Search of human proteins with 25092737

Search of human proteins with 25092737

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25092737 histone cluster 1, H2aa [Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    257   2e-69
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     240   3e-64
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  239   4e-64
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    239   4e-64
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    239   6e-64
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     239   6e-64
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     239   6e-64
gi|15617199 histone cluster 3, H2a [Homo sapiens]                     239   6e-64
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     239   6e-64
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     239   6e-64
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    238   8e-64
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    238   1e-63
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    238   1e-63
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    238   1e-63
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    238   1e-63
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    238   1e-63
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    237   2e-63
gi|29553970 H2A histone family, member J [Homo sapiens]               233   4e-62
gi|4504253 H2A histone family, member X [Homo sapiens]                228   8e-61
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      153   3e-38
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     153   3e-38
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     153   3e-38
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     153   3e-38
gi|8923920 H2A histone family, member Y2 [Homo sapiens]               150   3e-37
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      137   3e-33
gi|4504255 H2A histone family, member Z [Homo sapiens]                135   7e-33
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     123   4e-29
gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]          109   5e-25
gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]          109   5e-25
gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]          109   5e-25

>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  257 bits (656), Expect = 2e-69
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TESHHHKAQSK
Sbjct: 121 TESHHHKAQSK 131


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  240 bits (612), Expect = 3e-64
 Identities = 123/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  239 bits (610), Expect = 4e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  239 bits (610), Expect = 4e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNY+ER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  238 bits (608), Expect = 8e-64
 Identities = 119/124 (95%), Positives = 124/124 (100%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLA+RNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESH 124
           TESH
Sbjct: 121 TESH 124


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  238 bits (606), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 124/125 (99%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHH 125
           TESHH
Sbjct: 121 TESHH 125


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  238 bits (606), Expect = 1e-63
 Identities = 121/131 (92%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNY+ER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  238 bits (606), Expect = 1e-63
 Identities = 121/131 (92%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNY+ER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  238 bits (606), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 124/125 (99%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHH 125
           TESHH
Sbjct: 121 TESHH 125


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  238 bits (606), Expect = 1e-63
 Identities = 121/131 (92%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+K+RSSRAGLQFPVGR+HRLLRKGNY+ER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES HHKA+ K
Sbjct: 121 TES-HHKAKGK 130


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  237 bits (605), Expect = 2e-63
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 2/131 (1%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQSK 131
           TES  HKA+SK
Sbjct: 121 TES--HKAKSK 129


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  233 bits (593), Expect = 4e-62
 Identities = 118/129 (91%), Positives = 124/129 (96%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGKQGGK RAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHHKAQ 129
           TES   K++
Sbjct: 121 TESQKTKSK 129


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  228 bits (582), Expect = 8e-61
 Identities = 115/123 (93%), Positives = 121/123 (98%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAK+KSRSSRAGLQFPVGR+HRLLRKG+YAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES 123
           T +
Sbjct: 121 TSA 123


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  153 bits (387), Expect = 3e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%)

Query: 7   QGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   RIG GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNA+RDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  153 bits (387), Expect = 3e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%)

Query: 7   QGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   RIG GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNA+RDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  153 bits (387), Expect = 3e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%)

Query: 7   QGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   RIG GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNA+RDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  153 bits (387), Expect = 3e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%)

Query: 7   QGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   RIG GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNA+RDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  150 bits (379), Expect = 3e-37
 Identities = 79/120 (65%), Positives = 91/120 (75%), Gaps = 3/120 (2%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  RI  GAPVY+AAV+EYL 
Sbjct: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKK RI PRH+ LA+ NDEELN+LL GVTIA GGVLP I   LL KK
Sbjct: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  137 bits (344), Expect = 3e-33
 Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AK+ SRS RAGLQFPVGRIHR L+    +  R+GA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNAS+D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  135 bits (341), Expect = 7e-33
 Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+ K+ SRS RAGLQFPVGRIHR L+    +  R+GA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNAS+D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  123 bits (309), Expect = 4e-29
 Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 2/103 (1%)

Query: 5   GKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AK+ SRS RAGLQFPVGRIHR L+    +  R+GA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQG 106
           LELAGNAS+D K  RI PRHLQLAIR DEEL+ L+   TIA G
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGG 108


>gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  109 bits (273), Expect = 5e-25
 Identities = 66/124 (53%), Positives = 77/124 (62%), Gaps = 19/124 (15%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  ++K++ S   LQF  G +H LL KGNY E+I                
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEKI---------------- 44

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
              LELAGN + DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 45  ---LELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH 124
           TESH
Sbjct: 102 TESH 105


>gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  109 bits (273), Expect = 5e-25
 Identities = 66/124 (53%), Positives = 77/124 (62%), Gaps = 19/124 (15%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  ++K++ S   LQF  G +H LL KGNY E+I                
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEKI---------------- 44

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
              LELAGN + DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 45  ---LELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH 124
           TESH
Sbjct: 102 TESH 105


>gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  109 bits (273), Expect = 5e-25
 Identities = 66/124 (53%), Positives = 77/124 (62%), Gaps = 19/124 (15%)

Query: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  ++K++ S   LQF  G +H LL KGNY E+I                
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEKI---------------- 44

Query: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
              LELAGN + DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 45  ---LELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH 124
           TESH
Sbjct: 102 TESH 105


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,513,064
Number of Sequences: 37866
Number of extensions: 173752
Number of successful extensions: 546
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 61
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.