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Search of human proteins with 31542658
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542658 fatty acyl CoA reductase 2 [Homo sapiens]
(515 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542658 fatty acyl CoA reductase 2 [Homo sapiens] 1043 0.0
gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens] 663 0.0
gi|239747878 PREDICTED: hypothetical protein isoform 2 [Homo sap... 140 2e-33
gi|239747880 PREDICTED: hypothetical protein isoform 1 [Homo sap... 122 6e-28
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 37 0.056
gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens] 32 1.1
gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens] 31 2.4
gi|170650615 protoporphyrinogen oxidase [Homo sapiens] 30 4.0
gi|4506001 protoporphyrinogen oxidase [Homo sapiens] 30 4.0
gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens] 30 5.3
gi|37588859 ring finger protein 41 isoform 2 [Homo sapiens] 30 5.3
gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens] 30 5.3
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 30 6.9
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 30 6.9
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 30 6.9
gi|7706457 A-kinase anchor protein 11 [Homo sapiens] 30 6.9
gi|42740907 clusterin isoform 2 [Homo sapiens] 29 9.0
gi|42716297 clusterin isoform 1 [Homo sapiens] 29 9.0
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 29 9.0
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 29 9.0
>gi|31542658 fatty acyl CoA reductase 2 [Homo sapiens]
Length = 515
Score = 1043 bits (2698), Expect = 0.0
Identities = 515/515 (100%), Positives = 515/515 (100%)
Query: 1 MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQIL 60
MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQIL
Sbjct: 1 MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQIL 60
Query: 61 DSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDT 120
DSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDT
Sbjct: 61 DSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDT 120
Query: 121 LRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDS 180
LRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDS
Sbjct: 121 LRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDS 180
Query: 181 LEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPF 240
LEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPF
Sbjct: 181 LEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPF 240
Query: 241 PGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKST 300
PGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKST
Sbjct: 241 PGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKST 300
Query: 301 LVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAP 360
LVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAP
Sbjct: 301 LVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAP 360
Query: 361 AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV 420
AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV
Sbjct: 361 AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV 420
Query: 421 FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWR 480
FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWR
Sbjct: 421 FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWR 480
Query: 481 LLIARSQMARNVWFFIVSFCYKFLSYFRASSTLKV 515
LLIARSQMARNVWFFIVSFCYKFLSYFRASSTLKV
Sbjct: 481 LLIARSQMARNVWFFIVSFCYKFLSYFRASSTLKV 515
>gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens]
Length = 515
Score = 663 bits (1710), Expect = 0.0
Identities = 304/514 (59%), Positives = 403/514 (78%)
Query: 1 MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQIL 60
M +I +Y GK++L+TGATGFLGKVL+EKL R+ P + +Y+LVR KAGQT Q+RV ++L
Sbjct: 1 MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60
Query: 61 DSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDT 120
KLF+++++ P+ EKI AI ++L Q A+S+ED + ++ TNIIFHCAATVRF++
Sbjct: 61 SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN 120
Query: 121 LRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDS 180
LR AVQLNV ATRQL+L+A QM LE F+H+STAY+ CN KHIDEV+YP PV+PKK+IDS
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS 180
Query: 181 LEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPF 240
LEW+DD ++++ITPKLI D PN Y YTKAL E VVQQE LN+AI+RPSIVGA+W+EPF
Sbjct: 181 LEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPF 240
Query: 241 PGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKST 300
PGW+DN NGP+G+ IA GKG LR I+A+ A+AD++PVD VVN+ LA WY+ V+RP++
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNI 300
Query: 301 LVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAP 360
+VY+ T+G+ NP +W ++ V++TF++ P E+ FRRPN N TSN YW AVSH+AP
Sbjct: 301 MVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAP 360
