Guide to the Human Genome
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Name: COMTD1 Sequence: fasta or formatted (262aa) NCBI GI: 31542747
Description:

catechol-O-methyltransferase domain containing 1

Referenced in:

Catecholamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.6         33           2
 C cysteine            2.7          7           1
 D aspartate           5.0         13           1
 E glutamate           6.1         16           1
 F phenylalanine       1.9          5           1
 G glycine             6.9         18           2
 H histidine           0.8          2           1
 I isoleucine          2.3          6           1
 K lysine              3.1          8           2
 L leucine            17.9         47           2
 M methionine          1.5          4           2
 N asparagine          1.5          4           1
 P proline             6.9         18           2
 Q glutamine           4.6         12           1
 R arginine            9.5         25           2
 S serine              3.8         10           1
 T threonine           3.8         10           1
 V valine              5.7         15           2
 W tryptophan          1.5          4           1
 Y tyrosine            1.9          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   catechol-O-methyltransferase domain containing 1 [Ho... 
LRTOMT                0.046   leucine rich transmembrane and 0-methyltransferase ...
LRTOMT                0.046   leucine rich transmembrane and 0-methyltransferase ...
LRTOMT                0.046   leucine rich transmembrane and 0-methyltransferase ...
COMT                  0.030   catechol-O-methyltransferase isoform S-COMT 
COMT                  0.030   catechol-O-methyltransferase isoform MB-COMT 
COMT                  0.030   catechol-O-methyltransferase isoform MB-COMT 
COMT                  0.030   catechol-O-methyltransferase isoform MB-COMT 
LOC100293345          0.010   PREDICTED: hypothetical protein 
DNAJC3                0.008   DnaJ (Hsp40) homolog, subfamily C, member 3 
FASTKD5               0.008   FAST kinase domains 5 
UNC45B                0.006   cardiomyopathy associated 4 isoform 2 
UNC45B                0.006   cardiomyopathy associated 4 isoform 1 
SLC35D1               0.006   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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