Guide to the Human Genome
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Name: SYTL2 Sequence: fasta or formatted (365aa) NCBI GI: 46255068
Description:

synaptotagmin-like 2 isoform f

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [376aa] synaptotagmin-like 2 isoform b
alt prot [910aa] synaptotagmin-like 2 isoform a
alt prot [934aa] synaptotagmin-like 2 isoform g
alt prot [336aa] synaptotagmin-like 2 isoform h
alt prot [935aa] synaptotagmin-like 2 isoform i
alt prot [1272aa] synaptotagmin-like 2 isoform c
alt prot [1256aa] synaptotagmin-like 2 isoform d
alt prot [376aa] synaptotagmin-like 2 isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         16           3
 C cysteine            1.1          4           1
 D aspartate           5.2         19           2
 E glutamate           6.8         25           2
 F phenylalanine       2.7         10           1
 G glycine             5.5         20           2
 H histidine           1.9          7           1
 I isoleucine          3.6         13           1
 K lysine             10.1         37           3
 L leucine            11.2         41           2
 M methionine          2.7         10           1
 N asparagine          4.4         16           1
 P proline             4.4         16           1
 Q glutamine           3.0         11           1
 R arginine            4.4         16           1
 S serine              8.8         32           4
 T threonine           6.8         25           2
 V valine              7.1         26           2
 W tryptophan          2.5          9           1
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptotagmin-like 2 isoform f 
SYTL2                 0.999   synaptotagmin-like 2 isoform b 
SYTL2                 0.999   synaptotagmin-like 2 isoform i 
SYTL2                 0.999   synaptotagmin-like 2 isoform g 
SYTL2                 0.999   synaptotagmin-like 2 isoform e 
SYTL2                 0.999   synaptotagmin-like 2 isoform d 
SYTL2                 0.999   synaptotagmin-like 2 isoform c 
SYTL2                 0.899   synaptotagmin-like 2 isoform a 
SYTL2                 0.895   synaptotagmin-like 2 isoform h 
SYTL1                 0.424   synaptotagmin-like 1 
SYTL4                 0.370   synaptotagmin-like 4 
SYTL4                 0.370   synaptotagmin-like 4 
SYTL5                 0.321   synaptotagmin-like 5 isoform 1 
SYTL5                 0.321   synaptotagmin-like 5 isoform 1 
SYTL5                 0.318   synaptotagmin-like 5 isoform 2 
SYTL3                 0.238   synaptotagmin-like 3 
SYT3                  0.122   synaptotagmin III 
SYT3                  0.122   synaptotagmin III 
SYT3                  0.122   synaptotagmin III 
SYT6                  0.120   synaptotagmin VI 
SYT2                  0.119   synaptotagmin II 
SYT2                  0.119   synaptotagmin II 
RPH3A                 0.115   rabphilin 3A homolog isoform 1 
RPH3A                 0.115   rabphilin 3A homolog isoform 2 
SYT10                 0.115   synaptotagmin X 
DOC2B                 0.115   double C2-like domains, beta 
SYT1                  0.108   synaptotagmin I 
SYT1                  0.108   synaptotagmin I 
SYT1                  0.108   synaptotagmin I 
SYT9                  0.106   synaptotagmin IX 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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