWIFGGSIHYFRVPREYWRDRLL 83 R +WS L PL L++R +GL + +F LE F IFGGSIHYFRVPREYWRDRLL Sbjct: 50 RFNWSHLTPLELKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLL 109 Query: 84 KMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGPYICSEM 143 K+KACG NT+TTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG YICSEM Sbjct: 110 KLKACGFNTVTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEM 169 Query: 144 DLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMSRVVPLQYKRGGPIIAVQVENEYG 203 DLGGLPSWLLQDP + LRTT K F EAV+ YFDHL+ RV+PLQY++ GP+IAVQVENEYG Sbjct: 170 DLGGLPSWLLQDPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYG 229 Query: 204 SYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKGIVQGVLATINLQSTHELQLLTTF 263 S+NKD YMPY+ KAL RGIVELLLTSD + + G +GVLA INLQ H+ TF Sbjct: 230 SFNKDKTYMPYLHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQ----DTF 285 Query: 264 --LFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGT 321 L VQ +P ++MEYW GWFD WG H++ D+ EV VS + S N+YMFHGGT Sbjct: 286 NQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGT 345 Query: 322 NFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLP 381 NFGFMNGA +F + VTSYDYDAVLTEAGDYT KY+KL+ F S+S PLP P L P Sbjct: 346 NFGFMNGATYFGKHSGIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPP 405 Query: 382 KMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPVNGGNGQSFGYILYETSITSSG 441 K Y P+ P LYL LWDAL YL EP++S +P+NMENLP+N G+GQS+G +LYE SI S G Sbjct: 406 KAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGG 465 Query: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501 L H HD QVF++ IG L+ + +P ++ LRILVEN+GRVN+ I +++ Sbjct: 466 RLRAHAHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQ 525 Query: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSSLPETPTLPAFFLGSLSISSTP 561 KG+ G++ +N+S L+ F IYSL+MK SFF+R W +P++ PAF+ G+L +P Sbjct: 526 KGITGSVSINNSSLEGFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSP 585 Query: 562 CDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGPWLSSGINQVIVFEETMAGPAL 621 DTFL L W G VFING+NLGRYWNIGPQKTLYLPG WL N+VI+FE+ M+G + Sbjct: 586 KDTFLSLLNWNYGFVFINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDI 645 Query: 622 QFTETPHL 629 + T+ P L Sbjct: 646 KSTDKPTL 653 >gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens] Length = 647 Score = 381 bits (979), Expect = e-106 Identities = 235/591 (39%), Positives = 329/591 (55%), Gaps = 40/591 (6%) Query: 53 NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFS 112 +F+ + F GSIHY RVPR YW+DRLLKMK GLN + TYVPWN HEP G++ FS Sbjct: 10 SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFS 69 Query: 113 GNLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVD 172 + D+E F+ +A E+GL VILRPGPYIC+E ++GGLP+WLL+ + LR++ + AVD Sbjct: 70 EDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVD 129 Query: 173 LYFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVKKALEDR-GIVELLLT 230 + L+ ++ PL Y+ GGP+I VQVENEYGSY D Y+ +++K G +L T Sbjct: 130 KWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFT 189 Query: 231 SD--NKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGG 288 +D +K L G +QG+ T++ + + + P + E++TGW D WG Sbjct: 190 TDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQ 249 Query: 289 PHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVL 348 PH+ + + V ++ I+ G+S+NLYMF GGTNF + NGA Y + TSYDYDA L Sbjct: 250 PHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPL 307 Query: 349 TEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEP 406 +EAGD T KY LR+ +P P P PK Y +T ++ AL L P Sbjct: 308 SEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGP 367 Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SGILSGHVHDRGQVFVNTV 458 IKS P+ + Q +G++LY T++ S L+G VHDR V V+ + Sbjct: 368 IKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNG-VHDRAYVAVDGI 420 Query: 459 SIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNF 518 G L+ + L +LVEN GRVNYG I+D KGL+ NL L+ + L ++ Sbjct: 421 PQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-FKGLVSNLTLSSNILTDW 479 Query: 519 RIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFFLGSLSISS----TPCDT 564 I+ LD + + G + W+ TLPAF++G+ SI S P DT Sbjct: 480 TIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDT 539 Query: 565 FLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSGINQVIVFE 613 F++ GW KG V+ING NLGRYW GPQ TL++P L +S N + V E Sbjct: 540 FIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLE 590 >gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo sapiens] Length = 677 Score = 381 bits (979), Expect = e-106 Identities = 235/591 (39%), Positives = 329/591 (55%), Gaps = 40/591 (6%) Query: 53 NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFS 112 +F+ + F GSIHY RVPR YW+DRLLKMK GLN + TYVPWN HEP G++ FS Sbjct: 40 SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFS 