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Search of human proteins with 31542242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542242 serine/threonine-protein phosphatase 2A regulatory
subunit B'' gamma subunit [Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542242 serine/threonine-protein phosphatase 2A regulatory s... 918 0.0
gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha... 123 3e-28
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha... 123 3e-28
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 118 1e-26
gi|41349491 protein phosphatase 2, regulatory subunit B'', beta ... 45 2e-04
gi|6005731 calcium binding protein P22 [Homo sapiens] 41 0.002
gi|4826655 calbindin 1 [Homo sapiens] 40 0.006
gi|215983090 guanylate cyclase activator 1C [Homo sapiens] 40 0.006
gi|19913443 hippocalcin-like 1 [Homo sapiens] 36 0.063
gi|19913441 hippocalcin-like 1 [Homo sapiens] 36 0.063
gi|19913446 hippocalcin [Homo sapiens] 35 0.11
gi|98985795 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985793 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985791 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985789 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985787 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985785 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985783 neurocalcin delta [Homo sapiens] 35 0.14
gi|98985778 neurocalcin delta [Homo sapiens] 35 0.14
gi|192447423 frequenin homolog isoform 2 [Homo sapiens] 35 0.18
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 35 0.18
gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens] 33 0.53
gi|14161692 calpain small subunit 2 [Homo sapiens] 32 1.5
gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapi... 31 2.0
gi|148746195 trichohyalin [Homo sapiens] 30 3.4
gi|7705419 hippocalcin-like protein 4 [Homo sapiens] 30 3.4
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 30 5.9
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 30 5.9
gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapi... 30 5.9
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 29 7.7
>gi|31542242 serine/threonine-protein phosphatase 2A regulatory
subunit B'' gamma subunit [Homo sapiens]
Length = 453
Score = 918 bits (2373), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY 60
MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY
Sbjct: 1 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY 60
Query: 61 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY 120
YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY
Sbjct: 61 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY 120
Query: 121 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY 180
ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY
Sbjct: 121 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY 180
Query: 181 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI 240
DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI
Sbjct: 181 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI 240
Query: 241 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR 300
QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR
Sbjct: 241 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR 300
Query: 301 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY 360
YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY
Sbjct: 301 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY 360
Query: 361 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV 420
LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
Sbjct: 361 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV 420
Query: 421 TTILIDLNGFWTYENREALVANDSENSADLDDT 453
TTILIDLNGFWTYENREALVANDSENSADLDDT
Sbjct: 421 TTILIDLNGFWTYENREALVANDSENSADLDDT 453
>gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha
isoform 2 [Homo sapiens]
Length = 529
Score = 123 bits (309), Expect = 3e-28
Identities = 75/277 (27%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 188 LRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILA 245
L + D + +++ T P L L+ + F+S Y+ T +++ F+ ++ +GKI +I
Sbjct: 192 LEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRK 251
Query: 246 CSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTAT 305
+FL L L +EE +Q T++FS +Y ++ LD DH+ +S+ +LSRY
Sbjct: 252 SNFLQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQA 309
Query: 306 MTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
++ ++R+F +T +G M Y ++ F+++ E+++ P +++Y F+ +D++ G
Sbjct: 310 SSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDG 369
Query: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
L+++ L YF+ E M+ G +P+ F D+ ++ D+VKP KI+L+DL
