Guide to the Human Genome
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Name: ABCG8 Sequence: fasta or formatted (673aa) NCBI GI: 11967971
Description:

ATP-binding cassette sub-family G member 8

Referenced in:

ATP-binding Cassette Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         46           4
 C cysteine            2.1         14           2
 D aspartate           4.6         31           2
 E glutamate           3.9         26           2
 F phenylalanine       5.3         36           2
 G glycine             6.8         46           2
 H histidine           1.6         11           1
 I isoleucine          5.9         40           3
 K lysine              3.4         23           1
 L leucine            13.4         90           2
 M methionine          3.1         21           1
 N asparagine          3.1         21           1
 P proline             4.9         33           1
 Q glutamine           4.9         33           2
 R arginine            5.9         40           3
 S serine              8.0         54           2
 T threonine           5.2         35           2
 V valine              5.3         36           2
 W tryptophan          1.6         11           1
 Y tyrosine            3.9         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette sub-family G member 8 
ABCG5                 0.174   ATP-binding cassette sub-family G member 5 
ABCG2                 0.159   ATP-binding cassette, sub-family G, member 2 
ABCG1                 0.151   ATP-binding cassette sub-family G member 1 isoform 7...
ABCG1                 0.151   ATP-binding cassette sub-family G member 1 isoform 6...
ABCG1                 0.151   ATP-binding cassette sub-family G member 1 isoform 5...
ABCG1                 0.151   ATP-binding cassette sub-family G member 1 isoform 3...
ABCG1                 0.151   ATP-binding cassette sub-family G member 1 isoform 2...
ABCG1                 0.150   ATP-binding cassette sub-family G member 1 isoform 4...
ABCG4                 0.139   ATP-binding cassette, subfamily G, member 4 
ABCG4                 0.139   ATP-binding cassette, subfamily G, member 4 
ABCA10                0.050   ATP-binding cassette, sub-family A, member 10 [Homo...
ABCA3                 0.050   ATP-binding cassette, sub-family A member 3 
ABCA6                 0.047   ATP-binding cassette, sub-family A, member 6 
ABCA13                0.044   ATP binding cassette, sub-family A (ABC1), member 13...
ABCA9                 0.044   ATP-binding cassette, sub-family A, member 9 
ABCA5                 0.043   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.043   ATP-binding cassette, sub-family A , member 5 
ABCA4                 0.042   ATP-binding cassette, sub-family A member 4 
ABCA8                 0.041   ATP-binding cassette, sub-family A member 8 
ABCA2                 0.039   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA2                 0.039   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA12                0.039   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA12                0.039   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA1                 0.036   ATP-binding cassette, sub-family A member 1 
ABCB10                0.035   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB4                 0.035   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.035   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB4                 0.035   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB1                 0.033   ATP-binding cassette, subfamily B, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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