Search of human proteins with 27735127

Search of human proteins with 27735127

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27735127 solute carrier family 35, member F3 [Homo sapiens]
         (490 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27735127 solute carrier family 35, member F3 [Homo sapiens]        986   0.0  
gi|122937311 solute carrier family 35, member F4 [Homo sapiens]       451   e-127
gi|21361959 solute carrier family 35, member F5 [Homo sapiens]         59   1e-08
gi|31542943 solute carrier family 35, member F2 [Homo sapiens]         58   2e-08
gi|189027121 solute carrier family 35, member F1 [Homo sapiens]        48   2e-05
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]          39   0.014
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]         36   0.091
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               34   0.34 
gi|22547161 frizzled 4 [Homo sapiens]                                  33   0.59 
gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo ...    31   2.2  
gi|4505105 MAS1 oncogene [Homo sapiens]                                30   3.8  
gi|4885311 lysophosphatidic acid receptor 4 [Homo sapiens]             30   3.8  
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...    30   6.5  
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...    30   6.5  
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...    30   6.5  
gi|216547942 solute carrier family 35, member B3 [Homo sapiens]        30   6.5  
gi|216547920 solute carrier family 35, member B3 [Homo sapiens]        30   6.5  
gi|21361503 solute carrier family 35, member B3 [Homo sapiens]         30   6.5  
gi|21361449 solute carrier family 2 (facilitated glucose transpo...    29   8.5  

>gi|27735127 solute carrier family 35, member F3 [Homo sapiens]
          Length = 490

 Score =  986 bits (2549), Expect = 0.0
 Identities = 490/490 (100%), Positives = 490/490 (100%)

Query: 1   MGIREFPSGAPRGKSIAVGMRRSPDVSPRRLSDISPQLRQLKYLVVDEAIKEDLKWSRSV 60
           MGIREFPSGAPRGKSIAVGMRRSPDVSPRRLSDISPQLRQLKYLVVDEAIKEDLKWSRSV
Sbjct: 1   MGIREFPSGAPRGKSIAVGMRRSPDVSPRRLSDISPQLRQLKYLVVDEAIKEDLKWSRSV 60

Query: 61  EDLTSGPVGLTSIEERILRITGYYGYQPWAASCKREERPRDSPGPAEAQAPAGVEAGGRA 120
           EDLTSGPVGLTSIEERILRITGYYGYQPWAASCKREERPRDSPGPAEAQAPAGVEAGGRA
Sbjct: 61  EDLTSGPVGLTSIEERILRITGYYGYQPWAASCKREERPRDSPGPAEAQAPAGVEAGGRA 120

Query: 121 SRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNFLF 180
           SRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNFLF
Sbjct: 121 SRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNFLF 180

Query: 181 FPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHA 240
           FPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHA
Sbjct: 181 FPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHA 240

Query: 241 IKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHS 300
           IKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHS
Sbjct: 241 IKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHS 300

Query: 301 VIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKV 360
           VIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKV
Sbjct: 301 VIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKV 360

Query: 361 EYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYTSQ 420
           EYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYTSQ
Sbjct: 361 EYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYTSQ 420

Query: 421 IVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEPAEGAADLSSGPQSK 480
           IVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEPAEGAADLSSGPQSK
Sbjct: 421 IVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEPAEGAADLSSGPQSK 480

Query: 481 NRRARPSFAR 490
           NRRARPSFAR
Sbjct: 481 NRRARPSFAR 490


>gi|122937311 solute carrier family 35, member F4 [Homo sapiens]
          Length = 521

 Score =  451 bits (1161), Expect = e-127
 Identities = 213/364 (58%), Positives = 274/364 (75%), Gaps = 1/364 (0%)

Query: 119 RASRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNF 178
           R   RC +C+   LK I WG+ ++L V SSW G+TQ+ K+T++ F  PF +TWF+TNWN 
Sbjct: 149 RIKARCLSCTSMVLKGI-WGLLIILSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNI 207

Query: 179 LFFPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYL 238
           +FFP+YY GH+  + EKQS  +++REC R FG++GLTLK+F  + APF +LWTLTNYLYL
Sbjct: 208 MFFPVYYSGHLATAQEKQSPMKKFRECSRIFGEDGLTLKLFLKRTAPFSILWTLTNYLYL 267