Sbjct: 370 VLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHI 429
Query: 420 VTTILIDLNGFWTYENREAL-----VANDSENSADLD 451
+L + +E R+ V ND +D D
Sbjct: 430 FYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWD 466
>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
isoform 1 [Homo sapiens]
Length = 1150
Score = 123 bits (309), Expect = 3e-28
Identities = 75/277 (27%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 188 LRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILA 245
L + D + +++ T P L L+ + F+S Y+ T +++ F+ ++ +GKI +I
Sbjct: 813 LEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRK 872
Query: 246 CSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTAT 305
+FL L L +EE +Q T++FS +Y ++ LD DH+ +S+ +LSRY
Sbjct: 873 SNFLQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQA 930
Query: 306 MTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
++ ++R+F +T +G M Y ++ F+++ E+++ P +++Y F+ +D++ G
Sbjct: 931 SSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDG 990
Query: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
L+++ L YF+ E M+ G +P+ F D+ ++ D+VKP KI+L+DL
Sbjct: 991 VLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHI 1050
Query: 420 VTTILIDLNGFWTYENREAL-----VANDSENSADLD 451
+L + +E R+ V ND +D D
Sbjct: 1051 FYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWD 1087
>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
isoform 1 [Homo sapiens]
Length = 575
Score = 118 bits (295), Expect = 1e-26
Identities = 68/279 (24%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 184 GQGYLRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQ 241
G YL + D ++ +++ T P L L+++ F+S Y+ T +++ F+ ++ +G+I
Sbjct: 225 GCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCA 284
Query: 242 DILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRY 301
++ SFL ++ L +E + +Q T +FS +Y ++ LD DH+ ++ ++L+R+
Sbjct: 285 ELRRSSFLQNVALLEEE--ADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARH 342
Query: 302 GTATMTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDI 355
++ +DR+F +T +G++ Y ++ F+++ E++K P +++Y F+ +D+
Sbjct: 343 NDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDL 402
Query: 356 ENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSN 415
+ G L++F L YF+ + + + FQD ++ D+VKP+ KI+LQDL
Sbjct: 403 DGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCK 462
Query: 416 QGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDD 452
+ ++ + +E +E +L+ + +L D
Sbjct: 463 LANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSD 501
>gi|41349491 protein phosphatase 2, regulatory subunit B'', beta
isoform 2 [Homo sapiens]
Length = 176
Score = 44.7 bits (104), Expect = 2e-04
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 353 LDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLI 412
+D++ G L++F L YF+ + + + FQD ++ D+VKP+ KI+LQDL
Sbjct: 1 MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
Query: 413 NSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDD 452
+ ++ + +E +E +L+ + +L D
Sbjct: 61 RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSD 102
>gi|6005731 calcium binding protein P22 [Homo sapiens]
Length = 195
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 255 LRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR 300
LRDEEL + +ET FS R+Y ++ +LDK NG LS+E+ R
Sbjct: 9 LRDEELEEIKKETG-FSHSQITRLYSRFTSLDKGENGTLSREDFQR 53
>gi|4826655 calbindin 1 [Homo sapiens]
Length = 261
Score = 39.7 bits (91), Expect = 0.006
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 63/284 (22%)
Query: 155 ISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSF 214
I+ QFF ++WLH +D G GYL +L+N I EL + GLE S
Sbjct: 11 ITASQFF-----EIWLH--------FDADGSGYLEGKELQNLIQELQQARKKA-GLELS- 55
Query: 215 YSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDD--LLELRDEELSKESQETNWFSA 272
++ F GKI I ++ ++ LL R ++L S
Sbjct: 56 ------PEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLK---------SC 100
Query: 273 PSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDYKTYLD 332
++ + +Y D DH+G + EEL FL + ++ + Y D
Sbjct: 101 EEFMKTWRKY---DTDHSGFIETEELKN---------FLKDLLEKANKTVDDTKLAEYTD 148
Query: 333 FVLAL--ENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDV 390
+L L N L + +LL ++ L + + + +++ QD + D
Sbjct: 149 LMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYID- 207
Query: 391 KDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYE 434
++ L L+DL N+ D +D+N TY+
Sbjct: 208 ----------ENELDALLKDLCEKNKQD------LDINNITTYK 235
>gi|215983090 guanylate cyclase activator 1C [Homo sapiens]
Length = 209
Score = 39.7 bits (91), Expect = 0.006
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 295 KEELSRYGTATMTNVFLDRVFQECLTY-DGEMDYKTYLDFVLALENRKEPAALQYIFKLL 353
