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Search of human proteins with 122937349
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens] 594 e-170
gi|122937474 glutaredoxin, cysteine rich 2 [Homo sapiens] 127 9e-30
gi|7705708 hypothetical protein LOC51066 [Homo sapiens] 41 0.001
gi|37537704 glutaredoxin 2 isoform 2 [Homo sapiens] 41 0.001
gi|21361507 glutaredoxin 2 isoform 1 [Homo sapiens] 41 0.001
gi|42516576 glutaredoxin 5 [Homo sapiens] 38 0.012
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 36 0.035
gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens] 32 0.50
gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens] 32 0.50
gi|4504777 integrin, beta 7 [Homo sapiens] 32 0.50
gi|62865621 toll-like receptor 10 precursor [Homo sapiens] 31 1.1
gi|62865618 toll-like receptor 10 precursor [Homo sapiens] 31 1.1
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 31 1.5
gi|215422388 death-domain associated protein isoform a [Homo sap... 31 1.5
gi|215422366 death-domain associated protein isoform b [Homo sap... 31 1.5
gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens] 31 1.5
gi|115298661 SCL/TAL1 interrupting locus isoform 2 [Homo sapiens] 31 1.5
gi|95113651 glutaredoxin 3 [Homo sapiens] 31 1.5
gi|4885419 zinc finger and BTB domain containing 48 [Homo sapiens] 30 2.5
gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens] 30 3.2
gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens] 30 3.2
gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens] 30 3.2
gi|31088936 zinc finger protein 70 [Homo sapiens] 30 3.2
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 29 4.2
gi|170784831 chromosome 1 open reading frame 9 protein isoform 2... 29 4.2
gi|7656940 chromosome 1 open reading frame 9 protein isoform 1 [... 29 4.2
gi|55741874 zinc finger protein 484 isoform b [Homo sapiens] 29 4.2
gi|55741876 zinc finger protein 484 isoform a [Homo sapiens] 29 4.2
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 29 5.5
gi|50959205 adenylate cyclase 9 [Homo sapiens] 28 7.2
>gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]
Length = 290
Score = 594 bits (1531), Expect = e-170
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQPSGSLDSECASICGIDGLGDSDG 60
MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQPSGSLDSECASICGIDGLGDSDG
Sbjct: 1 MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQPSGSLDSECASICGIDGLGDSDG 60
Query: 61 QQNGHIESEGDENENDQDSLLVLARAASEKGFGTRRVNILSKNGTVRGVKYKVSAGQALF 120
QQNGHIESEGDENENDQDSLLVLARAASEKGFGTRRVNILSKNGTVRGVKYKVSAGQALF
Sbjct: 61 QQNGHIESEGDENENDQDSLLVLARAASEKGFGTRRVNILSKNGTVRGVKYKVSAGQALF 120
Query: 121 NNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGE 180
NNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGE
Sbjct: 121 NNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGE 180
Query: 181 YGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECP 240
YGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECP
Sbjct: 181 YGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECP 240
Query: 241 SCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALKCTACNENGLQRCKNCAG 290
SCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALKCTACNENGLQRCKNCAG
Sbjct: 241 SCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALKCTACNENGLQRCKNCAG 290
>gi|122937474 glutaredoxin, cysteine rich 2 [Homo sapiens]
Length = 248
Score = 127 bits (320), Expect = 9e-30
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 48/288 (16%)
Query: 3 KREMKPESD-RPRKVRFRIASSHSGRVLKEVYEDGQPSGSLDSECASICGIDGLGDSDGQ 61
++++ +SD +PRKVRF+I+SS+SGRVLK+V+EDGQ S E + L DG
Sbjct: 5 EKKLNQKSDGKPRKVRFKISSSYSGRVLKQVFEDGQELESPKEEYPHSFLQESLETMDG- 63
Query: 62 QNGHIESEGDENENDQDSLLVLARAASEKGFGTRRVNILSKNGTVRGVKYKVSAGQALFN 121
+ G+ S + A+ R+++ + G Y ++ GQ FN
Sbjct: 64 ----VYGSGEVPRPQMCSPKLTAQ----------RISVFRE-----GNAYTLAGGQPRFN 104
Query: 122 NLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEY 181
+ +P ++F +++IYT L+++RT ++ + VRKI Q EE + Y
