Guide to the Human Genome
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Name: PTGR2 Sequence: fasta or formatted (351aa) NCBI GI: 226246680
Description:

prostaglandin reductase 2

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes

Other entries for this name:
alt mRNA [351aa] prostaglandin reductase 2
alt mRNA [351aa] prostaglandin reductase 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         15           2
 C cysteine            2.3          8           1
 D aspartate           4.6         16           1
 E glutamate           6.6         23           2
 F phenylalanine       3.1         11           1
 G glycine            10.5         37           3
 H histidine           1.7          6           1
 I isoleucine          8.5         30           2
 K lysine              5.4         19           2
 L leucine             7.7         27           2
 M methionine          2.8         10           2
 N asparagine          6.3         22           1
 P proline             4.3         15           3
 Q glutamine           5.1         18           1
 R arginine            3.1         11           1
 S serine              6.6         23           1
 T threonine           4.8         17           1
 V valine              8.0         28           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin reductase 2 
PTGR2                 1.000   prostaglandin reductase 2 
PTGR2                 1.000   prostaglandin reductase 2 
PTGR1                 0.258   prostaglandin reductase 1 isoform 1 
PTGR1                 0.258   prostaglandin reductase 1 isoform 1 
PTGR1                 0.205   prostaglandin reductase 1 isoform 2 
ZADH2                 0.096   zinc binding alcohol dehydrogenase domain containing...
RTN4IP1               0.022   reticulon 4 interacting protein 1 precursor 
TP53I3                0.016   tumor protein p53 inducible protein 3 
TP53I3                0.016   tumor protein p53 inducible protein 3 
VAT1                  0.013   vesicle amine transport protein 1 
FAM36A                0.010   hypothetical protein LOC116228 
RIOK1                 0.009   RIO kinase 1 isoform 1 
RIOK1                 0.009   RIO kinase 1 isoform 2 
GLB1L2                0.009   galactosidase, beta 1-like 2 
CCNL2                 0.009   cyclin L2 isoform D 
CCNL2                 0.009   cyclin L2 isoform C 
CCNL2                 0.009   cyclin L2 isoform B 
CCNL2                 0.009   cyclin L2 isoform A 
UBASH3A               0.004   ubiquitin associated and SH3 domain containing, A sh...
UBASH3A               0.004   ubiquitin associated and SH3 domain containing, A lon...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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