K L G N +D+V+ T DG +D+ ++ V + K L++ FKL
Sbjct: 41 KTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLY 100
Query: 354 DIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLIN 413
D + G ++ L F A+Q L +GQ +S ++ + +F + + +++L++ IN
Sbjct: 101 DADGNGSIDKNELLDMFMAVQAL---NGQQTLSPEEFINLVFHKIDINNDGELTLEEFIN 157
Query: 414 SNQGD 418
D
Sbjct: 158 GMAKD 162
>gi|19913443 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 36.2 bits (82), Expect = 0.063
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 301 YGTATMTNVFLDRVFQECLTY-DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
YG A+ F + VF+ T DG +D++ ++ + K L++ F + D++ G
Sbjct: 58 YGDASK---FAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNG 114
Query: 360 YLN----VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSN 415
Y++ + + ++ + +MK+ +D + + D+IF + + K+SL++ I
Sbjct: 115 YISRSEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIRGA 173
Query: 416 QGD 418
+ D
Sbjct: 174 KSD 176
>gi|19913441 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 36.2 bits (82), Expect = 0.063
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 301 YGTATMTNVFLDRVFQECLTY-DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
YG A+ F + VF+ T DG +D++ ++ + K L++ F + D++ G
Sbjct: 58 YGDASK---FAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNG 114
Query: 360 YLN----VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSN 415
Y++ + + ++ + +MK+ +D + + D+IF + + K+SL++ I
Sbjct: 115 YISRSEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIRGA 173
Query: 416 QGD 418
+ D
Sbjct: 174 KSD 176
>gi|19913446 hippocalcin [Homo sapiens]
Length = 193
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 254 ELRDEELSKESQETNWFSAPSALRVYGQYLNLDKD-HNGMLSKEELSR-------YGTAT 305
+LR E L + T + S L + Y KD G+L+ +E + YG A+
Sbjct: 7 KLRPEMLQDLRENTEF----SELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGDAS 62
Query: 306 MTNVFLDRVFQECLTY-DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLN-- 362
F + VF+ T DG +D++ ++ + + L + F + D++ GY++
Sbjct: 63 K---FAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISRE 119
Query: 363 --VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGD 418
+ + ++ + +MK+ +D + + ++IF + + K+SL++ I + D
Sbjct: 120 EMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSD 176
>gi|98985795 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985793 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985791 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985789 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985787 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985785 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985783 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|98985778 neurocalcin delta [Homo sapiens]
Length = 193
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G LS EE + YG A+ + R F DG +D++ ++ + K
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA--NGDGTIDFREFIIALSVTSRGKL 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSL----NYFFRAIQELMKIHGQDPVSFQDVKDEIFDMV 398
L++ F + D++ GY++ + ++ + +MK+ +D + + ++IF +
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM-PEDESTPEKRTEKIFRQM 156
Query: 399 KPKDPLKISLQDLINSNQGD 418
K+SL++ I + D
Sbjct: 157 DTNRDGKLSLEEFIRGAKSD 176
>gi|192447423 frequenin homolog isoform 2 [Homo sapiens]
Length = 172
Score = 34.7 bits (78), Expect = 0.18
Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 301 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY 360
+G T F+ VF E DG +++ ++ + L++ FKL D++N GY
Sbjct: 40 FGDPTKFATFVFNVFDE--NKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGY 97
Query: 361 LN----VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQ 416
+ + ++ ++ + +++ ++ + V D IF M+ K++LQ+ ++
Sbjct: 98 ITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRV-DRIFAMMDKNADGKLTLQEFQEGSK 156
Query: 417 GD 418
D
Sbjct: 157 AD 158
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 34.7 bits (78), Expect = 0.18
Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 301 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY 360
+G T F+ VF E DG +++ ++ + L++ FKL D++N GY
Sbjct: 58 FGDPTKFATFVFNVFDE--NKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGY 115
Query: 361 LN----VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQ 416
+ + ++ ++ + +++ ++ + V D IF M+ K++LQ+ ++
Sbjct: 116 ITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRV-DRIFAMMDKNADGKLTLQEFQEGSK 174
Query: 417 GD 418
D
Sbjct: 175 AD 176
>gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens]
Length = 201
Score = 33.1 bits (74), Expect = 0.53
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 322 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHG 381