Sbjct: 105 DYKANDHKPLPIIDFGKIIIYTNNLKIIRTPMDKRDFVRKILQKEEEAEEESLMNKEESY 164
Query: 182 GKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHE-CP 240
G D+ R + EA E L N + DI P + C
Sbjct: 165 GGR-DQHDRPLVEA----------------ESTLPQNRYTQEGDI---------PEDSCF 198
Query: 241 SCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALKCTACNENGLQRCKNC 288
C G G CS+CHGSK SM N F +S++AL+C ACNENGLQ C+ C
Sbjct: 199 HCRGSGSATCSLCHGSKFSMLANRFKESYRALRCPACNENGLQPCQIC 246
>gi|7705708 hypothetical protein LOC51066 [Homo sapiens]
Length = 353
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 203 IDGHYLGGAEKILSMNESGELQDILTKIERVQHPH-----ECPSCGGFGFLPCSVCHGSK 257
+DG G + ++ + G + Q PH EC C G G CS CHG+
Sbjct: 115 VDGPQRGASPRLWDIKVQGPPM-FQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAG 173
Query: 258 MSMFRNCFTDSFKA---LKCTACNENGLQRCKNCAG 290
+C KA +C C +G +RC C+G
Sbjct: 174 TVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSG 209
>gi|37537704 glutaredoxin 2 isoform 2 [Homo sapiens]
Length = 164
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 114 SAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEK 173
+ +L N T + Q + + VVI++ +T+ C + +K+F + V ++
Sbjct: 44 NTSSSLENLATAPVNQIQETISDNCVVIFS------KTSCSYCTMAKKLFHDMNVNYKVV 97
Query: 174 NIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGEL 223
+ L EYG + + +++ ++P +F++G ++GGA +++ G+L
Sbjct: 98 ELDLL-EYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKL 146
>gi|21361507 glutaredoxin 2 isoform 1 [Homo sapiens]
Length = 165
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 114 SAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEK 173
+ +L N T + Q + + VVI++ +T+ C + +K+F + V ++
Sbjct: 45 NTSSSLENLATAPVNQIQETISDNCVVIFS------KTSCSYCTMAKKLFHDMNVNYKVV 98
Query: 174 NIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGEL 223
+ L EYG + + +++ ++P +F++G ++GGA +++ G+L
Sbjct: 99 ELDLL-EYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKL 147
>gi|42516576 glutaredoxin 5 [Homo sapiens]
Length = 157
Score = 37.7 bits (86), Expect = 0.012
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 184 ELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKI 230
EL + + S P++P V+++G ++GG + +L M+++G+L + L K+
Sbjct: 95 ELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKL 141
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 36.2 bits (82), Expect = 0.035
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 150 RTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLG 209
R+T RC V+K+F++ V + + E G+ L+ ++ LPVVF+ +G
Sbjct: 73 RSTCTRCTEVKKLFKSLCVPYFVLELDQT-EDGRALEGTLSELAAETDLPVVFVKQRKIG 131
Query: 210 GAEKILSMNESGELQDILTKIERVQHPHECP 240
G L + G LQ +L ++ P + P
Sbjct: 132 GHGPTLKAYQEGRLQKLL----KMNGPEDLP 158
>gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 32.3 bits (72), Expect = 0.50
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 184 ELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQ 234
E+ + ++++ A ++P VFI +GG ++S+ +SGEL L +I +Q
Sbjct: 56 EIQDYLQQLTGARTVPRVFIGKDCIGGCSDLVSLQQSGELLTRLKQIGALQ 106
>gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 32.3 bits (72), Expect = 0.50
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 184 ELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQ 234
E+ + ++++ A ++P VFI +GG ++S+ +SGEL L +I +Q
Sbjct: 56 EIQDYLQQLTGARTVPRVFIGKDCIGGCSDLVSLQQSGELLTRLKQIGALQ 106
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 32.3 bits (72), Expect = 0.50
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 237 HECPSCGGFGFLPCSVCHGSKMSMFRNC----FTDSFKALKCTACNENGLQRCKNC 288
HE CGGFG C VCH R C DS + + C+ +G +C C
Sbjct: 569 HEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRC 624
>gi|62865621 toll-like receptor 10 precursor [Homo sapiens]
Length = 811
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 134 LEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVS 193
++ D++ + T + + T ++ +F N+ KF+ N A N DE +R
Sbjct: 314 IQQDKIYLLLTKMDIENLTISNAQMPHMLFPNYPTKFQYLNFANN----ILTDELFKRTI 369
Query: 194 EAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHE 238
