Search of human proteins with 24586679

Search of human proteins with 24586679

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24586679 histone cluster 1, H2ba [Homo sapiens]
         (127 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24586679 histone cluster 1, H2ba [Homo sapiens]                    243   3e-65
gi|4504259 histone cluster 1, H2bl [Homo sapiens]                     210   2e-55
gi|4504261 histone cluster 1, H2bn [Homo sapiens]                     209   5e-55
gi|10800140 histone cluster 1, H2bb [Homo sapiens]                    209   5e-55
gi|4504277 histone cluster 2, H2be [Homo sapiens]                     208   8e-55
gi|28173554 histone cluster 3, H2bb [Homo sapiens]                    208   8e-55
gi|10800138 histone cluster 1, H2bd [Homo sapiens]                    208   1e-54
gi|20336752 histone cluster 1, H2bd [Homo sapiens]                    208   1e-54
gi|21396484 histone cluster 1, H2be [Homo sapiens]                    208   1e-54
gi|4504265 histone cluster 1, H2bf [Homo sapiens]                     208   1e-54
gi|4504257 histone cluster 1, H2bg [Homo sapiens]                     208   1e-54
gi|21166389 histone cluster 1, H2bc [Homo sapiens]                    208   1e-54
gi|4504271 histone cluster 1, H2bi [Homo sapiens]                     208   1e-54
gi|20336754 histone cluster 1, H2bj [Homo sapiens]                    207   2e-54
gi|16306566 histone cluster 1, H2bo [Homo sapiens]                    207   2e-54
gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]         207   2e-54
gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]          207   2e-54
gi|18105048 histone cluster 1, H2bk [Homo sapiens]                    207   2e-54
gi|4504269 histone cluster 1, H2bh [Homo sapiens]                     207   2e-54
gi|4504263 histone cluster 1, H2bm [Homo sapiens]                     207   2e-54
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]    97   3e-21
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    97   3e-21
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    97   3e-21
gi|50897288 H2B histone family, member W, testis-specific [Homo ...    95   1e-20
gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene f...    38   0.002
gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene f...    38   0.002
gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene f...    38   0.002
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]    35   0.020
gi|4503381 down-regulator of transcription 1 [Homo sapiens]            33   0.045
gi|5901922 cell division cycle 37 protein [Homo sapiens]               28   1.5  

>gi|24586679 histone cluster 1, H2ba [Homo sapiens]
          Length = 127

 Score =  243 bits (620), Expect = 3e-65
 Identities = 127/127 (100%), Positives = 127/127 (100%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA
Sbjct: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 121 TKYTSSK 127


>gi|4504259 histone cluster 1, H2bl [Homo sapiens]
          Length = 126

 Score =  210 bits (535), Expect = 2e-55
 Identities = 109/127 (85%), Positives = 117/127 (92%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE++ K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPELA-KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIASEASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504261 histone cluster 1, H2bn [Homo sapiens]
          Length = 126

 Score =  209 bits (532), Expect = 5e-55
 Identities = 109/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  SK A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|10800140 histone cluster 1, H2bb [Homo sapiens]
          Length = 126

 Score =  209 bits (532), Expect = 5e-55
 Identities = 109/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  SK A   KKG KKA+ K QKK+GKKRKR+RKESYSIY+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504277 histone cluster 2, H2be [Homo sapiens]
          Length = 126

 Score =  208 bits (530), Expect = 8e-55
 Identities = 109/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYSIY+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|28173554 histone cluster 3, H2bb [Homo sapiens]
          Length = 126

 Score =  208 bits (530), Expect = 8e-55
 Identities = 109/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MP+  SK A   KKG KKAV K QKK+GKKRKR RKESYSIY+YKVLKQVHPDTGISSKA
Sbjct: 1   MPD-PSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIASEASRLAHY+KRSTI+SRE+QTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|10800138 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|20336752 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|21396484 histone cluster 1, H2be [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504265 histone cluster 1, H2bf [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504257 histone cluster 1, H2bg [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|21166389 histone cluster 1, H2bc [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504271 histone cluster 1, H2bi [Homo sapiens]
          Length = 126

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|20336754 histone cluster 1, H2bj [Homo sapiens]
          Length = 126

 Score =  207 bits (527), Expect = 2e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYSIY+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTS+K
Sbjct: 120 TKYTSAK 126


