Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LPAR4 Sequence: fasta or formatted (370aa) NCBI GI: 4885311
Description:

lysophosphatidic acid receptor 4

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         19           1
 C cysteine            3.5         13           2
 D aspartate           2.7         10           2
 E glutamate           3.0         11           2
 F phenylalanine       9.5         35           1
 G glycine             4.1         15           2
 H histidine           0.8          3           1
 I isoleucine          8.1         30           2
 K lysine              4.3         16           3
 L leucine            10.3         38           2
 M methionine          2.4          9           1
 N asparagine          6.2         23           2
 P proline             3.2         12           1
 Q glutamine           1.9          7           1
 R arginine            5.1         19           2
 S serine              8.6         32           2
 T threonine           9.2         34           3
 V valine              7.8         29           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysophosphatidic acid receptor 4 
LPAR6                 0.482   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.482   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.482   G-protein coupled purinergic receptor P2Y5 
LPAR5                 0.244   lysophosphatidic acid receptor 5 
LPAR5                 0.244   lysophosphatidic acid receptor 5 
GPR174                0.229   putative purinergic receptor FKSG79 
P2RY10                0.226   G-protein coupled purinergic receptor P2Y10 
P2RY10                0.226   G-protein coupled purinergic receptor P2Y10 
P2RY8                 0.212   G-protein coupled purinergic receptor P2Y8 
P2RY4                 0.208   pyrimidinergic receptor P2Y4 
P2RY1                 0.207   purinergic receptor P2Y1 
GPR17                 0.204   G protein-coupled receptor 17 isoform b 
GPR17                 0.204   G protein-coupled receptor 17 isoform b 
GPR17                 0.204   G protein-coupled receptor 17 isoform a 
GPR17                 0.204   G protein-coupled receptor 17 isoform a 
CYSLTR2               0.203   cysteinyl leukotriene receptor 2 
CYSLTR1               0.198   cysteinyl leukotriene receptor 1 
GPR183                0.198   EBV-induced G protein-coupled receptor 2 
P2RY2                 0.196   purinergic receptor P2Y2 
P2RY2                 0.196   purinergic receptor P2Y2 
P2RY2                 0.196   purinergic receptor P2Y2 
F2R                   0.196   coagulation factor II receptor precursor 
CCR4                  0.194   chemokine (C-C motif) receptor 4 
F2RL1                 0.187   coagulation factor II (thrombin) receptor-like 1 pre...
P2RY6                 0.186   pyrimidinergic receptor P2Y6 
P2RY6                 0.186   pyrimidinergic receptor P2Y6 
P2RY6                 0.186   pyrimidinergic receptor P2Y6 
P2RY6                 0.186   pyrimidinergic receptor P2Y6 
AGTR1                 0.186   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press