+ P L + ++G+ L + + L+ + +QH ++
Sbjct: 370 QLPHLKTLILNGNKLETLSLVSCFANNTPLEHLDLSQNLLQHKND 414
>gi|62865618 toll-like receptor 10 precursor [Homo sapiens]
Length = 811
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 134 LEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVS 193
++ D++ + T + + T ++ +F N+ KF+ N A N DE +R
Sbjct: 314 IQQDKIYLLLTKMDIENLTISNAQMPHMLFPNYPTKFQYLNFANN----ILTDELFKRTI 369
Query: 194 EAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHE 238
+ P L + ++G+ L + + L+ + +QH ++
Sbjct: 370 QLPHLKTLILNGNKLETLSLVSCFANNTPLEHLDLSQNLLQHKND 414
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 1 MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQ-PSGSLDSECASICGIDGLGDSD 59
ML+ + + + R+ R + SSHS + + G+ PSG C S + D D
Sbjct: 381 MLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAE-TDDED 439
Query: 60 GQQNGHIESEGDENENDQ 77
+++ E E +E E ++
Sbjct: 440 DEESDEEEEEEEEEEEEE 457
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 1 MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQ-PSGSLDSECASICGIDGLGDSD 59
ML+ + + + R+ R + SSHS + + G+ PSG C S + D D
Sbjct: 381 MLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAE-TDDED 439
Query: 60 GQQNGHIESEGDENENDQ 77
+++ E E +E E ++
Sbjct: 440 DEESDEEEEEEEEEEEEE 457
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 1 MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQ-PSGSLDSECASICGIDGLGDSD 59
ML+ + + + R+ R + SSHS + + G+ PSG C S + D D
Sbjct: 393 MLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAE-TDDED 451
Query: 60 GQQNGHIESEGDENENDQ 77
+++ E E +E E ++
Sbjct: 452 DEESDEEEEEEEEEEEEE 469
>gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens]
Length = 1288
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 12/142 (8%)
Query: 107 RGVKYKVSAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRV-VRTTFERCELVRKIFQN 165
+GV VS G +LF N Q+P + ++ D I + + V E L
Sbjct: 786 KGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPGSASSL 845
Query: 166 HRV---KFEEKNIALNGEYGKEL---DERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNE 219
V FEE NIA+ E+ + L + V + P +PV F G L
Sbjct: 846 KAVDIPSFEESNIAVEEEFNQPLSVSNSSSLVVRKEPDVPVFFPSGQLAESVSMCLQTGP 905
Query: 220 SGELQDIL-----TKIERVQHP 236
+G + KIE V P
Sbjct: 906 TGGASNNSETSEEPKIEHVMQP 927
>gi|115298661 SCL/TAL1 interrupting locus isoform 2 [Homo sapiens]
Length = 1287
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/141 (26%), Positives = 52/141 (36%), Gaps = 11/141 (7%)
Query: 107 RGVKYKVSAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRV-VRTTFERCELVRKIFQN 165
+GV VS G +LF N Q+P + ++ D I + + V E L
Sbjct: 786 KGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPGSASSL 845
Query: 166 HRV---KFEEKNIALNGEYGKEL--DERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNES 220
V FEE NIA+ E+ + L V + P +PV F G L +
Sbjct: 846 KAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCLQTGPT 905
Query: 221 GELQDIL-----TKIERVQHP 236
G + KIE V P
Sbjct: 906 GGASNNSETSEEPKIEHVMQP 926
>gi|95113651 glutaredoxin 3 [Homo sapiens]
Length = 335
Score = 30.8 bits (68), Expect = 1.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 183 KELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDIL 227
+E+ + + S P+ P +++ G +GG + + + E+GEL IL
Sbjct: 287 EEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPIL 331
>gi|4885419 zinc finger and BTB domain containing 48 [Homo sapiens]
Length = 688
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 28/95 (29%)
Query: 194 EAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVC 253
E P+ F+ +YL K+ + +GE P ECP CG C
Sbjct: 292 ECPTCHKKFLSKYYL----KVHNRKHTGE------------KPFECPKCGK--------C 327
Query: 254 HGSKMSMF----RNCFTDSFKALKCTACNENGLQR 284
+ K ++ RNC S + C+ C E +R
Sbjct: 328 YFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR 362
>gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens]
Length = 365
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 3 KREMKPESDRPRKVRF-------RIASSH-SGRVLKEVYEDGQPSGSLDSECASICGIDG 54
