Search of human proteins with 24638446

Search of human proteins with 24638446

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24638446 histone cluster 2, H2ac [Homo sapiens]
         (129 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    251   1e-67
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  244   1e-65
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    244   1e-65
gi|29553970 H2A histone family, member J [Homo sapiens]               243   2e-65
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    242   5e-65
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     242   5e-65
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     242   5e-65
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     242   5e-65
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     242   5e-65
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     242   5e-65
gi|15617199 histone cluster 3, H2a [Homo sapiens]                     241   1e-64
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    241   1e-64
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    240   2e-64
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    240   3e-64
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    240   3e-64
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    239   3e-64
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    239   3e-64
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    237   2e-63
gi|4504253 H2A histone family, member X [Homo sapiens]                228   1e-60
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      152   9e-38
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     152   9e-38
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     152   9e-38
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     152   9e-38
gi|8923920 H2A histone family, member Y2 [Homo sapiens]               149   8e-37
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      140   2e-34
gi|4504255 H2A histone family, member Z [Homo sapiens]                139   8e-34
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     126   4e-30
gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]          114   2e-26
gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]          114   2e-26
gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]          114   2e-26

>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  251 bits (640), Expect = 1e-67
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKAKSK 129
           TESHKAKSK
Sbjct: 121 TESHKAKSK 129


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  244 bits (624), Expect = 1e-65
 Identities = 128/130 (98%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  244 bits (624), Expect = 1e-65
 Identities = 128/130 (98%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  243 bits (621), Expect = 2e-65
 Identities = 125/129 (96%), Positives = 126/129 (97%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGK RAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKAKSK 129
           TES K KSK
Sbjct: 121 TESQKTKSK 129


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  242 bits (618), Expect = 5e-65
 Identities = 126/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  241 bits (615), Expect = 1e-64
 Identities = 125/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  241 bits (615), Expect = 1e-64
 Identities = 125/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  240 bits (613), Expect = 2e-64
 Identities = 125/128 (97%), Positives = 127/128 (99%), Gaps = 1/128 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAK 127
           TES HKAK
Sbjct: 121 TESHHKAK 128


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  240 bits (612), Expect = 3e-64
 Identities = 124/130 (95%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  240 bits (612), Expect = 3e-64
 Identities = 124/130 (95%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HKAKSK 129
           TES HKAK K
Sbjct: 121 TESHHKAKGK 130


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  239 bits (611), Expect = 3e-64
 Identities = 122/125 (97%), Positives = 124/125 (99%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHK 125
           TESHK
Sbjct: 121 TESHK 125


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  239 bits (611), Expect = 3e-64
 Identities = 122/124 (98%), Positives = 124/124 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESH 124
           TESH
Sbjct: 121 TESH 124


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  237 bits (605), Expect = 2e-63
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 2/131 (1%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES--HKAKSK 129
           TES  HKA+SK
Sbjct: 121 TESHHHKAQSK 131


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  228 bits (580), Expect = 1e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES 123
           T +
Sbjct: 121 TSA 123


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/117 (66%), Positives = 93/117 (79%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVYMAAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/117 (66%), Positives = 93/117 (79%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVYMAAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/117 (66%), Positives = 93/117 (79%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVYMAAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/117 (66%), Positives = 93/117 (79%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVYMAAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  149 bits (375), Expect = 8e-37
 Identities = 82/129 (63%), Positives = 94/129 (72%), Gaps = 4/129 (3%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVYMAAV+EYL 
Sbjct: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117

Query: 121 TESHKAKSK 129
               K KS+
Sbjct: 118 -RGTKGKSE 125


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  140 bits (354), Expect = 2e-34
 Identities = 78/123 (63%), Positives = 92/123 (74%), Gaps = 2/123 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I   L+ KK + 
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGQQ 125

Query: 124 HKA 126
             A
Sbjct: 126 KTA 128


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  139 bits (349), Expect = 8e-34
 Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63
           GK  GKA+ KA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  126 bits (317), Expect = 4e-30
 Identities = 70/103 (67%), Positives = 80/103 (77%), Gaps = 2/103 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQG 106
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ K TIA G
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGG 108


>gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  114 bits (286), Expect = 2e-26
 Identities = 72/130 (55%), Positives = 80/130 (61%), Gaps = 20/130 (15%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLGKV I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH-KAKSK 129
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


>gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  114 bits (286), Expect = 2e-26
 Identities = 72/130 (55%), Positives = 80/130 (61%), Gaps = 20/130 (15%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLGKV I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH-KAKSK 129
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


>gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  114 bits (286), Expect = 2e-26
 Identities = 72/130 (55%), Positives = 80/130 (61%), Gaps = 20/130 (15%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLGKV I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESH-KAKSK 129
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,377,864
Number of Sequences: 37866
Number of extensions: 168878
Number of successful extensions: 562
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 488
Number of HSP's gapped (non-prelim): 69
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.