Search of human proteins with 30039714

Search of human proteins with 30039714

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30039714 otopetrin 2 [Homo sapiens]
         (562 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30039714 otopetrin 2 [Homo sapiens]                               1144   0.0  
gi|30102940 otopetrin 3 [Homo sapiens]                                429   e-120
gi|29725635 otopetrin 1 [Homo sapiens]                                328   8e-90
gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo sap...    31   3.5  
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           31   3.5  
gi|33286428 solute carrier family 7 (cationic amino acid transpo...    31   3.5  
gi|27886667 potassium voltage-gated channel, subfamily H, member...    30   5.9  
gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens]    30   5.9  
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is...    30   5.9  
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso...    30   5.9  
gi|118600969 C-type lectin domain family 17, member A [Homo sapi...    30   7.7  
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5...    30   7.7  
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   7.7  
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   7.7  
gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]    30   7.7  
gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]     30   7.7  

>gi|30039714 otopetrin 2 [Homo sapiens]
          Length = 562

 Score = 1144 bits (2960), Expect = 0.0
 Identities = 562/562 (100%), Positives = 562/562 (100%)

Query: 1   MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDT 60
           MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDT
Sbjct: 1   MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDT 60

Query: 61  DVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVF 120
           DVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVF
Sbjct: 61  DVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVF 120

Query: 121 KTGYYSSFFECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTN 180
           KTGYYSSFFECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTN
Sbjct: 121 KTGYYSSFFECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTN 180

Query: 181 LAIWMAAVVDESVHQSHSYSSSHSNASHARLISDQHADNPVGGDSCLCSTAVCQIFQQGY 240
           LAIWMAAVVDESVHQSHSYSSSHSNASHARLISDQHADNPVGGDSCLCSTAVCQIFQQGY
Sbjct: 181 LAIWMAAVVDESVHQSHSYSSSHSNASHARLISDQHADNPVGGDSCLCSTAVCQIFQQGY 240

Query: 241 FYLYPFNIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLF 300
           FYLYPFNIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLF
Sbjct: 241 FYLYPFNIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLF 300

Query: 301 VVGLAVFIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHH 360
           VVGLAVFIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHH
Sbjct: 301 VVGLAVFIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHH 360

Query: 361 KNPTRTLDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMF 420
           KNPTRTLDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMF
Sbjct: 361 KNPTRTLDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMF 420

Query: 421 IIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAI 480
           IIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAI
Sbjct: 421 IIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAI 480

Query: 481 VSTPRSQWRRQCLKDISLFLLLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNIC 540
           VSTPRSQWRRQCLKDISLFLLLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNIC
Sbjct: 481 VSTPRSQWRRQCLKDISLFLLLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNIC 540

Query: 541 LPFGIFYRMHAVSSLLEVYVLS 562
           LPFGIFYRMHAVSSLLEVYVLS
Sbjct: 541 LPFGIFYRMHAVSSLLEVYVLS 562


>gi|30102940 otopetrin 3 [Homo sapiens]
          Length = 596

 Score =  429 bits (1103), Expect = e-120
 Identities = 231/540 (42%), Positives = 326/540 (60%), Gaps = 33/540 (6%)

Query: 25  KKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAMMLLATLWILFYLLRT 84
           +K G+L S LLA+NV+ L    I    FNKVAV   DV+ LL  + +L+ LW+L+Y+  T
Sbjct: 84  QKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATLKVLSLLWLLYYVAST 143

Query: 85  VRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFFECQSAIKILHPLIQA 144
            R P AV Y+D HAGP+W+RG LVLFG CT  +++F+ GY  S   C+S + ++  +I+ 
Sbjct: 144 TRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFRVGYDVSHIRCKSQLDLVFSVIEM 203

Query: 145 VFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTNLAIWMAAVVDESVHQSHSYSSSHS 204
           VF+ +QT+ LW   KDCV V  + T CGLM TL TNL +W+ AV ++S+H+         
Sbjct: 204 VFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNLLLWVLAVTNDSMHREIE------ 257

Query: 205 NASHARLISDQHADNPVGGDSCLCSTA-VCQIFQQGYFYLYPFNIEYSLFASTMLYVMWK 263
             +   ++ ++   N    ++CLC  A  C+ F++G+  LYPF+ EY L    +L+VMWK
Sbjct: 258 --AELGILMEKSTGNET--NTCLCLNATACEAFRRGFLMLYPFSTEYCLICCAVLFVMWK 313

Query: 264 NVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLFVVGLAVFIIYEVQVSGDGSRTRQ 323
           NVGR +A   G      P  L    F  GP+LGLL+ + G+ VF++++++ SG      Q
Sbjct: 314 NVGRHVAPHMGAHPATAPFHLHGAIF--GPLLGLLVLLAGVCVFVLFQIEASGPAIAC-Q 370

Query: 324 ALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHHKNPTRTLDVALLMGAALGQYAIS 383
              +YY+F +  L   +L  L+G+ I+  + R +D  KNPTR+LDV LLMGAALGQ  I+
Sbjct: 371 YFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLMGAALGQMGIA 430

