Guide to the Human Genome
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Name: GLB1L2 Sequence: fasta or formatted (636aa) NCBI GI: 31543093
Description:

galactosidase, beta 1-like 2

Referenced in:

Galactose and Lactose

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         22           2
 C cysteine            0.5          3           1
 D aspartate           5.0         32           2
 E glutamate           4.6         29           2
 F phenylalanine       5.0         32           2
 G glycine             9.3         59           2
 H histidine           1.9         12           1
 I isoleucine          5.2         33           2
 K lysine              4.9         31           2
 L leucine            13.2         84           4
 M methionine          2.8         18           1
 N asparagine          4.6         29           1
 P proline             6.0         38           4
 Q glutamine           3.1         20           1
 R arginine            4.7         30           3
 S serine              6.4         41           2
 T threonine           6.0         38           2
 V valine              6.0         38           2
 W tryptophan          2.5         16           1
 Y tyrosine            4.9         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galactosidase, beta 1-like 2 
GLB1L3                0.559   galactosidase, beta 1 like 3 
GLB1                  0.277   galactosidase, beta 1 isoform b 
GLB1                  0.277   galactosidase, beta 1 isoform a preproprotein [Homo...
GLB1L                 0.274   galactosidase, beta 1-like 
GLB1                  0.141   galactosidase, beta 1 isoform c preproprotein [Homo...
AMELY                 0.005   amelogenin, Y-linked precursor 
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Hom...
PTGR2                 0.005   prostaglandin reductase 2 
PTGR2                 0.005   prostaglandin reductase 2 
PTGR2                 0.005   prostaglandin reductase 2 
AMELX                 0.004   amelogenin (X chromosome) isoform 3 precursor 
AMELX                 0.004   amelogenin (X chromosome) isoform 2 precursor 
AMELX                 0.004   amelogenin (X chromosome) isoform 1 precursor 
NAGLU                 0.004   alpha-N-acetylglucosaminidase precursor 
LAP3                  0.004   leucine aminopeptidase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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