Guide to the Human Genome
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Name: BPIL1 Sequence: fasta or formatted (458aa) NCBI GI: 15055535
Description:

bactericidal/permeability-increasing protein-like 1

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         38           3
 C cysteine            0.4          2           1
 D aspartate           3.1         14           2
 E glutamate           3.3         15           1
 F phenylalanine       4.1         19           1
 G glycine             6.3         29           1
 H histidine           2.4         11           1
 I isoleucine          4.1         19           2
 K lysine              2.8         13           1
 L leucine            16.6         76           4
 M methionine          1.5          7           1
 N asparagine          4.4         20           2
 P proline             5.7         26           1
 Q glutamine           4.1         19           2
 R arginine            4.1         19           1
 S serine              8.5         39           2
 T threonine           6.3         29           2
 V valine             11.8         54           3
 W tryptophan          0.4          2           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bactericidal/permeability-increasing protein-like 1 ... 
C20orf185             0.135   antimicrobial peptide RYA3 
C20orf186             0.131   antimicrobial peptide RY2G5 
BPIL2                 0.113   bactericidal/permeability-increasing protein-like 2 ...
BPIL3                 0.099   bactericidal/permeability-increasing protein-like 3 ...
BPI                   0.088   bactericidal/permeability-increasing protein precur...
LBP                   0.068   lipopolysaccharide-binding protein precursor 
PLTP                  0.023   phospholipid transfer protein isoform a precursor [Ho...
PLTP                  0.015   phospholipid transfer protein isoform b precursor [H...
FOXRED2               0.011   FAD-dependent oxidoreductase domain containing 2 [H...
FOXRED2               0.011   FAD-dependent oxidoreductase domain containing 2 [H...
DCXR                  0.008   dicarbonyl/L-xylulose reductase 
CDH26                 0.008   cadherin-like 26 isoform a 
PKHD1L1               0.005   fibrocystin L 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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