Query: 384 YYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMFIIESLHRGPP-GAEPHSTHPKEP 442
           Y+SIVA+VA  P +LL  L L ++LL+I QH  QN+FIIE LHR P     P     K+ 
Sbjct: 431 YFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQE 490

Query: 443 CQDLTFTNLDALHTLSACPPNPG-LVSPSPSDQREAVAIV-STPRSQWRRQCLKDISLFL 500
            +                PP  G L+      QR ++A + S     W+R+ LK+ISLFL
Sbjct: 491 AE----------------PPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFL 534

Query: 501 LLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVYV 560
           +LCN+ LW+MPAFG  P F N +E DFYGY +W  IVN  LP G+FYRMH+V  L+EVY+
Sbjct: 535 ILCNITLWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYL 594


>gi|29725635 otopetrin 1 [Homo sapiens]
          Length = 612

 Score =  328 bits (841), Expect = 8e-90
 Identities = 196/585 (33%), Positives = 297/585 (50%), Gaps = 51/585 (8%)

Query: 11  ESPPAPRAGPR-EVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAM 69
           ESP   R G R  V +K   +LS    + V +    L+   A +   V  +D+   LTA+
Sbjct: 40  ESPAPRRGGVRASVPQKLAEMLSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTAL 99

Query: 70  MLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFF 129
           MLL  LW+L+Y+ R+         +D HAG  WLRG + LF + T+I+   K GY+  F 
Sbjct: 100 MLLQLLWMLWYVGRSSAHRRLFRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFS 159

Query: 130 ECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTNLAIWMAAVV 189
           EC SA + + P+  +V  ++Q YFLW  AKD +     L   G++ ++ TNL +W   V+
Sbjct: 160 ECLSATEGVFPVTHSVHTLLQVYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVL 219

Query: 190 DESVHQSHSYSSSHSNASHARL--ISDQHADNPVGGDSCLCS-TAVCQIFQQGYFYLYPF 246
           +ES HQ + +           +  + D H         C C+   +C     G +YLYPF
Sbjct: 220 NESKHQLNEHKERLITLGFGNITTVLDDHT------PQCNCTPPTLCTAISHGIYYLYPF 273

Query: 247 NIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLFVVGLAV 306
           NIEY + ASTMLYV+WKN+GR +      SH    +    +    G VLGL +    +AV
Sbjct: 274 NIEYQILASTMLYVLWKNIGRKV-----DSHQHQKMQFKSDGVMVGAVLGLTVLAATIAV 328

Query: 307 FIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHHKNPTRT 366
            ++Y + +    +++  AL+++Y + I  L L     L+G  IYR D +++D  KNP R 
Sbjct: 329 VVVYLIHIGRSKTKSESALIMFYLYAITLLMLMGAAGLAGIRIYRIDEKSLDESKNPARK 388

Query: 367 LDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMFIIESLH 426
           LD  LL+G A G + IS+ SI+A++           NL +++L I +   QN+FI ES+H
Sbjct: 389 LDSDLLVGTASGSWLISWGSILAILCAEGHPRYTWYNLPYSILAIVEKYIQNLFIFESIH 448

Query: 427 RGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGL---VSPSPSDQREAV----- 478
           R P       +   +  + +T  N + +   S+CP + G+   V+P   D   A      
Sbjct: 449 REP----EKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKDMPPAANGNVC 504

Query: 479 ---------------------AIVSTPR---SQWRRQCLKDISLFLLLCNVILWIMPAFG 514
                                + V  PR      +R+ L++I+ FL LCN+ LWI PAFG
Sbjct: 505 MRESHDKEEEKQEESSWGGSPSPVRLPRFLQGNAKRKVLRNIAAFLFLCNISLWIPPAFG 564

Query: 515 ARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVY 559
            RP + N +E   +G+  W ++VN+ +PF IFYRMHA +SL EVY
Sbjct: 565 CRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYRMHAAASLFEVY 609


>gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo
           sapiens]
          Length = 570

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 433 EPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAV 478
           EP ST  ++P ++     +D     ++CPP P L SP   D  E V
Sbjct: 29  EPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSPPVPDIAETV 74


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 428 GPPG-AEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAIVSTP 484
           GPPG A P +  P  P +      L  LH   A PP P   +P+P   R      S P
Sbjct: 722 GPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGP 779


>gi|33286428 solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 8 isoform a [Homo
           sapiens]
          Length = 535

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 286 RETFFAGPVLGLLLFVVGLAVFIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLS 345
           ++ F AG +L L L +      I+  VQ+        +    + +F    +GL  L  L 
Sbjct: 187 QDIFTAGKLLALALII------IMGIVQICKGEYFWLEPKNAFENFQEPDIGLVALAFLQ 240

Query: 346 GSIIY---RFDRRAMDHHKNPTRTLDVALLMGAALGQYAISYYSIVAVVAGTPQDLLA 400
           GS  Y    F     +   +P + L  A+ +   L  +   + ++  V A +PQ+LLA
Sbjct: 241 GSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLA 298


