Guide to the Human Genome
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Name: BPIL3 Sequence: fasta or formatted (453aa) NCBI GI: 28372525
Description:

bactericidal/permeability-increasing protein-like 3

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         32           2
 C cysteine            1.1          5           1
 D aspartate           3.5         16           1
 E glutamate           4.9         22           2
 F phenylalanine       3.5         16           1
 G glycine             6.0         27           2
 H histidine           1.5          7           1
 I isoleucine          5.1         23           2
 K lysine              7.3         33           2
 L leucine            14.3         65           3
 M methionine          4.9         22           1
 N asparagine          4.6         21           1
 P proline             6.0         27           2
 Q glutamine           4.2         19           3
 R arginine            2.6         12           1
 S serine              6.4         29           3
 T threonine           6.8         31           2
 V valine              7.7         35           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bactericidal/permeability-increasing protein-like 3 ... 
C20orf186             0.214   antimicrobial peptide RY2G5 
C20orf185             0.152   antimicrobial peptide RYA3 
BPIL1                 0.098   bactericidal/permeability-increasing protein-like 1 ...
BPI                   0.067   bactericidal/permeability-increasing protein precur...
LBP                   0.058   lipopolysaccharide-binding protein precursor 
BPIL2                 0.052   bactericidal/permeability-increasing protein-like 2 ...
KDM5B                 0.009   jumonji, AT rich interactive domain 1B 
FAM114A2              0.009   hypothetical protein LOC10827 
LOC100293440          0.006   PREDICTED: similar to Ig lambda chain 
ZNF292                0.006   zinc finger protein 292 
HEATR3                0.006   HEAT repeat containing 3 
ABHD11                0.005   abhydrolase domain containing 11 isoform 1 
ABHD11                0.005   abhydrolase domain containing 11 isoform 2 
GPR112                0.005   G-protein coupled receptor 112 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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