99 Query: 113 GNLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVD 172 + D+E F+ +A E+GL VILRPGPYIC+E ++GGLP+WLL+ + LR++ + AVD Sbjct: 100 EDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVD 159 Query: 173 LYFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVKKALEDR-GIVELLLT 230 + L+ ++ PL Y+ GGP+I VQVENEYGSY D Y+ +++K G +L T Sbjct: 160 KWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFT 219 Query: 231 SD--NKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGG 288 +D +K L G +QG+ T++ + + + P + E++TGW D WG Sbjct: 220 TDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQ 279 Query: 289 PHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVL 348 PH+ + + V ++ I+ G+S+NLYMF GGTNF + NGA Y + TSYDYDA L Sbjct: 280 PHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPL 337 Query: 349 TEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEP 406 +EAGD T KY LR+ +P P P PK Y +T ++ AL L P Sbjct: 338 SEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGP 397 Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SGILSGHVHDRGQVFVNTV 458 IKS P+ + Q +G++LY T++ S L+G VHDR V V+ + Sbjct: 398 IKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNG-VHDRAYVAVDGI 450 Query: 459 SIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNF 518 G L+ + L +LVEN GRVNYG I+D KGL+ NL L+ + L ++ Sbjct: 451 PQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-FKGLVSNLTLSSNILTDW 509 Query: 519 RIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFFLGSLSISS----TPCDT 564 I+ LD + + G + W+ TLPAF++G+ SI S P DT Sbjct: 510 TIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDT 569 Query: 565 FLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSGINQVIVFE 613 F++ GW KG V+ING NLGRYW GPQ TL++P L +S N + V E Sbjct: 570 FIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLE 620 >gi|40255043 galactosidase, beta 1-like [Homo sapiens] Length = 654 Score = 377 bits (969), Expect = e-104 Identities = 239/597 (40%), Positives = 331/597 (55%), Gaps = 32/597 (5%) Query: 54 FMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSG 113 F+L+ + F GS+HYFRVPR W DRLLKM+ GLN + YVPWN HEP+ G ++F+G Sbjct: 39 FLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRWSGLNAIQFYVPWNYHEPQPGVYNFNG 98 Query: 114 NLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDL 173 + DL AF+ AA L VILRPGPYIC+E ++GGLPSWLL+ P + LRT+ F AVD Sbjct: 99 SRDLIAFLNEAALANLLVILRPGPYICAEWEMGGLPSWLLRKPEIHLRTSDPDFLAAVDS 158 Query: 174 YFDHLMSRVVPLQYKRGGPIIAVQVENEYGSYNK-DPAYMPYVK---KALEDRGIVELLL 229 +F L+ ++ P Y GG II++QVENEYGSY D +YM ++ +AL I LL Sbjct: 159 WFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDFSYMRHLAGLFRALLGEKI--LLF 216 Query: 230 TSDNKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGP 289 T+D +GL G ++G+ T++ + + T L + P + EY+TGW D WG Sbjct: 217 TTDGPEGLKCGSLRGLYTTVDFGPADNMTKIFTLLRKYEPHGPLVNSEYYTGWLDYWGQN 276 Query: 290 HNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLT 349 H+ S V K + ++ G+S+N+YMFHGGTNFG+ NGA + TSYDYDA ++ Sbjct: 277 HSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGADKKGRFLPITTSYDYDAPIS 336 Query: 350 EAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVL---YLSLWDALKYLGEP 406 EAGD T K LRD +PL P P PKM P+T L L+ D L G P Sbjct: 337 EAGDPTPKLFALRDVISKFQEVPLGPLPPPSPKMMLGPVTLHLVGHLLAFLDLLCPRG-P 395 Query: 407 IKSEKPINMENLPVNGGNGQSFGYILYETSITSS-------GILSGHVHDRGQVFVNTVS 459 I S P+ E + Q G++LY T +T + + + VHDR V V+ V Sbjct: 396 IHSILPMTFEAVK------QDHGFMLYRTYMTHTIFEPTPFWVPNNGVHDRAYVMVDGVF 449 Query: 460 IGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFR 519 G ++ + + L ILVEN GR+++G N D KGL+ L + L + Sbjct: 450 QGVVERNMRDKLFLTGKLGSKLDILVENMGRLSFGSNSSD-FKGLLKPPILGQTILTQWM 508 Query: 520 IYSL--DMKKSFFQRFGLDKWSSLPETPTLPAFFLGSLSISSTPCDTFLKLEGWEKGVVF 577 ++ L D ++ L KW P+ P+ P F+ + I + DTFL L GW KG V+ Sbjct: 509 MFPLKIDNLVKWWFPLQLPKW-PYPQAPSGPTFYSKTFPILGSVGDTFLYLPGWTKGQVW 567 Query: 578 INGQNLGRYW-NIGPQKTLYLPGPWL--SSGINQV--IVFEETMAGPALQFTETPHL 629 ING NLGRYW GPQ+TLY+P L +N++ + E+ P +QF + P L Sbjct: 568 INGFNLGRYWTKQGPQQTLYVPRFLLFPRGALNKITLLELEDVPLQPQVQFLDKPIL 624 >gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo sapiens] Length = 546 Score = 207 bits (527), Expect = 2e-53 Identities = 139/368 (37%), Positives = 192/368 (52%), Gaps = 36/368 (9%) Query: 272 PKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMH 331 P + E++TGW D WG PH+ + + V ++ I+ G+S+NLYMF GGTNF + NGA Sbjct: 132 PLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN- 190 Query: 332 FHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPV 391 Y + TSYDYDA L+EAGD T KY LR+ +P P P PK Y +T Sbjct: 191 -SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLE 249 Query: 392 LYLSLWDALKYL--GEPIKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SG 441 ++ AL L PIKS P+ + Q +G++LY T++ S Sbjct: 250 KLKTVGAALDILCPSGPIKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSS 303 Query: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501 L+G VHDR V V+ + G L+ + L +LVEN GRVNYG I+D Sbjct: 304 PLNG-VHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-F 361 Query: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFF 551 KGL+ NL L+ + L ++ I+ LD + + G + W+ TLPAF+ Sbjct: 362 KGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFY 421 Query: 552 LGSLSISS----TPCDTFLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSG 605 +G+ SI S P DTF++ GW KG V+ING NLGRYW GPQ TL++P L +S Sbjct: 422 MGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSA 481 Query: 606 INQVIVFE 613 N + V E Sbjct: 482 PNTITVLE 489 Score = 54.3 bits (129), Expect = 3e-07 Identities = 24/43 (55%), Positives = 29/43 (67%) Query: 53 NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTT 95 +F+ + F GSIHY RVPR YW+DRLLKMK GLN + T Sbjct: 40 SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82 >gi|4502073 amelogenin, Y-linked precursor [Homo sapiens] Length = 192 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 371 IPLPPPPDLLPKMPYEPLTPVLYLSLWDA 399 +P PP P + P P P+ P L+L W A Sbjct: 154 LPQPPLPPMFPLRPLPPILPDLHLEAWPA 182 >gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396 G + G+P PPPP LP P +PV +L Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448 >gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396 G + G+P PPPP LP P +PV +L Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448 >gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396 G + G+P PPPP LP P +PV +L Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448 >gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 366 GSISGIPLPPPPDLLPKMPYEPLTPVLYLSL 396 G + G+P PPPP LP P +PV +L Sbjct: 418 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTAL 448 >gi|226246682 prostaglandin reductase 2 [Homo sapiens] Length = 351 Score = 30.8 bits (68), Expect = 4.0 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223 VD+YFD++ +S V Q II + YNKD Y P + A+E +R Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281 Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243 I E L + KD GI+Q Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302 >gi|226246680 prostaglandin reductase 2 [Homo sapiens] Length = 351 Score = 30.8 bits (68), Expect = 4.0 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223 VD+YFD++ +S V Q II + YNKD Y P + A+E +R Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281 Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243 I E L + KD GI+Q Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302 >gi|22748929 prostaglandin reductase 2 [Homo sapiens] Length = 351 Score = 30.8 bits (68), Expect = 4.0 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Query: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223 VD+YFD++ +S V Q II + YNKD Y P + A+E +R Sbjct: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281 Query: 224 IV-ELLLTSDNKDGLSKGIVQ 243 I E L + KD GI+Q Sbjct: 282 ITRERFLVLNYKDKFEPGILQ 302 >gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo sapiens] Length = 205 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 372 PLPPPPDLLPKMPYEPLTPVL 392 PLPP P L P P +PL P+L Sbjct: 165 PLPPQPPLPPMFPMQPLPPML 185 >gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo sapiens] Length = 175 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 372 PLPPPPDLLPKMPYEPLTPVL 392 PLPP P L P P +PL P+L Sbjct: 135 PLPPQPPLPPMFPMQPLPPML 155 >gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo sapiens] Length = 191 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 372 PLPPPPDLLPKMPYEPLTPVL 392 PLPP P L P P +PL P+L Sbjct: 151 PLPPQPPLPPMFPMQPLPPML 171 >gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens] Length = 743 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 503 GLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSSLPETPTLPAF 550 G +GNL+ D PL S +K+ + Q LD+ S TP LPAF Sbjct: 202 GRMGNLHTWDGPLPP----SWHIKQLYLQHRVLDQMRSFGMTPVLPAF 245 >gi|41393561 leucine aminopeptidase 3 [Homo sapiens] Length = 519 Score = 30.0 bits (66), Expect = 6.8 Identities = 11/17 (64%), Positives = 14/17 (82%) Query: 569 EGWEKGVVFINGQNLGR 585 E W+KGV+F +GQNL R Sbjct: 184 EAWQKGVLFASGQNLAR 200 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.141 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,803,948 Number of Sequences: 37866 Number of extensions: 1230925 Number of successful extensions: 3367 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 3326 Number of HSP's gapped (non-prelim): 24 length of query: 636 length of database: 18,247,518 effective HSP length: 109 effective length of query: 527 effective length of database: 14,120,124 effective search space: 7441305348 effective search space used: 7441305348 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.