DG +D+ Y+ + + K L++ FKL D++ G ++ L +AI+ +
Sbjct: 68 DGYIDFMEYVAALSLVLKGKVEQKLRWYFKLYDVDGNGCIDRDELLTIIQAIRAINPC-S 126
Query: 382 QDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGD 418
++ ++ D +F + ++SL++ I Q D
Sbjct: 127 DTTMTAEEFTDTVFSKIDVNGDGELSLEEFIEGVQKD 163
>gi|14161692 calpain small subunit 2 [Homo sapiens]
Length = 248
Score = 31.6 bits (70), Expect = 1.5
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 278 VYGQYLNLDKDHNGMLSKEELSRYGTAT---MTNVFLDRVFQECLTYDGEMDYKTYLDFV 334
VY QY D+DH+G L +L A + + + DG+MD+ ++ +
Sbjct: 157 VYKQY---DRDHSGSLGSSQLRGALQAAGFQLNEQLYQMIVRRYANEDGDMDFNNFISCL 213
Query: 335 LALENRKEPAALQYIFKLLDIENKGYLNV 363
+ L+ A+ FK LD + G + V
Sbjct: 214 VRLD------AMFRAFKSLDRDRDGLIQV 236
>gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo
sapiens]
Length = 544
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 268 NWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDY 327
+W L Y + K G + EE ++Y +++V +DG +D+
Sbjct: 356 DWDGVRKHLDEYASIASSSK--GGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDF 413
Query: 328 KTYLDFVLALENRKEPAAL-QYIFKLLDIENKGYL 361
+ Y+ + L N + Q FKL D++ GY+
Sbjct: 414 REYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYI 448
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 30.4 bits (67), Expect = 3.4
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 20 KKKSEQELKDEEMDLFT-----KYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKL 74
K + E+EL+ EE L + EW+ + +E L E+E LL++
Sbjct: 989 KYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDE-----------LQQEEEQLLREE 1037
Query: 75 REESRAVFLQRKSRELLDNEELQ 97
RE+ R LQ + R+ + EELQ
Sbjct: 1038 REKRR---LQERERQYREEEELQ 1057
>gi|7705419 hippocalcin-like protein 4 [Homo sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 3.4
Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 290 NGMLSKEELSR-------YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKE 342
+G+L+ EE + YG A+ R F + DG +D++ ++ +
Sbjct: 40 SGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDK--NGDGTIDFREFICALSVTSRGSF 97
Query: 343 PAALQYIFKLLDIENKGYLNVFSLNYFFRAIQE-----LMKIHGQDPVSFQDVKDEIFDM 397
L + F++ D++ G + + AI + +M QD ++ Q D+IF
Sbjct: 98 EQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKK 157
Query: 398 VKPKDPLKISLQDLINSNQGDTVTTILI 425
+ +I+L++ + + D +L+
Sbjct: 158 MDQDKDDQITLEEFKEAAKSDPSIVLLL 185
>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 2 [Homo sapiens]
Length = 2472
Score = 29.6 bits (65), Expect = 5.9
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 23 SEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLP--------AEDEVLLQKL 74
+E+ LK E + K++ + K GR N EF + Y LP E E +L +
Sbjct: 2321 TEEALK--EFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTV 2378
Query: 75 ---------REESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMIN 119
+E A + R++ + +EE+++ + L P + EE N
Sbjct: 2379 DPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQN 2432
>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 1 [Homo sapiens]
Length = 2477
Score = 29.6 bits (65), Expect = 5.9
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 23 SEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLP--------AEDEVLLQKL 74
+E+ LK E + K++ + K GR N EF + Y LP E E +L +
Sbjct: 2326 TEEALK--EFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTV 2383
Query: 75 ---------REESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMIN 119
+E A + R++ + +EE+++ + L P + EE N
Sbjct: 2384 DPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQN 2437
>gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo
sapiens]
Length = 1227
Score = 29.6 bits (65), Expect = 5.9
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 317 ECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQEL 376
+ +T DG++DY+T F ++ RK A+ ++ K +E + YL +F++ QEL
Sbjct: 489 KAVTEDGKVDYRTEQKFADHMK-RKSEASSEFAKKKSILEQRQYLPIFAVQ------QEL 541
Query: 377 MKI 379
+ I
Sbjct: 542 LTI 544
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 29.3 bits (64), Expect = 7.7
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 17 CPNK-KKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY--YRLPAEDEVLLQK 73
C K K +E+ELKD+ + KY + +KN E K + + + VL++K
Sbjct: 981 CERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEK 1040
Query: 74 LREESRAVFLQRKSRELLDNEELQNL 99
E RA L RK+ EL N++L++L
Sbjct: 1041 SHEMERA--LSRKTDEL--NKQLKDL 1062
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,704,948
Number of Sequences: 37866
Number of extensions: 727582
Number of successful extensions: 2121
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 52
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.