>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
           [Homo sapiens]
          Length = 1107

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 30/154 (19%)

Query: 282 VSLFRETFFAGPVLGLLLFVVGLAVFIIYEVQVSG--DGSRTRQALV------IYYSFNI 333
           + L   TF AG    +LL    +AV + Y V   G  D S TR   V      I +  +I
Sbjct: 213 ILLHFSTFKAGWDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEILFIIDI 272

Query: 334 VCLGLTTLVSLSGSIIYRFDRRAMDHHKNPTRTLDVALLMGAALGQYAISYYSIVAVVAG 393
           +    TT VS SG +I  F+ R++  H                   Y  +++ I+ ++A 
Sbjct: 273 ILNFRTTYVSKSGQVI--FEARSICIH-------------------YVTTWF-IIDLIAA 310

Query: 394 TPQDLLAGLNLTHALLMIAQHTFQNMFIIESLHR 427
            P DLL   N+T   L+    T + + ++  L +
Sbjct: 311 LPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLLQK 344


>gi|5729929 matrix metalloproteinase 24 preproprotein [Homo
          sapiens]
          Length = 645

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 6  AQGPKESPPAPRAGPR-EVWKKGGRLLSVLLAVNVLL---LACTLISGGAFNKVAV 57
          A GP   PP P   PR   W+  GRLL +LL     L         + GA N+ AV
Sbjct: 10 APGPPPPPPPPGQAPRWSRWRVPGRLLLLLLPALCCLPGAARAAAAAAGAGNRAAV 65


>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
           isoform alpha [Homo sapiens]
          Length = 903

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 18/50 (36%), Positives = 21/50 (42%)

Query: 424 SLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSD 473
           SL  GP     HS  P EP  DLT +   A   L A  P+     P P +
Sbjct: 638 SLLLGPSFQSQHSFQPLEPKPDLTSSTAGAFSALGAFHPDHRAERPFPEE 687


>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
           isoform beta [Homo sapiens]
          Length = 925

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 18/50 (36%), Positives = 21/50 (42%)

Query: 424 SLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSD 473
           SL  GP     HS  P EP  DLT +   A   L A  P+     P P +
Sbjct: 638 SLLLGPSFQSQHSFQPLEPKPDLTSSTAGAFSALGAFHPDHRAERPFPEE 687


>gi|118600969 C-type lectin domain family 17, member A [Homo
           sapiens]
          Length = 289

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 429 PPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAIVSTP---- 484
           PP A   +  P  PC+    T LD       CPP    V+  PS  + ++A    P    
Sbjct: 83  PPRAAKETEKPPLPCKPRNMTGLDL--AAVTCPPPQLAVNLEPSPLQPSLAATPVPWLNQ 140

Query: 485 RSQWRRQCLKDISLFLLLCNVILWIMPAFG 514
           RS     C K   ++L L  V    +   G
Sbjct: 141 RSGGPGCCQKRWMVYLCLLVVTSLFLGCLG 170


>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
           [Homo sapiens]
          Length = 1218

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 428 GPPGAEPHSTHPKEPCQDLTFTNLDALHTLS 458
           GPPGA PHS  P++P         D++  +S
Sbjct: 13  GPPGASPHSAKPEKPGPGSKDPKADSVRAIS 43


>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 429  PPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPS 470
            PPG  PH   P  P   L        H +++ PP P    PS
Sbjct: 1683 PPGPAPHHHPPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPS 1724


>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 429  PPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPS 470
            PPG  PH   P  P   L        H +++ PP P    PS
Sbjct: 1683 PPGPAPHHHPPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPS 1724


>gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]
          Length = 878

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 412 AQHTFQNMFIIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSP 471
           A HT Q+  +  S    P  + P +T      Q L+F+  D     S  P NP   SP P
Sbjct: 698 ALHTLQSRLVATS----PGSSLPGATSASSLLQGLSFSLQDISSKTSGLPANP---SPGP 750

Query: 472 SDQREAVAIVSTPRS 486
           + Q  +V + +  +S
Sbjct: 751 APQATSVKLPTPMQS 765


>gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]
          Length = 791

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 412 AQHTFQNMFIIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSP 471
           A HT Q+  +  S    P  + P +T      Q L+F+  D     S  P NP   SP P
Sbjct: 611 ALHTLQSRLVATS----PGSSLPGATSASSLLQGLSFSLQDISSKTSGLPANP---SPGP 663

Query: 472 SDQREAVAIVSTPRS 486
           + Q  +V + +  +S
Sbjct: 664 APQATSVKLPTPMQS 678


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,998,926
Number of Sequences: 37866
Number of extensions: 1046313
Number of successful extensions: 3969
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3943
Number of HSP's gapped (non-prelim): 24
length of query: 562
length of database: 18,247,518
effective HSP length: 107
effective length of query: 455
effective length of database: 14,195,856
effective search space: 6459114480
effective search space used: 6459114480
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.