Query: 361 AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV 420
A +YD YLR+TGR PRM K + RL + + LEYF + SW W+T N MLM++L+PED++
Sbjct: 361 AFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKT 420
Query: 421 FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWR 480
FN DVRQL+W EYIENY LG KKY+L E+M+G+P A++ L +LRNI Y FNT L ++ WR
Sbjct: 421 FNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWR 480
Query: 481 LLIARSQMARNVWFFIVSFCYKFLSYFRASSTLK 514
+ IARSQMARN+W+F+VS CYKFLSYFRASST++
Sbjct: 481 IFIARSQMARNIWYFVVSLCYKFLSYFRASSTMR 514
>gi|239747878 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 148
Score = 140 bits (354), Expect = 2e-33
Identities = 74/112 (66%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 270 MAVADVIPV--DTVVNLMLAVGWYTAVHR--PKSTLVYHITSGNMNPCNWHKMGVQVLAT 325
MAV D+IP+ DT VNL LAVGW PKS LVYH TSGN+NPCN KMG QVLAT
Sbjct: 1 MAVGDLIPIPGDTAVNLPLAVGWCVCCSSQVPKSVLVYHCTSGNLNPCNRGKMGFQVLAT 60
Query: 326 FE-KIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPR 376
FE IPFER RP A+FT+++F +QYWNA+S +APAIIYD YL LTGRKPR
Sbjct: 61 FEIPIPFERALTRPYADFTTSNFRTQYWNAISQQAPAIIYDFYLWLTGRKPR 112
>gi|239747880 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 113
Score = 122 bits (307), Expect = 6e-28
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 288 VGWYTAV-HRPKSTLVYHITSGNMNPCNWHKMGVQVLATFE-KIPFERPFRRPNANFTSN 345
V WY +RPKS LVYH TSGN+NPCN KMG QVLATFE IPFER RP A+FT++
Sbjct: 5 VSWYKGKKNRPKSVLVYHCTSGNLNPCNRGKMGFQVLATFEIPIPFERALTRPYADFTTS 64
Query: 346 SFTSQYWNAVSHRAPAIIYDCYLRLTGRKP 375
+F +QYWNA+S +APAIIYD YL LTGRKP
Sbjct: 65 NFRTQYWNAISQQAPAIIYDFYLWLTGRKP 94
>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.056
Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 53/259 (20%)
Query: 10 GKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVK 69
G S L+TGA GFLG+ ++I +LV+ K + + ++LD +++
Sbjct: 3 GWSCLVTGAGGFLGQ-------------RIIRLLVKEK-----ELKEIRVLDKAFGPELR 44
Query: 70 EVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVR-FDDTLRHAV-QL 127
E + K + + + D K Q++ ++I H A + F T R ++ +
Sbjct: 45 EEFSKLQNKTKLTVLEGDILDEPFLKRACQDV----SVIIHTACIIDVFGVTHRESIMNV 100
Query: 128 NVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDA 187
NV T QLLL A + FI+ S+ + P K+II +
Sbjct: 101 NVKGT-QLLLEACVQASVPVFIYTSS------------IEVAGPNSYKEIIQN------- 140
Query: 188 IIDEITPKLIRDWPNIYTYTKALGEMVV-------QQESRNLNIAIIRPSIVGATWQEPF 240
L WP Y ++K L E V + L +RP +
Sbjct: 141 --GHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNGGTLYTCALRPMYIYGEGSRFL 198
Query: 241 PGWVDNINGPNGIIIATGK 259
++ NGI+ + GK
Sbjct: 199 SASINEALNNNGILSSVGK 217
>gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]
Length = 372
Score = 32.3 bits (72), Expect = 1.1
Identities = 57/259 (22%), Positives = 98/259 (37%), Gaps = 53/259 (20%)
Query: 10 GKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVK 69
G S L+TGA G LG+ +++ +LV K + + + LD +++
Sbjct: 2 GWSCLVTGAGGLLGQ-------------RIVRLLVEEK-----ELKEIRALDKAFRPELR 43
Query: 70 EVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVR-FDDTLRHAVQ-L 127
E + + + + + D K Q++ +++ H A + F T R ++ +
Sbjct: 44 EEFSKLQNRTKLTVLEGDILDEPFLKRACQDV----SVVIHTACIIDVFGVTHRESIMNV 99
Query: 128 NVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDA 187
NV T QLLL A + FI+ S+ + P K+II +
Sbjct: 100 NVKGT-QLLLEACVQASVPVFIYTSS------------IEVAGPNSYKEIIQNGH----- 141
Query: 188 IIDEITPKLIRDWPNIYTYTKALGEMVV-------QQESRNLNIAIIRPSIVGATWQEPF 240
E P L WP Y Y+K L E V + L +RP+ +
Sbjct: 142 ---EEEP-LENTWPTPYPYSKKLAEKAVLAANGWNLKNGDTLYTCALRPTYIYGEGGPFL 197
Query: 241 PGWVDNINGPNGIIIATGK 259
++ NGI+ + GK
Sbjct: 198 SASINEALNNNGILSSVGK 216
>gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]
Length = 350
Score = 31.2 bits (69), Expect = 2.4
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 26/169 (15%)
Query: 11 KSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVKE 70
K +L+TG GF+ ++ L P+ +I + K + + + +K
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINL---DKLDYCASLKNLETISNK------- 67
Query: 71 VCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQ---L 127
+ + I D+ + F + +++ +I+ H AA D + A + +
Sbjct: 68 ------QNYKFIQGDICDSHFVKLLFETEKI----DIVLHFAAQTHVDLSFVRAFEFTYV 117
Query: 128 NVTATRQLLLMASQMPKLEAFIHIST--AYSNCNLKHIDEVIYPCPVEP 174
NV T +L+ A+ ++E FI++ST Y K DE P P
Sbjct: 118 NVYGT-HVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNP 165
>gi|170650615 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 30.4 bits (67), Expect = 4.0
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 219 SRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLR---AIKATPMAVADV 275
S +L+ A P +V E GW+ ++ GPNG I G +R A+ A + +
Sbjct: 18 SYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSE 77
Query: 276 IPVDTVV 282
+ +D+ V
Sbjct: 78 LGLDSEV 84