Query: 239 HAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHS 298
            A+KK+  TDVS LFCCNKAFVFLLSWIVL+DRFMGVRIVAAI+AI GIVMM YAD FH+
Sbjct: 268 LALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHA 327

Query: 299 HSVIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFT 358
            S+IG+A  V SAS SALYKVLFK+ LGSA FGEAA F+S LG FN++FI+  P+ILYFT
Sbjct: 328 DSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLGFFNLIFISFTPVILYFT 387

Query: 359 KVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYT 418
           KVE+WSSF  +PWG LCG + L L FNI++N G+ +TYP L+S+G VLS+P NA +D   
Sbjct: 388 KVEHWSSFAALPWGCLCGMAGLWLAFNILVNVGVVLTYPILISIGTVLSVPGNAAVDLLK 447

Query: 419 SQIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEPAEGAADLSSGPQ 478
            +++FN VR+ A III +GFLL+LLPEEWD   ++ +  LK +K EE  +   D S   +
Sbjct: 448 QEVIFNVVRLAATIIICIGFLLMLLPEEWDEITLRFINSLKEKKSEEHVDDVTDPSIHLR 507

Query: 479 SKNR 482
            + R
Sbjct: 508 GRGR 511


>gi|21361959 solute carrier family 35, member F5 [Homo sapiens]
          Length = 523

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 226 FGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLR---DRFMGVRIVAAIL 282
           F  +W L N  Y  A+       V++L   +  F  +L+ +      DRF   +++A IL
Sbjct: 247 FCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVIL 306

Query: 283 AIAGIVMMTYADGFH--SHSVIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSIL 340
           +I G+V++  A          +G    +A A + A+Y V+ K  +      +  +F   +
Sbjct: 307 SIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFV 366

Query: 341 GVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVLLLT--FNIVLN-----FGIA 393
           G+FN+L +     +L++T       F+D  + N      +++      VL+     +G  
Sbjct: 367 GLFNLLLLWPGFFLLHYT------GFEDFEFPNKVVLMCIIINGLIGTVLSEFLWLWGCF 420

Query: 394 VTYPTLMSLGIVLSIPVNAVIDHYTSQIVFNGVRVIAIIIIGLGFLLLLLPEEWDVW 450
           +T   + +L + L+IP++ + D    ++ F+ +     I +   F ++ L   ++ W
Sbjct: 421 LTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNW 477



 Score = 33.9 bits (76), Expect = 0.34
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 131 QLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNFLFFPLYYVGHVC 190
           Q +++  G+ ++L V   W  S++L    F +++ PF  T+  T+     F LY +G + 
Sbjct: 65  QRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTS----MFVLYLLGFII 120

Query: 191 -KSTEKQSVKQRYRECCRFFGD 211
            K   +Q  +    +   FF D
Sbjct: 121 WKPWRQQCTRGLRGKHAAFFAD 142


>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
          Length = 374

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 43/322 (13%)

Query: 132 LKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTWFATNWNFLFFPLYYVGHVCK 191
           LK I  G  + LC+C +   S  LA+    K + P   ++   N+  LF  +Y V    +
Sbjct: 40  LKTIALGQMLSLCICGTAITSQYLAERY--KVNTPMLQSFI--NYCLLFL-IYTVMLAFR 94

Query: 192 STEKQSVKQRYRECCRFFGDNGLT-LKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVS 250
           S                  DN L  LK  + K    G+     NY+ + A +    T V 
Sbjct: 95  SGS----------------DNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQ 138

Query: 251 VLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYA-------DGFHSHSVIG 303
           +L C     +  LSW +L  R+  +  +A  + + G+  M  A       D   S  +IG
Sbjct: 139 LLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIG 198

Query: 304 IALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKVEYW 363
             LV+  AS+ A+  V  + ++      E   FL ++G+F  + I+ I +++    VEY 
Sbjct: 199 DILVLLGASLYAISNVCEEYIVKKLSRQE---FLGMVGLFGTI-ISGIQLLI----VEY- 249

Query: 364 SSFDDIPWG-----NLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYT 418
                I W          F++ +      +   I VT  T ++LGI+ +   +  +  + 
Sbjct: 250 KDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFL 309

