Search of human proteins with 122056685

Search of human proteins with 122056685

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122056685 peptidylarginine deiminase type I [Homo sapiens]
         (663 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122056685 peptidylarginine deiminase type I [Homo sapiens]        1364   0.0  
gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]      761   0.0  
gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]     753   0.0  
gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]      670   0.0  
gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]         557   e-158
gi|195546894 RAB, member RAS oncogene family-like 5 isoform c [H...    32   1.9  
gi|195546891 RAB, member RAS oncogene family-like 5 isoform c [H...    32   1.9  
gi|195546889 RAB, member RAS oncogene family-like 5 isoform b [H...    32   1.9  
gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Ho...    32   1.9  
gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo...    30   7.1  
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ...    30   9.3  
gi|166235138 seizure related 6 homolog (mouse)-like 2 isoform 3 ...    30   9.3  
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ...    30   9.3  
gi|6912612 seizure related 6 homolog (mouse)-like 2 isoform 1 [H...    30   9.3  

>gi|122056685 peptidylarginine deiminase type I [Homo sapiens]
          Length = 663

 Score = 1364 bits (3531), Expect = 0.0
 Identities = 663/663 (100%), Positives = 663/663 (100%)

Query: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60
           MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK
Sbjct: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60

Query: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120
           EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE
Sbjct: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120

Query: 121 VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM 180
           VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM
Sbjct: 121 VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM 180

Query: 181 SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEVER 240
           SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEVER
Sbjct: 181 SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEVER 240

Query: 241 QPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGTLPEVTLFTDTVGFRMAPWIMTPNT 300
           QPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGTLPEVTLFTDTVGFRMAPWIMTPNT
Sbjct: 241 QPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGTLPEVTLFTDTVGFRMAPWIMTPNT 300

Query: 301 QPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFGYIE 360
           QPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFGYIE
Sbjct: 301 QPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFGYIE 360

Query: 361 APHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPPVTV 420
           APHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPPVTV
Sbjct: 361 APHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPPVTV 420

Query: 421 GGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFLTFV 480
           GGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFLTFV
Sbjct: 421 GGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFLTFV 480

Query: 481 PTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRHLQRDN 540
           PTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRHLQRDN
Sbjct: 481 PTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRHLQRDN 540

Query: 541 LHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGKYLGIPK 600
           LHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGKYLGIPK
Sbjct: 541 LHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGKYLGIPK 600

Query: 601 PYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPFPFKWWN 660
           PYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPFPFKWWN
Sbjct: 601 PYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPFPFKWWN 660

Query: 661 MVP 663
           MVP
Sbjct: 661 MVP 663


>gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]
          Length = 663

 Score =  761 bits (1965), Expect = 0.0
 Identities = 381/669 (56%), Positives = 486/669 (72%), Gaps = 12/669 (1%)

Query: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60
           MA   +++++ + PTHAVCV+G    +DI S  P+   SF ++ S GV V + +     K
Sbjct: 1   MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK 60

Query: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120
           +  G + WPLD   ++ +++  AS    D KV++SY+G +      +++LYLTGV+ISL 
Sbjct: 61  KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPV--KALLYLTGVEISLC 118

Query: 121 VDTGRTGKVK--RSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQ 178
            D  RTGKVK  R+  D++TW WGP G GAILLVNCDRDN  S+  D     ++   DLQ
Sbjct: 119 ADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQ 178

Query: 179 DMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEV 238
           DMS M LS   P   F +H LVL+V  S+  +VRVF A  G   S    VLGP+  S+ +
Sbjct: 179 DMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYL 238

Query: 239 ERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGTL--PEVTLFTDTVGFRMAPWIM 296
               G+  + FYVE L FPD DF GL++L++SL+D   L  PE  +F D+V FR+APWIM
Sbjct: 239 MVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIM 298