>gi|4506001 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 30.4 bits (67), Expect = 4.0
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 219 SRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLR---AIKATPMAVADV 275
S +L+ A P +V E GW+ ++ GPNG I G +R A+ A + +
Sbjct: 18 SYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSE 77
Query: 276 IPVDTVV 282
+ +D+ V
Sbjct: 78 LGLDSEV 84
>gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 102 LSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLL---MASQMPKLEAFIHISTAYSNC 158
++C N +F C+A VR D+ + H R + +MPK E H NC
Sbjct: 81 IACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELPNH------NC 134
Query: 159 NLKHIDEVI 167
+KH+ V+
Sbjct: 135 -IKHLRSVV 142
>gi|37588859 ring finger protein 41 isoform 2 [Homo sapiens]
Length = 246
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 102 LSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLL---MASQMPKLEAFIHISTAYSNC 158
++C N +F C+A VR D+ + H R + +MPK E H NC
Sbjct: 10 IACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELPNH------NC 63
Query: 159 NLKHIDEVI 167
+KH+ V+
Sbjct: 64 -IKHLRSVV 71
>gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 102 LSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLL---MASQMPKLEAFIHISTAYSNC 158
++C N +F C+A VR D+ + H R + +MPK E H NC
Sbjct: 81 IACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELPNH------NC 134
Query: 159 NLKHIDEVI 167
+KH+ V+
Sbjct: 135 -IKHLRSVV 142
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 6.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 292 TAVHRPKSTLVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQY 351
+A+ RP ++I S + PC+ AT P RP RP + ++ Y
Sbjct: 366 SAICRPTCPRTFYIPSSSKRPCS---------ATISYRPVSRPICRPICSGLL-TYRQPY 415
Query: 352 WNAVSHRAPAIIYDCY 367
++S+R PA CY
Sbjct: 416 MTSISYR-PACYRPCY 430
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 6.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 292 TAVHRPKSTLVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQY 351
+A+ RP ++I S + PC+ AT P RP RP + ++ Y
Sbjct: 366 SAICRPTCPRTFYIPSSSKRPCS---------ATISYRPVSRPICRPICSGLL-TYRQPY 415
Query: 352 WNAVSHRAPAIIYDCY 367
++S+R PA CY
Sbjct: 416 MTSISYR-PACYRPCY 430
>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 6.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 292 TAVHRPKSTLVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQY 351
+A+ RP ++I S + PC+ AT P RP RP + ++ Y
Sbjct: 366 SAICRPTCPRTFYIPSSSKRPCS---------ATISYRPVSRPICRPICSGLL-TYRQPY 415
Query: 352 WNAVSHRAPAIIYDCY 367
++S+R PA CY
Sbjct: 416 MTSISYR-PACYRPCY 430
>gi|7706457 A-kinase anchor protein 11 [Homo sapiens]
Length = 1901
Score = 29.6 bits (65), Expect = 6.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 60 LDSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQE-LLSCTNIIFHCA 112
LD K K K + + + I+ ADL + F + +D+Q+ + SCTN ++H A
Sbjct: 533 LDQKNKSKNKSLM--IKDSIQKFAADLVEKSFGSAFKDLQKGVSSCTNALYHLA 584
>gi|42740907 clusterin isoform 2 [Homo sapiens]
Length = 449
Score = 29.3 bits (64), Expect = 9.0
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 22/72 (30%)
Query: 376 RMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIE 435
R+T+ N LL+ S++W NT L+ +L+ Q NW+ +
Sbjct: 336 RLTRKYNELLK-----------SYQWKMLNTSSLLEQLN-----------EQFNWVSRLA 373
Query: 436 NYVLGVKKYLLK 447
N G +Y L+
Sbjct: 374 NLTQGEDQYYLR 385
>gi|42716297 clusterin isoform 1 [Homo sapiens]
Length = 501
Score = 29.3 bits (64), Expect = 9.0
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 22/72 (30%)
Query: 376 RMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIE 435
R+T+ N LL+ S++W NT L+ +L+ Q NW+ +
Sbjct: 388 RLTRKYNELLK-----------SYQWKMLNTSSLLEQLN-----------EQFNWVSRLA 425
Query: 436 NYVLGVKKYLLK 447
N G +Y L+
Sbjct: 426 NLTQGEDQYYLR 437
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 29.3 bits (64), Expect = 9.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 50 QTLQQRVFQILDSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIF 109
+TL + SK+ ++ E+CPN+ + DL Q D + S D L C +
Sbjct: 207 KTLVLAYSSAVSSKMVRQILELCPNLE------HLDLTQTDISDSAFDSWSWLGCCQSLR 260
Query: 110 H 110
H
Sbjct: 261 H 261
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 29.3 bits (64), Expect = 9.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 50 QTLQQRVFQILDSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIF 109
+TL + SK+ ++ E+CPN+ + DL Q D + S D L C +
Sbjct: 333 KTLVLAYSSAVSSKMVRQILELCPNLE------HLDLTQTDISDSAFDSWSWLGCCQSLR 386
Query: 110 H 110
H
Sbjct: 387 H 387
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,758,748
Number of Sequences: 37866
Number of extensions: 736799
Number of successful extensions: 2162
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2151
Number of HSP's gapped (non-prelim): 24
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.