Query: 419 SQIVFNGVRVIAIIIIGLGFLL 440
               F+G+ +++  +I +GF+L
Sbjct: 310 FGYKFSGLYILSFTVIMVGFIL 331


>gi|189027121 solute carrier family 35, member F1 [Homo sapiens]
          Length = 408

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 21/226 (9%)

Query: 227 GVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAG 286
           G++    NYL + A +    T + +L C     V LLSW  L  R+  V  +  ++ I G
Sbjct: 136 GLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILG 195

Query: 287 IVMMTYAD-------GFHSHSVIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSI 339
           +  M  AD       G   + ++G  LV+  A++  +  V  + ++ +    E   FL +
Sbjct: 196 MGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVE---FLGM 252

Query: 340 LGVFNILFITCIPIILYFTKVEYWSSFDDIPW----GNL-CGFSVLLLTFNIVLNFGIAV 394
           +G+F   F      I+   ++        +PW    G L  GFS  +      +   I  
Sbjct: 253 IGLFGAFFSGIQLAIMEHKELL------KVPWDWQIGLLYVGFSACMFGLYSFMPVVIKK 306

Query: 395 TYPTLMSLGIVLSIPVNAVIDHYTSQIVFNGVRVIAIIIIGLGFLL 440
           T  T ++L ++ +   +     +     F+G+ +++   I +G +L
Sbjct: 307 TSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVL 352


>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
          Length = 364

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 76/369 (20%), Positives = 131/369 (35%), Gaps = 82/369 (22%)

Query: 98  RPRDSPGPAEAQAP----------------AGVEAGGRASR-RCWTCSRAQLKKIFWGVA 140
           RP+DS G AE Q P                A  EA G   R RCW               
Sbjct: 2   RPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCW--------------- 46

Query: 141 VVLCVCSSWAGSTQLAKLTFRKFDAP------FTLTWFATNWNFLFFPLYYVGHVCKSTE 194
             LC+ S     T+ AK   +K   P        L+ F  +   LF       H  + + 
Sbjct: 47  --LCLSSPCCSRTEPAK---KKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISA 101

Query: 195 KQSVKQR--------YRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINT 246
            + V Q         YR+   F G  G  + +        GVL +    L  +A + ++ 
Sbjct: 102 FRCVFQMLVVIPCLIYRKT-GFIGPKGQRIFLILR-----GVLGSTAMMLIYYAYQTMSL 155

Query: 247 TDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIAL 306
            D +V+   +  F  + +WI L++++     +  +  I G++++            G+  
Sbjct: 156 ADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGM-- 213

Query: 307 VVASASMSALYKVLFKLLLGSAKFGEAALFL---------SILGVFNILFITCIPIILYF 357
                S S   K  F   +GSA F  + L +           L ++  + +  +  ++  
Sbjct: 214 ---EESYSGHLKGTF-AAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIIL 269

Query: 358 TKVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSL---GIVLSIPVNAVI 414
           + +  WS    +P+   CG   L L F  +   G  +     + +   G V  +    V+
Sbjct: 270 SVLGEWS----LPY---CGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVV 322

Query: 415 DHYTSQIVF 423
             +  QI+F
Sbjct: 323 FAFIFQIIF 331


>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
          Length = 365

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 73/364 (20%), Positives = 127/364 (34%), Gaps = 71/364 (19%)

Query: 98  RPRDSPGPAEAQAP----------------AGVEAGGRASR-RCWTCSRAQLKKIFWGVA 140
           RP+DS G AE Q P                A  EA G   R RCW C  +          
Sbjct: 2   RPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSP--------- 52

Query: 141 VVLCVCSSWAGSTQLAKLTFRKFDAPFTL-TWFATNWNFLFFPLYYVGHVCKSTEKQSVK 199
                C S        K         +TL + F  +   LF       H  + +  + V 
Sbjct: 53  -----CCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVF 107

Query: 200 QR--------YRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVSV 251
           Q         YR+   F G  G  + +        GVL +    L  +A + ++  D +V
Sbjct: 108 QMLVVIPCLIYRKT-GFIGPKGQRIFLILR-----GVLGSTAMMLIYYAYQTMSLADATV 161