K + K RPRK F R SSH + + Y D P S S+ CG
Sbjct: 157 KSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCH 216
Query: 55 LGDSDGQQNGHI 66
+G+ + + G +
Sbjct: 217 VGEEENEARGKL 228
>gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens]
Length = 365
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 3 KREMKPESDRPRKVRF-------RIASSH-SGRVLKEVYEDGQPSGSLDSECASICGIDG 54
K + K RPRK F R SSH + + Y D P S S+ CG
Sbjct: 157 KSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCH 216
Query: 55 LGDSDGQQNGHI 66
+G+ + + G +
Sbjct: 217 VGEEENEARGKL 228
>gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens]
Length = 312
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 3 KREMKPESDRPRKVRF-------RIASSH-SGRVLKEVYEDGQPSGSLDSECASICGIDG 54
K + K RPRK F R SSH + + Y D P S S+ CG
Sbjct: 158 KSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCH 217
Query: 55 LGDSDGQQNGHI 66
+G+ + + G +
Sbjct: 218 VGEEENEARGKL 229
>gi|31088936 zinc finger protein 70 [Homo sapiens]
Length = 446
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 216 SMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALKCT 275
S N+S L KI ++ PHEC CG + CH S + + T K KC
Sbjct: 260 SFNQSSGLSQH-RKIHTLKKPHECDLCGK------AFCHRSHLIRHQRIHTGK-KPYKCD 311
Query: 276 ACNE 279
C +
Sbjct: 312 ECGK 315
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 29.3 bits (64), Expect = 4.2
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 180 EYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHEC 239
E G+ L+ ++ LPVVF+ +GG L + G LQ +L ++ P +
Sbjct: 4 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLL----KMNGPEDL 59
Query: 240 P 240
P
Sbjct: 60 P 60
>gi|170784831 chromosome 1 open reading frame 9 protein isoform 2
[Homo sapiens]
Length = 1210
Score = 29.3 bits (64), Expect = 4.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 165 NHRVKFEEKNIALNGEYGKELDERCRRVSE 194
N+R+K E N++L+G Y +EL +R R+ E
Sbjct: 875 NNRIKALEVNMSLSGRYLEELSQRYRKQME 904
>gi|7656940 chromosome 1 open reading frame 9 protein isoform 1
[Homo sapiens]
Length = 1254
Score = 29.3 bits (64), Expect = 4.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 165 NHRVKFEEKNIALNGEYGKELDERCRRVSE 194
N+R+K E N++L+G Y +EL +R R+ E
Sbjct: 919 NNRIKALEVNMSLSGRYLEELSQRYRKQME 948
>gi|55741874 zinc finger protein 484 isoform b [Homo sapiens]
Length = 816
Score = 29.3 bits (64), Expect = 4.2
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 186 DERCRRVSEAPSLP---VVFIDGHYLGGAEKILSMNESGELQDILTK-IERVQHPHECPS 241
DE R+ E + P VVFI+ L + I + GE+ + T + + PH C S
Sbjct: 86 DEHTRKCGENQNKPLSRVVFINKKTLAN-DSIFEYKDIGEIVHVNTHLVSSRKRPHNCNS 144
Query: 242 CG 243
CG
Sbjct: 145 CG 146
>gi|55741876 zinc finger protein 484 isoform a [Homo sapiens]
Length = 852
Score = 29.3 bits (64), Expect = 4.2
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 186 DERCRRVSEAPSLP---VVFIDGHYLGGAEKILSMNESGELQDILTK-IERVQHPHECPS 241
DE R+ E + P VVFI+ L + I + GE+ + T + + PH C S
Sbjct: 122 DEHTRKCGENQNKPLSRVVFINKKTLAN-DSIFEYKDIGEIVHVNTHLVSSRKRPHNCNS 180
Query: 242 CG 243
CG
Sbjct: 181 CG 182
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 28.9 bits (63), Expect = 5.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 30 KEVYEDGQPSGSLDSECASICGIDGLGDSDGQQNGHIESEGDENEN 75
K ++ D SG D E D + + DG +NG + E +E EN
Sbjct: 430 KAIFGDEDESGDSDDE-----EDDEMSEDDGLENGSSDEEAEEEEN 470
>gi|50959205 adenylate cyclase 9 [Homo sapiens]
Length = 1353
Score = 28.5 bits (62), Expect = 7.2
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 173 KNIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIER 232
K ++G+ KE RC +EA IDG + + SG + D+ ++
Sbjct: 567 KTYLISGQRAKE--SRCS-CAEALLSGFEVIDGSQVSSGPRGQGTASSGNVSDLAQTVKT 623
Query: 233 VQHPHECPSCG 243
+ CPSCG
Sbjct: 624 FDNLKTCPSCG 634
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,460,289
Number of Sequences: 37866
Number of extensions: 523597
Number of successful extensions: 1945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1910
Number of HSP's gapped (non-prelim): 43
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.