Query: 297 TPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEF 356
           TPNTQPP+E+Y C + +    NE FL+ ++ L +KA CKLTICP+ EN +D+W+QDEME 
Sbjct: 299 TPNTQPPQEVYACSIFE----NEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEI 354

Query: 357 GYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSP 416
           GYI+APHK+ PVVFDSPRNRGLK+FP KR++GPDFGYVTR     G S LDSFGNL+VSP
Sbjct: 355 GYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSP 414

Query: 417 PVTVGGTEYPLGRILIGSS-FPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE 475
           PVTV G EYPLGRIL G S +P +  RQM +A+++FL AQQVQAPV+LYSDWLSVGHVDE
Sbjct: 415 PVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDE 474

Query: 476 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRH 535
           FL+FVP  D+KGFRLLLASP +C KLFQE++ EG+GEA  F+G+K + ++ I  +L+++ 
Sbjct: 475 FLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKT 534

Query: 536 LQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNF-YAEAFFPDMVNMVVLGK 594
           L+  N   ++CIDWNR +LKRELGLAESDI+DIPQLF LK F  AEAFFP+MVNM+VLGK
Sbjct: 535 LREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGK 594

Query: 595 YLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPF 654
           +LGIPKP+GP+INGRCCLEEKV SLLEPLGL C FI+D+ +YH   GE+HCGTNVRRKPF
Sbjct: 595 HLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPF 654

Query: 655 PFKWWNMVP 663
            FKWWNMVP
Sbjct: 655 SFKWWNMVP 663


>gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]
          Length = 664

 Score =  753 bits (1943), Expect = 0.0
 Identities = 385/669 (57%), Positives = 473/669 (70%), Gaps = 11/669 (1%)

Query: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60
           M+ +R+V++SL+ PT AVCV GVE  VDI+  VP+G   F V G+ GV++++  N  R +
Sbjct: 1   MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60

Query: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120
           E     RW  D   +++V + + S +L D  V++SY    E   L  +VLYLT VDISL+
Sbjct: 61  ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120

Query: 121 VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM 180
            D    G+  R+  DK+ W WGP GYG ILLVNCDRD+      D     +  L DL+DM
Sbjct: 121 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 180

Query: 181 SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSD-YKQVLGPQCLSYEVE 239
           S M+L   GP  LFD HKLVL+    D+KR +VF   G   + + Y+ VLG   +SYEV 
Sbjct: 181 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 240

Query: 240 RQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGT--LPEVTLFTDTVGFRMAPWIMT 297
           R  G++E +F+VEGL+FPDA F GL+S  V+L+D          +FTDTV FR+APWIMT
Sbjct: 241 RLHGDEE-RFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMT 299

Query: 298 PNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFG 357
           P+T PP E+YVCRV +    N  F++ ++ L  KA CKLTICPQ ENRNDRWIQDEME G
Sbjct: 300 PSTLPPLEVYVCRVRN----NTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELG 355

Query: 358 YIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPP 417
           Y++APHK+ PVVFDSPRN  L+DFPYKRILGPDFGYVTRE      S LDSFGNL+VSPP
Sbjct: 356 YVQAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPP 415

Query: 418 VTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFL 477
           V   G EYPLGRILIG + P S GR++ + VR+FL AQ+VQ PVEL+ DWL+VGHVDEFL
Sbjct: 416 VVANGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFL 475

Query: 478 TFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGL--KHQAKR-SINEMLADR 534
           +FVP  D KGFR+LLASP AC KLFQEK++ G+G A  F G+    Q K  SIN++L+++
Sbjct: 476 SFVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNK 535

Query: 535 HLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGK 594
            L   N   Q CIDWNR VLKRELGLAE DI+DIPQLF  +   A AFFPD+VNM+VLGK
Sbjct: 536 DLINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGK 595

Query: 595 YLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPF 654
           +LGIPKP+GPIING CCLEEKV+SLLEPLGLHC FIDD+  YH L GE+HCGTNV RKPF
Sbjct: 596 HLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPF 655

