Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 24308364
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308364 Yip1 interacting factor homolog B isoform 2 [Homo
sapiens]
(283 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224451038 Yip1 interacting factor homolog B isoform 2 [Homo s... 565 e-161
gi|224451034 Yip1 interacting factor homolog B isoform 6 [Homo s... 565 e-161
gi|24308364 Yip1 interacting factor homolog B isoform 2 [Homo sa... 565 e-161
gi|89191845 Yip1 interacting factor homolog B isoform 3 [Homo sa... 565 e-161
gi|89191850 Yip1 interacting factor homolog B isoform 4 [Homo sa... 565 e-161
gi|89191848 Yip1 interacting factor homolog B isoform 5 [Homo sa... 565 e-161
gi|224451040 Yip1 interacting factor homolog B isoform 7 [Homo s... 468 e-132
gi|170932464 Yip1 interacting factor homolog [Homo sapiens] 315 4e-86
gi|171460922 transmembrane protein 132D [Homo sapiens] 31 1.1
gi|148727259 solute carrier family 9 (sodium/hydrogen exchanger)... 30 1.8
gi|4885057 apelin receptor [Homo sapiens] 29 4.1
gi|83776600 aurora kinase B [Homo sapiens] 29 5.3
gi|42542386 solute carrier family 22 (organic anion/cation trans... 28 7.0
gi|23397574 sorting nexin 33 [Homo sapiens] 28 7.0
gi|4503999 gastric inhibitory polypeptide receptor [Homo sapiens] 28 9.1
gi|15088795 phosphatidylinositol glycan anchor biosynthesis, cla... 28 9.1
gi|122937456 T-box 18 [Homo sapiens] 28 9.1
gi|189339239 hypothetical protein LOC55009 [Homo sapiens] 28 9.1
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 28 9.1
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 28 9.1
>gi|224451038 Yip1 interacting factor homolog B isoform 2 [Homo
sapiens]
Length = 283
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
>gi|224451034 Yip1 interacting factor homolog B isoform 6 [Homo
sapiens]
Length = 297
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 15 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 74
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 75 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 134
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 135 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 194
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 195 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 254
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 255 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 297
>gi|24308364 Yip1 interacting factor homolog B isoform 2 [Homo
sapiens]
Length = 283
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
>gi|89191845 Yip1 interacting factor homolog B isoform 3 [Homo
sapiens]
Length = 299
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 17 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 76
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 77 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 136
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 137 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 196
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 197 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 256
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 257 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 299
>gi|89191850 Yip1 interacting factor homolog B isoform 4 [Homo
sapiens]
Length = 311
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 29 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 88
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 89 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 148
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 149 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 208
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 209 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 268
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 269 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 311
>gi|89191848 Yip1 interacting factor homolog B isoform 5 [Homo
sapiens]
Length = 314
Score = 565 bits (1457), Expect = e-161