Query: 252 LFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVASA 311
           +   +  F  + +WI L++++     +  +  I G++++            G+       
Sbjct: 162 ITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGM-----EE 216

Query: 312 SMSALYKVLFKLLLGSAKFGEAALFL---------SILGVFNILFITCIPIILYFTKVEY 362
           S S   K  F   +GSA F  + L +           L ++  + +  +  ++  + +  
Sbjct: 217 SYSGHLKGTF-AAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGE 275

Query: 363 WSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSL---GIVLSIPVNAVIDHYTS 419
           WS    +P+   CG   L L F  +   G  +     + +   G V  +    V+  +  
Sbjct: 276 WS----LPY---CGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIF 328

Query: 420 QIVF 423
           QI+F
Sbjct: 329 QIIF 332


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 64  TSGPVGLTSIEERILRITGY---YGYQPWAASCKREERPRDSPGPAEAQAPA 112
           TSGP+GL  + ++ L +T +       P  A       P  SP PA AQAPA
Sbjct: 685 TSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPAPAPAPSPAPARAQAPA 736


>gi|22547161 frizzled 4 [Homo sapiens]
          Length = 537

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 257 KAFVFLLSWIVLRDRFMGVRIVAA--ILAIAGIVMMTYADGFHSHSVIGIALVVASASMS 314
           K  V L+  +V  D   G+  V    + A+ G V+        ++ VIG   +  +A + 
Sbjct: 358 KTIVILIMRLVDADELTGLCYVGNQNLDALTGFVVAP----LFTYLVIGTLFI--AAGLV 411

Query: 315 ALYKVLFKLLLGSAKFGEAALFLSILGVFNILF---ITCIPIILYFTKVEYWSSF 366
           AL+K+   L     K  +    +  +GVF++L+    TC+ I  YF ++  W+ F
Sbjct: 412 ALFKIRSNLQKDGTKTDKLERLMVKIGVFSVLYTVPATCV-IACYFYEISNWALF 465


>gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo
            sapiens]
          Length = 1464

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 255  CNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVA 309
            C  A    + W+ +R + MG  +V+   AIAGI ++ +  G  +  ++G++L  A
Sbjct: 1112 CQFATSATMQWLDIRLQLMGAAVVS---AIAGIALVQHQQGLANPGLVGLSLSYA 1163


>gi|4505105 MAS1 oncogene [Homo sapiens]
          Length = 325

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 335 LFLSILGVFNILFITCIPI-ILYFTKVEYWSSFDDIPWGNLCGFSVLLLTFNIVLN 389
           L++ I+    I  I  +P+ +LY    EYWS+F     GNL   S+L  T N   N
Sbjct: 226 LYIVIMVTIIIFLIFAMPMRLLYLLYYEYWSTF-----GNLHHISLLFSTINSSAN 276


>gi|4885311 lysophosphatidic acid receptor 4 [Homo sapiens]
          Length = 370

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 11/118 (9%)

Query: 315 ALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGN- 373
           +L+   F++ + S    E A+F++ L V ++LF+  +P  +++    +W      P+G+ 
Sbjct: 60  SLFVFCFRMKMRS----ETAIFITNLAVSDLLFVCTLPFKIFYNFNRHW------PFGDT 109

Query: 374 LCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVIDHYTSQIVFNGVRVIAI 431
           LC  S      NI  +            L IV       +     S IV  GV ++ +
Sbjct: 110 LCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVL 167


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 27  SPRRLSDISPQ----LRQLKYLVVDEAIKE-DLKWSRSVEDLTSGPVGLTSIEER 76
           +P RL DI  +    L+Q+KYLV+DEA +  D+ +   ++ L S P G+ S E+R
Sbjct: 422 TPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP-GMPSKEQR 475


>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
           [Homo sapiens]
          Length = 724

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 27  SPRRLSDISPQ----LRQLKYLVVDEAIKE-DLKWSRSVEDLTSGPVGLTSIEER 76
           +P RL DI  +    L+Q+KYLV+DEA +  D+ +   ++ L S P G+ S E+R
Sbjct: 422 TPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP-GMPSKEQR 475


>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
           [Homo sapiens]
          Length = 690