Query: 655 PFKWWNMVP 663
            FKWWNMVP
Sbjct: 656 SFKWWNMVP 664


>gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]
          Length = 665

 Score =  670 bits (1729), Expect = 0.0
 Identities = 350/671 (52%), Positives = 453/671 (67%), Gaps = 14/671 (2%)

Query: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60
           M  +R V+L       AV V+G     D++S  P GA +F +  S  V V +V  R    
Sbjct: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVV--RDGEA 58

Query: 61  EPI---GKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDI 117
           E +   GK RW L     + V++  AS E    KV V+Y+ E+    + ++ L+LT ++I
Sbjct: 59  EEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEI 118

Query: 118 SLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADL 177
           SL+VD  R G V+++   K +W WGPEG GAILLVNCDR+     + D     + S  DL
Sbjct: 119 SLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178

Query: 178 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 237
           +DMS M+L   GPD+L   +++VL +  SDS +V VF          Y  +LG + L + 
Sbjct: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238

Query: 238 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVD--PGTLPEVTLFTDTVGFRMAPWI 295
           V+   G  E+ F+VEGL FPD  F GLVS+ VSL++     +P   +FTDTV FR+APWI
Sbjct: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298

Query: 296 MTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEME 355
           MTPN  PP  ++VC + D    N  FL+++  L  K NC+L +C Q  NR DRWIQDE+E
Sbjct: 299 MTPNILPPVSVFVCCMKD----NYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIE 354

Query: 356 FGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVS 415
           FGYIEAPHK FPVV DSPR+  LKDFP K +LGPDFGYVTRE      +SLDSFGNL+VS
Sbjct: 355 FGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVS 414

Query: 416 PPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE 475
           PPVTV G  YPLGRILIGSSFP SGGR+M + VR+FLKAQQVQAPVELYSDWL+VGHVDE
Sbjct: 415 PPVTVNGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDE 474

Query: 476 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKR--SINEMLAD 533
           F++FVP    K F LL+AS SAC KLF+EK+++G+GEA  F GL   + +  +IN++L++
Sbjct: 475 FMSFVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSN 534

Query: 534 RHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-KNFYAEAFFPDMVNMVVL 592
             L ++NL+ Q+C+DWNR++LK+ELGL E DI+D+P LF + ++  A AFFP+MVNM+VL
Sbjct: 535 ESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVL 594

Query: 593 GKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRK 652
            K LGIPKP+GP +   CCLE  V+ LLEPLGL C FIDD  +YH+  GE+HCGTNVRRK
Sbjct: 595 DKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRK 654

Query: 653 PFPFKWWNMVP 663
           PF FKWW+MVP
Sbjct: 655 PFTFKWWHMVP 665


>gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]
          Length = 694

 Score =  557 bits (1436), Expect = e-158
 Identities = 308/693 (44%), Positives = 427/693 (61%), Gaps = 37/693 (5%)

Query: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60
           M+ + ++ LSL  P HAVCV+G E  +D+    P+    F + GS  V + +       K
Sbjct: 9   MSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK 68

Query: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120
           E      WPL       V + + S  +   KV V+Y+G  ED  +G +VLYLTG+++SLE
Sbjct: 69  ED-ATIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLE 127

Query: 121 VDTGRTGKVKRSQGD--KKTWRWGPEGYGAILLVNCD-RDNHRSAEPDLTHSWLMSLADL 177
           VD  R G+V+ S     KK W WGP G+GAILLVNC+  D  +  E   T   + S  ++
Sbjct: 128 VDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFS-EEI 186

Query: 178 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 237
            ++S M L+  GP  +   ++LVL+    +SK+ RV+  +  NS S ++ VLGP   +Y 
Sbjct: 187 TNLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDNS-STFELVLGPDQHAYT 245

Query: 238 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPG---TLPEVTLFTDTVGFRMAPW 294
           +       +  FYVE + FP A+F GL+S SVSLV+     ++PE  L+ DTV FR+AP 
Sbjct: 246 LALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVFRVAPC 305