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 32 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 91
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 92 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 151
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 152 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 211
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 240
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI
Sbjct: 212 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKI 271
Query: 241 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR
Sbjct: 272 LADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 314
>gi|224451040 Yip1 interacting factor homolog B isoform 7 [Homo
sapiens]
Length = 291
Score = 468 bits (1204), Expect = e-132
Identities = 233/236 (98%), Positives = 233/236 (98%)
Query: 1 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 60
MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ
Sbjct: 29 MADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQ 88
Query: 61 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 120
GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD
Sbjct: 89 GKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFD 148
Query: 121 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 180
VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV
Sbjct: 149 VNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLV 208
Query: 181 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTL 236
TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFM L
Sbjct: 209 TVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMFPLL 264
>gi|170932464 Yip1 interacting factor homolog [Homo sapiens]
Length = 293
Score = 315 bits (806), Expect = 4e-86
Identities = 163/284 (57%), Positives = 207/284 (72%), Gaps = 14/284 (4%)
Query: 3 DPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAA---FLADPVSNMAMAYGSSLAA 59
DP LFDDTS GY +Q PGG YPA + L DP++N+AMAYGSS+A+
Sbjct: 21 DPPPLFDDTSG----GYSSQ--PGG--YPATGADVAFSVNHLLGDPMANVAMAYGSSIAS 72
Query: 60 QGKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRF 119
GK++V K + RF+ ++KLKY+FAVDT YV +KLGLL FPY HQ+WEVQY +D P+ PR
Sbjct: 73 HGKDMVHKELHRFVSVSKLKYFFAVDTAYVAKKLGLLVFPYTHQNWEVQYSRDAPLPPRQ 132
Query: 120 DVNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYL 179
D+NAPDLYIP MAFITYVL+AG+ALG Q RFSP++LGL AS+AL W+ +EVLA+LL LYL
Sbjct: 133 DLNAPDLYIPTMAFITYVLLAGMALGIQKRFSPEVLGLCASTALVWVVMEVLALLLGLYL 192
Query: 180 VTVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLK 239
TV +DL+T L+A+ GYKYVGMI VL GLLFG GYY+ L W A+ F++R+LR
Sbjct: 193 ATVRSDLSTFHLLAYSGYKYVGMILSVLTGLLFGSDGYYVALAWTSSALMYFIVRSLRTA 252
Query: 240 ILADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR 283
L + G PV R +L++YLT+ AA QP+++YWLTFHLVR
Sbjct: 253 ALGPDSMGG-PV--PRQRLQLYLTLGAAAFQPLIIYWLTFHLVR 293
>gi|171460922 transmembrane protein 132D [Homo sapiens]
Length = 1099
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 178 YLVTVNTDLTTIDLVAFLGYKYVGMIGGVLM----GLLFGKIGYYLVLGWCCVAIFVFMI 233
+L T+ +DLT+ L M G LM GL +IG Y +LG C+AI VF+I
Sbjct: 877 HLQTIPSDLTSFPAQVDLPRSNGEMDGNDLMQASKGLSDLEIGMYALLGVFCLAILVFLI 936
>gi|148727259 solute carrier family 9 (sodium/hydrogen exchanger),
member 4 [Homo sapiens]
Length = 798
Score = 30.4 bits (67), Expect = 1.8
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 139 VAGLALGTQDRFSPDLLGLQASSALA--WLTLEVLAILLSLYLVTVNTDLTTIDLVAFLG 196
VA LA+ + R + L + AL +T+ + +L++ + D+ T+D++A
Sbjct: 209 VAVLAVFEEARVNEQLYMMIFGEALLNDGITVVLYNMLIAFTKMHKFEDIETVDILAGCA 268
Query: 197 YKYVGMIGGVLMGLLFGKIGYYL 219
V +GGVL G++FG I ++
Sbjct: 269 RFIVVGLGGVLFGIVFGFISAFI 291
>gi|4885057 apelin receptor [Homo sapiens]
Length = 380
Score = 29.3 bits (64), Expect = 4.1
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 155 LGLQASSALAWLTLEVLAILLSLYLVTVNT--DL-TTIDLVAFLGYKYVGMIGG-----V 206
L L+ S A+A L VLA LL++ ++ + T DL T + ++ Y V + V
Sbjct: 140 LRLRVSGAVATAVLWVLAALLAMPVMVLRTTGDLENTTKVQCYMDYSMVATVSSEWAWEV 199
Query: 207 LMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKILADAAAEGVPVRGARNQLRMYLTMAV 266
