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Search of human proteins with 31542498
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542498 DCP2 decapping enzyme [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 879 0.0
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 40 0.005
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 39 0.009
gi|37221177 nudix-type motif 11 [Homo sapiens] 36 0.057
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 36 0.057
gi|41393549 nudix-type motif 10 [Homo sapiens] 35 0.098
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 33 0.48
gi|5729804 nudix-type motif 3 [Homo sapiens] 33 0.48
gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo sapi... 30 3.1
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 30 5.4
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 30 5.4
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 30 5.4
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 30 5.4
gi|10835073 N-myristoyltransferase 1 [Homo sapiens] 30 5.4
gi|37594464 nudix-type motif 5 [Homo sapiens] 29 7.0
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 29 9.1
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ... 29 9.1
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 29 9.1
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 879 bits (2270), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC 60
METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
Sbjct: 1 METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC 60
Query: 61 GIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA 120
GIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
Sbjct: 61 GIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA 120
Query: 121 KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGI 180
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGI
Sbjct: 121 KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGI 180
Query: 181 PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS 240
PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS
Sbjct: 181 PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS 240
Query: 241 RRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQKP 300
RRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQKP
Sbjct: 241 RRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQKP 300
Query: 301 YNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNGLQPAKQQNSLMKCEKKLHPRKL 360
YNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNGLQPAKQQNSLMKCEKKLHPRKL
Sbjct: 301 YNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNGLQPAKQQNSLMKCEKKLHPRKL 360
Query: 361 QDNFETDAVYDLPSSSEDQLLEHAEGQPVACNGHCKFPFSSRAFLSFKFDHNAIMKILDL 420
QDNFETDAVYDLPSSSEDQLLEHAEGQPVACNGHCKFPFSSRAFLSFKFDHNAIMKILDL
Sbjct: 361 QDNFETDAVYDLPSSSEDQLLEHAEGQPVACNGHCKFPFSSRAFLSFKFDHNAIMKILDL 420
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 0.005
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 87 LDEWKEYKMGVPTYGAIILDETLENVLLVQGY-LAKSGWGFPKGKVNKEEAPHDCAAREV 145
L + +++GV + DE+ +L+VQ K+ W FP G EE D A REV
Sbjct: 136 LPGYASHQVGV---AGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREV 192
Query: 146 FEETG 150
FEETG
Sbjct: 193 FEETG 197
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 38.9 bits (89), Expect = 0.009
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELR 166
E + VLLV W P G + EE P A REV+EE G +K + + I +
Sbjct: 29 EQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAG--VKGKLGRLLGIFEQ 86
Query: 167 INDQLARLYI----IPGIPKDTKFNPKTRREIRNIEWFSIEK----LPCHR---NDMTPK 215
D+ R Y+ + I +D + + R+ EWF +E L CH+ + K
Sbjct: 87 NQDRKHRTYVYVLTVTEILEDWEDSVNIGRK---REWFKVEDAIKVLQCHKPVHAEYLEK 143
Query: 216 SKLGLAPNKFFMAIP 230
KLG +P +P
Sbjct: 144 LKLGCSPANGNSTVP 158
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 36.2 bits (82), Expect = 0.057
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELR 166
E + VLLV W P G + EE P A REV+EE G +K + + + +
Sbjct: 28 EREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAG--VKGKLGRLLGVFEQ 85
Query: 167 INDQLARLYIIPGIPKDTKFNPKTRREI-RNIEWFSIEK----LPCHR---NDMTPKSKL 218
D+ R Y+ + + + I R EWF +E L CH+ + K KL
Sbjct: 86 NQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAEYLEKLKL 145
Query: 219 GLAP 222
G +P
Sbjct: 146 GGSP 149
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.057
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELR 166
E + VLLV W P G + EE P A REV+EE G +K + + I
Sbjct: 29 EQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAG--VKGKLGRLLGI-FE 85
Query: 167 INDQLARLYI----IPGIPKDTKFNPKTRREIRNIEWFSIEK----LPCHR---NDMTPK 215
D+ R Y+ + I +D + + R+ EWF +E L CH+ + K
Sbjct: 86 NQDRKHRTYVYVLTVTEILEDWEDSVNIGRK---REWFKVEDAIKVLQCHKPVHAEYLEK 142
Query: 216 SKLGLAPNKFFMAIP 230
KLG +P +P
Sbjct: 143 LKLGCSPANGNSTVP 157
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 35.4 bits (80), Expect = 0.098
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELR 166
E + VLLV W P G + EE P A REV+EE G +K + + + +
Sbjct: 28 EREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAG--VKGKLGRLLGVFEQ 85
Query: 167 INDQLARLYIIPGIPKDTKFNPKTRREI-RNIEWFSIEK----LPCHR---NDMTPKSKL 218
D R Y+ + + + I R EWF +E L CH+ + K KL
Sbjct: 86 NQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAEYLEKLKL 145
