Guide to the Human Genome
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Name: SERPINB1 Sequence: fasta or formatted (379aa) NCBI GI: 13489087
Description:

serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 1

Referenced in:

Macrophages and Monocytes
Neutrophils, Eosinophils, and Basophils
Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         30           4
 C cysteine            0.5          2           1
 D aspartate           4.7         18           2
 E glutamate           7.9         30           2
 F phenylalanine       7.1         27           2
 G glycine             5.3         20           1
 H histidine           1.8          7           1
 I isoleucine          5.0         19           1
 K lysine              7.7         29           3
 L leucine            10.8         41           2
 M methionine          3.2         12           2
 N asparagine          6.1         23           2
 P proline             3.2         12           1
 Q glutamine           2.9         11           1
 R arginine            3.7         14           1
 S serine              8.2         31           2
 T threonine           5.8         22           2
 V valine              4.7         18           1
 W tryptophan          0.8          3           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine (or cysteine) proteinase inhibitor, clade B (... 
SERPINB9              0.489   serpin peptidase inhibitor, clade B, member 9 
SERPINB8              0.479   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.479   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB6              0.474   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB2              0.464   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB2              0.464   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB4              0.452   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB3              0.450   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB10             0.439   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB13             0.432   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB11             0.421   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINB5              0.399   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB12             0.399   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB7              0.348   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB7              0.348   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINC1              0.323   serpin peptidase inhibitor, clade C, member 1 
SERPINB8              0.291   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINI2              0.268   serpin peptidase inhibitor, clade I (pancpin), member...
SERPINI1              0.258   neuroserpin precursor 
SERPINI1              0.258   neuroserpin precursor 
SERPINA3              0.251   serpin peptidase inhibitor, clade A, member 3 precur...
SERPIND1              0.239   heparin cofactor II precursor 
SERPINA9              0.233   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINE2              0.227   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.227   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.227   plasminogen activator inhibitor type 1, member 2 is...
SERPINA5              0.227   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINE2              0.225   plasminogen activator inhibitor type 1, member 2 iso...
SERPINH1              0.217   serine (or cysteine) proteinase inhibitor, clade H, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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