>gi|16306566 histone cluster 1, H2bo [Homo sapiens]
          Length = 126

 Score =  207 bits (527), Expect = 2e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MP+  +K A   KKG KKAV K QKK+GKKRKR+RKESYSIY+YKVLKQVHPDTGISSKA
Sbjct: 1   MPD-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]
          Length = 134

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MP+  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPD-PAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]
          Length = 126

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MP+  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPD-PAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|18105048 histone cluster 1, H2bk [Homo sapiens]
          Length = 126

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTS+K
Sbjct: 120 TKYTSAK 126


>gi|4504269 histone cluster 1, H2bh [Homo sapiens]
          Length = 126

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MP+  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPD-PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|4504263 histone cluster 1, H2bm [Homo sapiens]
          Length = 126

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60
           MPE   K A + KKG KKA+ K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPE-PVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59

Query: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119

Query: 121 TKYTSSK 127
           TKYTSSK
Sbjct: 120 TKYTSSK 126


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 49/120 (40%), Positives = 81/120 (67%)

Query: 3   EVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKAMS 62
           E     +T ++K  ++    ++++   +R  +  +S++ Y  +VLKQVH    +S +A+S
Sbjct: 118 EPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHXGLSLSQEAVS 177

Query: 63  IMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122
           +M+S + DI +RIA+EA +LAHY+KR TI+SR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 178 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 237


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 49/120 (40%), Positives = 81/120 (67%)

Query: 3   EVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKAMS 62
           E     +T ++K  ++    ++++   +R  +  +S++ Y  +VLKQVH    +S +A+S
Sbjct: 127 EPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVS 186

Query: 63  IMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122
           +M+S + DI +RIA+EA +LAHY+KR TI+SR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 187 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 49/120 (40%), Positives = 81/120 (67%)

Query: 3   EVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKAMS 62
           E     +T ++K  ++    ++++   +R  +  +S++ Y  +VLKQVH    +S +A+S
Sbjct: 127 EPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVS 186

Query: 63  IMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122
           +M+S + DI +RIA+EA +LAHY+KR TI+SR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 187 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|50897288 H2B histone family, member W, testis-specific [Homo
           sapiens]
          Length = 175

 Score = 95.1 bits (235), Expect = 1e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 11/117 (9%)

Query: 17  KKAVVKTQKKEGKKRKRTRK-----------ESYSIYIYKVLKQVHPDTGISSKAMSIMN 65
           K+A   T +K+ K+RKR R            +S++ Y  +VLKQVH    +S +A+S+M+
Sbjct: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107

Query: 66  SFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122
           S V DI +RIA+EA  LA  +KR TI++ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164


>gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 46 VLKQVHPDTGISSKAMSIMNSFVTDIFERIASEA 79
          VLKQ HPD   +   + IMN F+ DIFE I ++A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 46 VLKQVHPDTGISSKAMSIMNSFVTDIFERIASEA 79
          VLKQ HPD   +   + IMN F+ DIFE I ++A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 46 VLKQVHPDTGISSKAMSIMNSFVTDIFERIASEA 79
          VLKQ HPD   +   + IMN F+ DIFE I ++A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
          Length = 1104

 Score = 34.7 bits (78), Expect = 0.020
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 55  GISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVS 114
           G+   A++ +++ V+    RIA EA RL+    + T    EIQ+A+ ++L   LA H  +
Sbjct: 123 GLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCT--KYEIQSAMEIVLSWGLAAHCTA 180

Query: 115 EGTKAVTKYTSS 126
               A++ Y  S
Sbjct: 181 AALAALSLYNMS 192


>gi|4503381 down-regulator of transcription 1 [Homo sapiens]
          Length = 176

 Score = 33.5 bits (75), Expect = 0.045
 Identities = 16/61 (26%), Positives = 35/61 (57%)

Query: 43  IYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRL 102
           I K++K+  P+  +++ A  ++ +  T+    I+SEA+ + + S++ TIS   +  A+  
Sbjct: 18  INKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES 77

Query: 103 L 103
           L
Sbjct: 78  L 78


>gi|5901922 cell division cycle 37 protein [Homo sapiens]
          Length = 378

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 10  TISKKGFKKAVVKTQ-KKEGKKRKRTRKESYSIYIYKVLKQV 50
           T+SK GF K++V T+ +K  +  +  R++ +  ++ K  KQ+
Sbjct: 118 TLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQI 159


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.123    0.315 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,501,814
Number of Sequences: 37866
Number of extensions: 107953
Number of successful extensions: 569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 78
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.