Query: 219 GLAP 222
G +P
Sbjct: 146 GGSP 149
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 33.1 bits (74), Expect = 0.48
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 124 WGFPKGKVNKEEAPHDCAAREVFEETG 150
W FP G EE D A REVFEETG
Sbjct: 2 WKFPGGLSEPEEDIGDTAVREVFEETG 28
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 33.1 bits (74), Expect = 0.48
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETG 150
E+ E VLLV W P G + EE P A REV EE G
Sbjct: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAG 72
>gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
sapiens]
Length = 213
Score = 30.4 bits (67), Expect = 3.1
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 293 RQPLQQKPYNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQK---------KRTNGLQPAK 343
R + ++ ++ + L GKN S+ G P + K +NG Q K
Sbjct: 19 RAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQGGWAGDSVKASNGTQTGK 78
Query: 344 QQNSLMKCEKKLHPRKL 360
QQ L C K H R L
Sbjct: 79 QQLDLNACYHKTHHRDL 95
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 29.6 bits (65), Expect = 5.4
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Query: 262 KPTVEKLSRTKFRHSQQLFPDGSPGDQ----WVKHRQPLQQKPYNNHSEMSDLLKGKNQS 317
K +EKL T+ + + PG + + + R + + + HS S G ++S
Sbjct: 154 KRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKS 213
Query: 318 MRGNGRKQYQDSPNQKKRTNGLQPAKQQNSLMKCEKKLHPRKLQDNFETDAVYDLPSSSE 377
R + + + ++ Q S K EK P K + + + S S+
Sbjct: 214 SHSKSRSRSRSGSRSRSKSRS---RSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSK 270
Query: 378 DQLLE 382
DQ E
Sbjct: 271 DQAEE 275
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 29.6 bits (65), Expect = 5.4
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 240 SRRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQK 299
SR+FG + S+NG T + + E L + Q+ F G+ G W + Q +
Sbjct: 369 SRKFGGNELSENGIKVTRESSSSDLAENLGFGLEKFGQKGF--GTSGSGW--NEQSSSKS 424
Query: 300 PYNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNG 338
+ E S L + +G ++DS + + NG
Sbjct: 425 DVSGAVEKSWLFEFGLGETKGGAEFNFRDSGSNQSGDNG 463
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 29.6 bits (65), Expect = 5.4
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 240 SRRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQK 299
SR+FG + S+NG T + + E L + Q+ F G+ G W + Q +
Sbjct: 380 SRKFGGNELSENGIKVTRESSSSDLAENLGFGLEKFGQKGF--GTSGSGW--NEQSSSKS 435
Query: 300 PYNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNG 338
+ E S L + +G ++DS + + NG
Sbjct: 436 DVSGAVEKSWLFEFGLGETKGGAEFNFRDSGSNQSGDNG 474
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 29.6 bits (65), Expect = 5.4
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 240 SRRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVKHRQPLQQK 299
SR+FG + S+NG T + + E L + Q+ F G+ G W + Q +
Sbjct: 380 SRKFGGNELSENGIKVTRESSSSDLAENLGFGLEKFGQKGF--GTSGSGW--NEQSSSKS 435
Query: 300 PYNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQKKRTNG 338
+ E S L + +G ++DS + + NG
Sbjct: 436 DVSGAVEKSWLFEFGLGETKGGAEFNFRDSGSNQSGDNG 474
>gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
Length = 496
Score = 29.6 bits (65), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 320 GNGRKQYQDSPNQKKRT---NGLQPAKQQNSLMKCEKKLHPRKLQDNFETDAVYDLP 373
GNG + D N++ + GL PA + K +KK +K + ETD+ D P
Sbjct: 24 GNGHEHCSDCENEEDNSYNRGGLSPANDTGA--KKKKKKQKKKKEKGSETDSAQDQP 78
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 104 ILDETL--ENVLLVQGYLAKSGW---GFPKGKVNKEEAPHDCAAREVFEETGF 151
+L TL E ++LV+ + G FP G ++ E P A RE+ EETG+
Sbjct: 67 VLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY 119
>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
Length = 1439
Score = 28.9 bits (63), Expect = 9.1
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
Query: 232 IRPLRDWLSRRFGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLFPDGSPGDQWVK 291
+R LR+ S FG++S + SS S P PT +S + ++ P G + +
Sbjct: 393 VRDLREKYSN-FGNNSYHSSRPSSGSSVPTTPT-SSVSPPQEARLERSSPSGLLTSSFRQ 450
Query: 292 HRQPLQQKPYNNHSEMSDLLKGKNQSMRGNGRKQYQDS-PNQKKRTNGLQPAKQQNSLMK 350
H++ L + E + L+ + R + Y D Q++ +Q + +
Sbjct: 451 HQESLAAERERRRQEREERLQRIEREERNKFSRDYLDKREEQRQAREERYKYLEQLAAEE 510
Query: 351 CEKKLHPRKLQDNFETDAVYDLPSSSEDQLLEHAEGQP 388
EK+L R + D DL S + L P
Sbjct: 511 HEKELRSRSVSRG-RADLSLDLTSPAAPACLAPLSHSP 547
>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
sapiens]
Length = 1376
Score = 28.9 bits (63), Expect = 9.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 81 EDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYL 119
E++ KV+ + + +G+ ++ LD ++ NV ++ GYL
Sbjct: 197 EEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYL 235
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 28.9 bits (63), Expect = 9.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 81 EDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYL 119
E++ KV+ + + +G+ ++ LD ++ NV ++ GYL
Sbjct: 197 EEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYL 235
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,871,954
Number of Sequences: 37866
Number of extensions: 868548
Number of successful extensions: 2063
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2053
Number of HSP's gapped (non-prelim): 19
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.