+G+ +G+ +V + + F+ +T+ + + G R + R+ L++ V
Sbjct: 200 GLGVSSTTVGF-VVPFTIMLTCYFFIAQTIAGHFRKER------IEGLRKRRRL-LSIIV 251
Query: 267 AAAQPMLMYWLTFHLVR 283
+ W+ +HLV+
Sbjct: 252 VLVVTFALCWMPYHLVK 268
>gi|83776600 aurora kinase B [Homo sapiens]
Length = 344
Score = 28.9 bits (63), Expect = 5.3
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 19 YGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGS-----SLAAQGKELVDKNIDRFI 73
YG Q AP GL S P +PV+ A+ S AA G+++++ +
Sbjct: 12 YGRQTAPSGL-----STLPQRVLRKEPVTPSALVLMSRSNVQPTAAPGQKVMENSSGTPD 66
Query: 74 PITKLKYYFAVDTMYVGRKLG 94
+T+ +F +D +GR LG
Sbjct: 67 ILTR---HFTIDDFEIGRPLG 84
>gi|42542386 solute carrier family 22 (organic anion/cation
transporter), member 9 [Homo sapiens]
Length = 553
Score = 28.5 bits (62), Expect = 7.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 179 LVTVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFV 230
LV + LT++ F+ M+GG+L G L + G VL WC + + +
Sbjct: 137 LVCDSQSLTSVAKFVFMAGM---MVGGILGGHLSDRFGRRFVLRWCYLQVAI 185
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 28.5 bits (62), Expect = 7.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 25 PGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQGKELVDKNIDRF 72
P LSYP A P+ H AF P S +A+ +V +N++RF
Sbjct: 142 PLNLSYPGAYPSQHMAFRPKPPLE---RQDSLASAKRGSVVGRNLNRF 186
>gi|4503999 gastric inhibitory polypeptide receptor [Homo sapiens]
Length = 466
Score = 28.1 bits (61), Expect = 9.1
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 127 YIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLVT---VN 183
YI F +++L A L ++DR P ALA L + LA + +VT V
Sbjct: 171 YIHINLFTSFMLRAAAIL-SRDRLLPRPGPYLGDQALA-LWNQALAACRTAQIVTQYCVG 228
Query: 184 TDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFV 230
+ T + + + + ++GG G YYL+LGW A+FV
Sbjct: 229 ANYTWLLVEGVYLHSLLVLVGGSEEG----HFRYYLLLGWGAPALFV 271
>gi|15088795 phosphatidylinositol glycan anchor biosynthesis, class
S [Homo sapiens]
Length = 555
Score = 28.1 bits (61), Expect = 9.1
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 175 LSLYLVTVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIR 234
L++Y+++ ++ L D+++++G K ++ G++ F IG +V V
Sbjct: 142 LTVYVISEHSSLLPQDMMSYIGPKRTAVVRGIMHREAFNIIGRRIVQ--------VAQAM 193
Query: 235 TLRLKILADAAAEGVP 250
+L +LA A A+ +P
Sbjct: 194 SLTEDVLAAALADHLP 209
>gi|122937456 T-box 18 [Homo sapiens]
Length = 607
Score = 28.1 bits (61), Expect = 9.1
Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 25/128 (19%)
Query: 20 GAQRAPGGLSYPAASPTPHAA-FLADPVSNMAMAYGSSLAAQGKEL------------VD 66
G Q+ L+ P SP A LA P + + + QG EL +
Sbjct: 103 GFQQGASPLASPGGSPKGSPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIIT 162
Query: 67 KNIDRFIPITKLK---------YYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAP 117
K R P ++K YY A+D + V K + Y W V D+PV P
Sbjct: 163 KAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKR--YRYVYHSSKWMVAGNADSPVPP 220
Query: 118 RFDVNAPD 125
R ++ PD
Sbjct: 221 RVYIH-PD 227
>gi|189339239 hypothetical protein LOC55009 [Homo sapiens]
Length = 132
Score = 28.1 bits (61), Expect = 9.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 217 YYLVLGWCCVAIFVFMIRTLRLK 239
+Y++LG+C + F+IR RLK
Sbjct: 74 FYVILGFCGLTALYFLIRAFRLK 96
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 28.1 bits (61), Expect = 9.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 214 KIGYYLVLGWCCVAIFVFMI 233
++G Y +LG CVAIF+F++
Sbjct: 848 ELGMYALLGVFCVAIFIFLV 867
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 28.1 bits (61), Expect = 9.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 214 KIGYYLVLGWCCVAIFVFMI 233
++G Y +LG CVAIF+F++
Sbjct: 847 ELGMYALLGVFCVAIFIFLV 866
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.140 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,488,998
Number of Sequences: 37866
Number of extensions: 383515
Number of successful extensions: 1554
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1539
Number of HSP's gapped (non-prelim): 21
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.