Query: 295 IMTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEM 354
           +  P TQ P E+Y+CR +   G    F++ ++ L+ K+N ++    +  NR  RW+QDEM
Sbjct: 306 VFIPCTQVPLEVYLCRELQLQG----FVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEM 361

Query: 355 EFGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDV 414
            F Y +APHK+  ++ D+P+   L +FP K  L P  GY+ ++      +S+DS GNL V
Sbjct: 362 AFCYTQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMV 421

Query: 415 SPPVTVGGTEYPLGRILIGSSF-PKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHV 473
           SPPV V G EYPLGR+LIGSSF P + GR M++ +R+FL AQQVQAPVELYSDWL  GHV
Sbjct: 422 SPPVKVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHV 481

Query: 474 DEFLTFVPTSDQ----KGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKH-------Q 522
           DEF+ F+PT D+    KGF LLLASPSAC KLF+EK++EGYG+A  FD L+        +
Sbjct: 482 DEFMCFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGR 541

Query: 523 AKRSINEMLADRHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-------- 574
             ++I+++LAD  L++ N + +KCI  NR++LK ELGL E DI++IPQLF L        
Sbjct: 542 EAKTIDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPS 601

Query: 575 ----KNFYAEAFFPDMVNMVVLGKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFI 630
               K  +A  +FPD++ M+V+GK LGIPKP+GP I G CCLEEK+  LLEPLG  C FI
Sbjct: 602 DQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFI 661

Query: 631 DDYLSYHELQGEIHCGTNVRRKPFPFKWWNMVP 663
           +D+  Y    G+I    N+RR PF FKWW MVP
Sbjct: 662 NDFDCYLTEVGDICACANIRRVPFAFKWWKMVP 694


>gi|195546894 RAB, member RAS oncogene family-like 5 isoform c [Homo
           sapiens]
          Length = 108

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 144 EGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNV 203
           + +G +++ N D  +HR  E ++ +S  +    LQD   ML++ + P    D   L L+ 
Sbjct: 3   DAHGVVIVFNADIPSHRK-EMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 61

Query: 204 PFSDSKRV 211
           P +  K V
Sbjct: 62  PLNKLKLV 69


>gi|195546891 RAB, member RAS oncogene family-like 5 isoform c [Homo
           sapiens]
          Length = 108

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 144 EGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNV 203
           + +G +++ N D  +HR  E ++ +S  +    LQD   ML++ + P    D   L L+ 
Sbjct: 3   DAHGVVIVFNADIPSHRK-EMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 61

Query: 204 PFSDSKRV 211
           P +  K V
Sbjct: 62  PLNKLKLV 69


>gi|195546889 RAB, member RAS oncogene family-like 5 isoform b [Homo
           sapiens]
          Length = 155

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 144 EGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNV 203
           + +G +++ N D  +HR  E ++ +S  +    LQD   ML++ + P    D   L L+ 
Sbjct: 50  DAHGVVIVFNADIPSHRK-EMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 108

Query: 204 PFSDSKRV 211
           P +  K V
Sbjct: 109 PLNKLKLV 116


>gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Homo
           sapiens]
          Length = 185

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 144 EGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNV 203
           + +G +++ N D  +HR  E ++ +S  +    LQD   ML++ + P    D   L L+ 
Sbjct: 80  DAHGVVIVFNADIPSHRK-EMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 138

Query: 204 PFSDSKRV 211
           P +  K V
Sbjct: 139 PLNKLKLV 146


>gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo
           sapiens]
          Length = 3312

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 69  PLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVD------ISLEVD 122
           PL   A + V+V   +    +F ++  +    ED A+G SV+ +T VD      IS ++ 
Sbjct: 735 PLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDANSAISYQIT 794

Query: 123 TGRT 126
            G T
Sbjct: 795 GGNT 798


>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
           [Homo sapiens]
          Length = 809