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 27  SPRRLSDISPQ----LRQLKYLVVDEAIKE-DLKWSRSVEDLTSGPVGLTSIEER 76
           +P RL DI  +    L+Q+KYLV+DEA +  D+ +   ++ L S P G+ S E+R
Sbjct: 388 TPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP-GMPSKEQR 441


>gi|216547942 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 251 VLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIA-GIVMMTYAD-----GFHSHSVIGI 304
           V+F C K    +L  + ++ +   V  V+A + ++ G++  T AD      F+   V+ I
Sbjct: 173 VIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLI 232

Query: 305 ALVV-ASASMSALYKVLFKLLLGSAKFGEAALFLSILG-VFNILFITCI----PIILYFT 358
           +L + A A +  + +   K  L +A   E  L+   +G V+ +L +TC     P + +  
Sbjct: 233 SLALCADAVIGNVQEKAMK--LHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCA 290

Query: 359 KVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFG--IAVTYPT-LMSLGIVLSIPVNAVID 415
           K     ++      +L G+  +     ++  FG  IAVT  T   ++ IVLS    A   
Sbjct: 291 KNPV-RTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA--K 347

Query: 416 HYTSQIVFNGVRVIAIIIIGL 436
            +T Q V++G+ V+  I + +
Sbjct: 348 PFTFQYVWSGLLVVLGIFLNV 368


>gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 251 VLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIA-GIVMMTYAD-----GFHSHSVIGI 304
           V+F C K    +L  + ++ +   V  V+A + ++ G++  T AD      F+   V+ I
Sbjct: 173 VIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLI 232

Query: 305 ALVV-ASASMSALYKVLFKLLLGSAKFGEAALFLSILG-VFNILFITCI----PIILYFT 358
           +L + A A +  + +   K  L +A   E  L+   +G V+ +L +TC     P + +  
Sbjct: 233 SLALCADAVIGNVQEKAMK--LHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCA 290

Query: 359 KVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFG--IAVTYPT-LMSLGIVLSIPVNAVID 415
           K     ++      +L G+  +     ++  FG  IAVT  T   ++ IVLS    A   
Sbjct: 291 KNPV-RTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA--K 347

Query: 416 HYTSQIVFNGVRVIAIIIIGL 436
            +T Q V++G+ V+  I + +
Sbjct: 348 PFTFQYVWSGLLVVLGIFLNV 368


>gi|21361503 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 251 VLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIA-GIVMMTYAD-----GFHSHSVIGI 304
           V+F C K    +L  + ++ +   V  V+A + ++ G++  T AD      F+   V+ I
Sbjct: 173 VIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLI 232

Query: 305 ALVV-ASASMSALYKVLFKLLLGSAKFGEAALFLSILG-VFNILFITCI----PIILYFT 358
           +L + A A +  + +   K  L +A   E  L+   +G V+ +L +TC     P + +  
Sbjct: 233 SLALCADAVIGNVQEKAMK--LHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCA 290

Query: 359 KVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFG--IAVTYPT-LMSLGIVLSIPVNAVID 415
           K     ++      +L G+  +     ++  FG  IAVT  T   ++ IVLS    A   
Sbjct: 291 KNPV-RTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA--K 347

Query: 416 HYTSQIVFNGVRVIAIIIIGL 436
            +T Q V++G+ V+  I + +
Sbjct: 348 PFTFQYVWSGLLVVLGIFLNV 368


>gi|21361449 solute carrier family 2 (facilitated glucose
           transporter), member 8 [Homo sapiens]
          Length = 477

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 295 GFHSHSVIGIALVVASASMSALYKVLF--KLLLGSAKFGEAALFLSILGVFNILFITCIP 352
           G +   +IG++L+ A   +S +  V+F  + +   AKF +++L   ++GV  +LF     
Sbjct: 252 GIYKPFIIGVSLM-AFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAA 310

Query: 353 IIL 355
           +I+
Sbjct: 311 LIM 313


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,079,350
Number of Sequences: 37866
Number of extensions: 782045
Number of successful extensions: 3238
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3212
Number of HSP's gapped (non-prelim): 29
length of query: 490
length of database: 18,247,518
effective HSP length: 106
effective length of query: 384
effective length of database: 14,233,722
effective search space: 5465749248
effective search space used: 5465749248
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.