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 139 WRWGPEG---YGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFD 195
           WR    G    G +L   C+          LT  W +S +        +++C  P ++ +
Sbjct: 540 WRTASHGDLIRGTVLTYQCEPGYELLGSDILTCQWDLSWSAAPPACQKIMTCADPGEIAN 599

Query: 196 SHKLVLNVPFSDSKRVRVFC-----ARGGNSLSDYKQVLG--------PQC-LSYEVERQ 241
            H+   +  F     V+  C       G   L+ Y +  G        P+C L YE    
Sbjct: 600 GHRTASDAGFPVGSHVQYRCLPGYSLEGAAMLTCYSRDTGTPKWSDRVPKCALKYEPCLN 659

Query: 242 PGEQE 246
           PG  E
Sbjct: 660 PGVPE 664


>gi|166235138 seizure related 6 homolog (mouse)-like 2 isoform 3
           [Homo sapiens]
          Length = 840

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 139 WRWGPEG---YGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFD 195
           WR    G    G +L   C+          LT  W +S +        +++C  P ++ +
Sbjct: 584 WRTASHGDLIRGTVLTYQCEPGYELLGSDILTCQWDLSWSAAPPACQKIMTCADPGEIAN 643

Query: 196 SHKLVLNVPFSDSKRVRVFC-----ARGGNSLSDYKQVLG--------PQC-LSYEVERQ 241
            H+   +  F     V+  C       G   L+ Y +  G        P+C L YE    
Sbjct: 644 GHRTASDAGFPVGSHVQYRCLPGYSLEGAAMLTCYSRDTGTPKWSDRVPKCALKYEPCLN 703

Query: 242 PGEQE 246
           PG  E
Sbjct: 704 PGVPE 708


>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
           [Homo sapiens]
          Length = 910

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 139 WRWGPEG---YGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFD 195
           WR    G    G +L   C+          LT  W +S +        +++C  P ++ +
Sbjct: 654 WRTASHGDLIRGTVLTYQCEPGYELLGSDILTCQWDLSWSAAPPACQKIMTCADPGEIAN 713

Query: 196 SHKLVLNVPFSDSKRVRVFC-----ARGGNSLSDYKQVLG--------PQC-LSYEVERQ 241
            H+   +  F     V+  C       G   L+ Y +  G        P+C L YE    
Sbjct: 714 GHRTASDAGFPVGSHVQYRCLPGYSLEGAAMLTCYSRDTGTPKWSDRVPKCALKYEPCLN 773

Query: 242 PGEQE 246
           PG  E
Sbjct: 774 PGVPE 778


>gi|6912612 seizure related 6 homolog (mouse)-like 2 isoform 1 [Homo
           sapiens]
          Length = 853

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 139 WRWGPEG---YGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFD 195
           WR    G    G +L   C+          LT  W +S +        +++C  P ++ +
Sbjct: 584 WRTASHGDLIRGTVLTYQCEPGYELLGSDILTCQWDLSWSAAPPACQKIMTCADPGEIAN 643

Query: 196 SHKLVLNVPFSDSKRVRVFC-----ARGGNSLSDYKQVLG--------PQC-LSYEVERQ 241
            H+   +  F     V+  C       G   L+ Y +  G        P+C L YE    
Sbjct: 644 GHRTASDAGFPVGSHVQYRCLPGYSLEGAAMLTCYSRDTGTPKWSDRVPKCALKYEPCLN 703

Query: 242 PGEQE 246
           PG  E
Sbjct: 704 PGVPE 708


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,583,110
Number of Sequences: 37866
Number of extensions: 1328466
Number of successful extensions: 2341
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2306
Number of HSP's gapped (non-prelim): 18
length of query: 663
length of database: 18,247,518
effective HSP length: 109
effective length of query: 554
effective length of database: 14,120,124
effective search space: 7822548696
effective search space used: 7822548696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.